BAC Information

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BAC

Clone NameB6Ng01-144D08
Chromosome7 (Build37)
Map Location 78,025,922 - 78,196,169
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144D08.bB6Ng01-144D08.g
ACCDH941946DH941947
length1,090380
definitionDH941946|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D08, 5' end.DH941947|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,195,075 - 78,196,169)(78,025,922 - 78,026,311)
sequence
gaattctctgtagccttttctgttcaacccaggatatggtcgggttcact
ttagattttcccaagcatttgctctttggagaatgctttcattttaaatt
atttactcaataagttagaatgatttgtttcataattacttcccttctct
agtggtctctaatttcctgtaagggcagaggcctagcccctcttgtatac
tgttctcagtattgctcagtccacatctggaacatagaaggcactctgta
atgttgagtaactacctaactgatactatcacagcaacggtttgtggatg
tggtctgtattacagccaattgcctcttcgattttacccagataccctca
agttagattgctttgttttagaacaaagtaatgtgagtgccacagagtca
aaccaaagactcagttttgataacttgttgaaggagttgtgtcagctaca
ggcaggtgtagctggagtgtgtcgggggaggggggtagctacgatatatt
tttatgtgctcatgattattcaatcattaaaagagtgaacagtacattcc
taagatctcttgggctgccagctccacctccctttctagagactcctaga
atgttgagaaggataatttatatcatattacccatgagatatcagtggtc
ccaggacaacctgattatatacaattttgcatattcatattacccctcac
actcttttgttctccactccctcaggaccactaccctgagtcctccttac
ctattgccctggggcctctgtagtctattttccttgagcagtggccgtga
tgatatttgagtatttcaggaggacctgtagctctggtcttgtgggagta
cacattccagatcttcgaagtaggaatactgagggagtaagcatgggacg
ctggacttcttgcaagttttgcttatttctgttaaatcacctacgcgata
tctgcttaagcaactggaactctagagagggccaatgaagctatgcagat
gatagtgcgtggctaatgatgaagccttcactatcacttttttctgaaga
ttaatccggggggcaactccgaagatggtttctctgtact
cttaagtaactggagaaaaactactggaggaaaatatagtgatttgtctg
tcattgtgaccaattacctgcgaaagttaacttcagaggaaaaggtaact
gtcatccatggttttagaaggtttatttcatggtgttggcttgaatgtgg
ggcagcagagttcatggtgtgaacacagcaagaaaacatgttgaaattgt
ggctgaaaacgagagagagagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagtttcccctttggtgtcatatcctaa
tatctcacatcaatacaggttttcaaaatcccgattagctttcacaagga
cctctatatttatagaactactgattgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78195075_78196169
seq2: B6Ng01-144D08.b_41_1130 (reverse)

seq1  AGTACAGAGAAA-CATTTCTGGAGTTGCTCCCACGATTAAAATCTTCAG-  48
      |||||||||||| ||| |  |||||||| |||  ||||  ||||||||| 
seq2  AGTACAGAGAAACCATCTTCGGAGTTGCCCCCCGGATT--AATCTTCAGA  48

seq1  AAAAAGTGTTAAGTGGAAGGCTTCATCATTAG-CACGCTACTATCATCTG  97
      |||||||| | ||| ||||||||||||||||| ||||| |||||||||||
seq2  AAAAAGTGAT-AGT-GAAGGCTTCATCATTAGCCACGC-ACTATCATCTG  95

seq1  CATTGCTTCATTTGGCCCTCTCTAGAGTTCATGTTTGCCTAAAGCAGATA  147
      ||| |||||| |||||||||||||||||||  |||   || |||||||||
seq2  CATAGCTTCA-TTGGCCCTCTCTAGAGTTCCAGTT--GCTTAAGCAGATA  142

seq1  TCGCCGTAGGTGATTTAACAGAAATAAGCAAAAACTTGC-AGAAGT-CAG  195
      ||| ||||||||||||||||||||||||| ||||||||| |||||| |||
seq2  TCG-CGTAGGTGATTTAACAGAAATAAGC-AAAACTTGCAAGAAGTCCAG  190

seq1  CGTCCCATGCTTACTCCCTCAGTATTCCTACTTCGAAGATCTGGAATGTG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCATGCTTACTCCCTCAGTATTCCTACTTCGAAGATCTGGAATGTG  240

seq1  TACTCCCACAAGACCAGAGCTACAGGTCCTCCTGAAATACTCAAATATCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCCACAAGACCAGAGCTACAGGTCCTCCTGAAATACTCAAATATCA  290

seq1  TCACGGCCACTGCTCAAGGAAAATAGACTACAGAGGCCCCAGGGCAATAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGCCACTGCTCAAGGAAAATAGACTACAGAGGCCCCAGGGCAATAG  340

seq1  GTAAGGAGGACTCAGGGTAGTGGTCCTGAGGGAGTGGAGAACAAAAGAGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGAGGACTCAGGGTAGTGGTCCTGAGGGAGTGGAGAACAAAAGAGT  390

