BAC Information

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BAC

Clone NameB6Ng01-145A02
Chromosome13 (Build37)7 (Build37)
Map Location 102,426,433 - 102,427,11468,331,966 - 68,332,486
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneTaf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5, LOC619865, LOC619917, EG619937, 4933416M06Rik, LOC100039971, LOC100039983
Downstream genePik3r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145A02.bB6Ng01-145A02.g
ACCDH942532DH942533
length682946
definitionDH942532|Mus musculus domesticus DNA, BAC clone: B6Ng01-145A02, 5' end.DH942533|Mus musculus domesticus DNA, BAC clone: B6Ng01-145A02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,426,433 - 102,427,114)(68,331,966 - 68,332,486)
sequence
gaattctttagaactgtatattaaatacacaaaaatgcacattcaagaac
tgaaagcgaatgcctgtaaagactgggacagtgagttgtgtgtgtgtgtg
tgtgtgtatacacgtacatgcttggaagttgttagttttatttttccaga
gtctaaactctaatgttttattataaactttcttgaagcagaatgtcatg
atgttaagtgtgttgattctaaataaaactaaacaagagttcaaatttga
aagccactgtgaagaaactctgggagcttggggagtttcttctggtctgc
ataacgtcagcacaggagagtgacaaggacaggactcagctcatgagggt
gcccagttaagtgaccatgtcctggtaagcccttagttagaagcctgcca
tgtaggaaacacccagggcatcttgggcatcagtatctcacttttataat
tatgcctgtgtattactttggtaaggaaaaaaataaaaataaaagaacgc
agggagagcaaacagagccttgtgactagggtgtgggagagaggtgtcct
agcatgaaactgatgctgcgtcctggcttactgtgatcactaaagggcaa
caaatgagttgtgatgcttgtgaggacgccaagaggaaatgaagaatgat
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtat
gaattccttgatccttttgaacttgagctttgtacaaggagataagaatg
gagtggtttgcattgttctccatgctaacctccagttgagccagcacaat
ttgttgaaaatgctatcactggatgattttagctcctttgttaaagatca
agtgaccagagatatacaggttcatttctgggtcttcaattctattccat
tgatctacctgcctgtcactgtaccagtaccatgctgtttttatcactac
tgctctgtagtacagcttgaggtcaggcatggtgattctcccagatgttc
ttttattgttgagaatagttttcgctattctggattttttgttattccaa
atgaacttgcaaattgctccttcttactctatgaagaattgatttggaat
ttttttatgggaattgcattgaatctgtagattgctttcagcaagatggc
catttttactatattaatcctgccaatccatgagcatgggagatctttcc
ctcttctgagatcttcaatttctttcttcagagacttgaagttcttgtca
tacagatctttcacttgcttggttagagtcacaccaggatattttttatt
atttgtgactattgtgaaaggtgttgttttactaatttctttttcagcct
gtttatcctttgtgtagagaaaggtcactgatttgtttgagttaatttta
tatccagctacttcaccgaagtttaggagttctttggtggattttttggg
tcccttaagtacactatcatatcatctgcaaatagtgatattttgacttc
ttcctttccagtttgtatccctttgacctccttttgttgtctaattgttt
ggctaggacttcaggtactgtattgaacaggtagggagagagtggacagt
cttgtctagtctctgattttagtggggattgcttcaagtttctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102426433_102427114
seq2: B6Ng01-145A02.b_37_718

seq1  GAATTCTTTAGAACTGTATATTAAATACACAAAAATGCACATTCAAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGAACTGTATATTAAATACACAAAAATGCACATTCAAGAAC  50

seq1  TGAAAGCGAATGCCTGTAAAGACTGGGACAGTGAGTTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCGAATGCCTGTAAAGACTGGGACAGTGAGTTGTGTGTGTGTGTG  100

seq1  TGTGTGTATACACGTACATGCTTGGAAGTTGTTAGTTTTATTTTTCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATACACGTACATGCTTGGAAGTTGTTAGTTTTATTTTTCCAGA  150

seq1  GTCTAAACTCTAATGTTTTATTATAAACTTTCTTGAAGCAGAATGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAACTCTAATGTTTTATTATAAACTTTCTTGAAGCAGAATGTCATG  200

seq1  ATGTTAAGTGTGTTGATTCTAAATAAAACTAAACAAGAGTTCAAATTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGTGTGTTGATTCTAAATAAAACTAAACAAGAGTTCAAATTTGA  250