seq1  GTGAGGGGTAATATGAATATGCAAAATTGTATATAATCAGGTTGTCCTGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGGTAATATGAATATGCAAAATTGTATATAATCAGGTTGTCCTGG  440

seq1  GACCACTGATATCTCATGGGTAATATGATATAAATTATCCTTCTCAACAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTGATATCTCATGGGTAATATGATATAAATTATCCTTCTCAACAT  490

seq1  TCTAGGAGTCTCTAGAAAGGGAGGTGGAGCTGGCAGCCCAAGAGATCTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGTCTCTAGAAAGGGAGGTGGAGCTGGCAGCCCAAGAGATCTTA  540

seq1  GGAATGTACTGTTCACTCTTTTAATGATTGAATAATCATGAGCACATAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTACTGTTCACTCTTTTAATGATTGAATAATCATGAGCACATAAA  590

seq1  AATATATCGTAGCTACCCCCCTCCCCCGACACACTCCAGCTACACCTGCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATCGTAGCTACCCCCCTCCCCCGACACACTCCAGCTACACCTGCC  640

seq1  TGTAGCTGACACAACTCCTTCAACAAGTTATCAAAACTGAGTCTTTGGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGACACAACTCCTTCAACAAGTTATCAAAACTGAGTCTTTGGTT  690

seq1  TGACTCTGTGGCACTCACATTACTTTGTTCTAAAACAAAGCAATCTAACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGTGGCACTCACATTACTTTGTTCTAAAACAAAGCAATCTAACT  740

seq1  TGAGGGTATCTGGGTAAAATCGAAGAGGCAATTGGCTGTAATACAGACCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTATCTGGGTAAAATCGAAGAGGCAATTGGCTGTAATACAGACCA  790

seq1  CATCCACAAACCGTTGCTGTGATAGTATCAGTTAGGTAGTTACTCAACAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAAACCGTTGCTGTGATAGTATCAGTTAGGTAGTTACTCAACAT  840

seq1  TACAGAGTGCCTTCTATGTTCCAGATGTGGACTGAGCAATACTGAGAACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTGCCTTCTATGTTCCAGATGTGGACTGAGCAATACTGAGAACA  890

seq1  GTATACAAGAGGGGCTAGGCCTCTGCCCTTACAGGAAATTAGAGACCACT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAAGAGGGGCTAGGCCTCTGCCCTTACAGGAAATTAGAGACCACT  940

seq1  AGAGAAGGGAAGTAATTATGAAACAAATCATTCTAACTTATTGAGTAAAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGGAAGTAATTATGAAACAAATCATTCTAACTTATTGAGTAAAT  990

seq1  AATTTAAAATGAAAGCATTCTCCAAAGAGCAAATGCTTGGGAAAATCTAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAATGAAAGCATTCTCCAAAGAGCAAATGCTTGGGAAAATCTAA  1040

seq1  AGTGAACCCGACCATATCCTGGGTTGAACAGAAAAGGCTACAGAGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACCCGACCATATCCTGGGTTGAACAGAAAAGGCTACAGAGAATTC  1090

seq1: chr7_78025922_78026311
seq2: B6Ng01-144D08.g_65_450

seq1  GAATTCCTTAAGTAACTGGAGAAAAACTACTGGAGGAAAATATAGTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGTAACTGGAGAAAAACTACTGGAGGAAAATATAGTGATT  50

seq1  TGTCTGTCATTGTGACCAATTACCTGCGAAAGTTAACTTCAGAGGAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCATTGTGACCAATTACCTGCGAAAGTTAACTTCAGAGGAAAAG  100

seq1  GTAACTGTCATCCATGGTTTTAGAAGGTTTATTTCATGGTGTTGGCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGTCATCCATGGTTTTAGAAGGTTTATTTCATGGTGTTGGCTTGA  150

seq1  ATGTGGGGCAGCAGAGTTCATGGTGTGAACACAGCAAGAAAACATGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGGCAGCAGAGTTCATGGTGTGAACACAGCAAGAAAACATGTTGA  200

seq1  AATTGTGGCTGAAAACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGGCTGAAAACGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  250

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAAGGGGTTGGTG  300
      |||||||||||||||||||||||||||||||     |       ||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG-----TTTCCCCTTTGGTG  295

seq1  TCATATCCTAATATCTCACATAAATACAGGTTTTCAAAAGCCCAATTAGC  350
      ||||||||||||||||||||| ||||||||||||||||| ||| ||||||
seq2  TCATATCCTAATATCTCACATCAATACAGGTTTTCAAAATCCCGATTAGC  345

seq1  TTTCACTAGGCCCTCTATA-GTAAAGTACTACTGATTGATT  390
      |||||| ||| ||||||||  || || ||||||||||||||
seq2  TTTCACAAGGACCTCTATATTTATAGAACTACTGATTGATT  386