seq1  AAGCCACTGTGAAGAAACTCTGGGAGCTTGGGGAGTTTCTTCTGGTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACTGTGAAGAAACTCTGGGAGCTTGGGGAGTTTCTTCTGGTCTGC  300

seq1  ATAACGTCAGCACAGGAGAGTGACAAGGACAGGACTCAGCTCATGAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGTCAGCACAGGAGAGTGACAAGGACAGGACTCAGCTCATGAGGGT  350

seq1  GCCCAGTTAAGTGACCATGTCCTGGTAAGCCCTTAGTTAGAAGCCTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTTAAGTGACCATGTCCTGGTAAGCCCTTAGTTAGAAGCCTGCCA  400

seq1  TGTAGGAAACACCCAGGGCATCTTGGGCATCAGTATCTCACTTTTATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAAACACCCAGGGCATCTTGGGCATCAGTATCTCACTTTTATAAT  450

seq1  TATGCCTGTGTATTACTTTGGTAAGGAAAAAAATAAAAATAAAAGAACGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTGTGTATTACTTTGGTAAGGAAAAAAATAAAAATAAAAGAACGC  500

seq1  AGGGAGAGCAAACAGAGCCTTGTGACTAGGGTGTGGGAGAGAGGTGTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGCAAACAGAGCCTTGTGACTAGGGTGTGGGAGAGAGGTGTCCT  550

seq1  AGCATGAAACTGATGCTGCGTCCTGGCTTACTGTGATCACTAAAGGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAACTGATGCTGCGTCCTGGCTTACTGTGATCACTAAAGGGCAA  600

seq1  CAAATGAGTTGTGATGCTTGTGAGGACGCCAAGAGGAAATGAAGAATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGTTGTGATGCTTGTGAGGACGCCAAGAGGAAATGAAGAATGAT  650

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  682
      ||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAT  682

seq1: chr7_68331966_68332486
seq2: B6Ng01-145A02.g_498_1002 (reverse)

seq1  GAAGCAAT-CCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTC  49
      |||||||| |||||||||||||| ||||||||||| ||| ||||| ||||
seq2  GAAGCAATCCCCACTAAAATCAGAGACTAGACAAGACTGTCCACTCTCTC  50

seq1  CCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAA  99
      ||||||| ||||| | ||||| ||||||  |||||| | ||||| |||||
seq2  CCTACCTGTTCAATACAGTACCTGAAGTCCTAGCCA-AACAATTAGACAA  99

seq1  CAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATC  149
      ||||||||| |||| |||||||||| |||||| || ||||||||||||||
seq2  CAAAAGGAGGTCAAAGGGATACAAACTGGAAAGGAAGAAGTCAAAATATC  149

seq1  ACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCA  199
      ||| |||||||||||||||||||| ||  |||| ||||| ||||| ||||
seq2  ACTATTTGCAGATGATATGATAGTGTACTTAAGGGACCC-AAAAAATCCA  198

seq1  CCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATAT  249
      ||| ||||||||||||            ||||||||||||||||||||||
seq2  CCAAAGAACTCCTAAA------------CTTCGGTGAAGTAGCTGGATAT  236

seq1  AAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACA  299
      ||||||||||||||||| ||| || ||||||||||||||||| |||||||
seq2  AAAATTAACTCAAACAAATCAGTGACCTTTCTCTACACAAAGGATAAACA  286

seq1  GGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATA  349
      |||||| |||||||||||  |||||||||| ||| |||||||||||||||
seq2  GGCTGAAAAAGAAATTAGTAAAACAACACCTTTCACAATAGTCACAAATA  336

seq1  ATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTAT  399
      ||| ||||||||  || ||||||||||| ||| |||||||||||||||||
seq2  ATAAAAAATATCCTGGTGTGACTCTAACCAAGCAAGTGAAAGATCTGTAT  386

seq1  GATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAG  449
      || || |||||||||||||||||||||||||||   ||||||||||||||
seq2  GACAAGAACTTCAAGTCTCTGAAGAAAGAAATT---GAAGATCTCAGAAG  433

seq1  ATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATATTGTAAAAA  499
      | |||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  AGGGAAAGATCTCCCATGCTCATGGATTGGCAGGATTAATATAGTAAAAA  483

seq1  TGGCTATCTTGCCAAAAGCAAT  521
      |||| |||||||  ||||||||
seq2  TGGCCATCTTGCTGAAAGCAAT  505