BAC Information

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BAC

Clone NameB6Ng01-145F01
Chromosome7 (Build37)
Map Location 84,337,933 - 84,415,007
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC434200, EG244071
Downstream geneA330068G13Rik, Ntrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145F01.bB6Ng01-145F01.g
ACCDH942751DH942752
length1,0211,143
definitionDH942751|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F01, 5' end.DH942752|Mus musculus domesticus DNA, BAC clone: B6Ng01-145F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,337,933 - 84,338,870)(84,413,860 - 84,415,007)
sequence
gaattcattttaaaacaattctgatatacatataagtttatcatttagta
gacattaattcaatttgcatattaatgagatagctttgcttaattatatt
aacaaaagtaattaaattgactgaatatttggtatttcaggaagtagaac
acttcacatacactctaaaaactgagtgcaaagggcccatactgtgtgtt
tagaaagaagactgagtgacatcacacagtgcaaaacagaagagatctac
cacaaactccttggacttattgtggttttgatttctaattgatattatca
ttgtgcagtcacagaatttttaatgttgacacacctttcaagacctcagt
attcagacatgcaacctcacagtcatgacccaaagctttagaagttaaat
tttcaataaaaaactgatttaggatatctatttctataacattgatcttt
gacaagggagctaaaaccatccaatggaaaaaaaaccagtattttcaaca
aatggtgctggcataactggcagttatcatatagaagaatgcgaattgat
ccattcctatctcattgtactaaggtcaaatctaagtggattaagtaact
ccacataaaaccagagacaatgaaacttatagaggagaaagtggggaaaa
gcctcgagatatgggcacaaagggaaaaattcctgattagaacagcaatg
gcttgtgctgtatgattgagaatcgacaaatgggacctcataaaataggc
ttctgtaaggcaaaagacactgtcaataacgcaaaaaggccaccaacaga
ttgggaaaggatctttacctatcctaaatcagataggggactaatatcca
atatataaagaactcaagaaagtggactccagaaaatcaaataaccccat
taaaaagtggggcttcagagctaaacaaagatttctcacctgagaatact
gaatggctgagaagcacctgaaaaaatgttcaacatccttaatcattgtg
atatgcaaataaacaaacctg
gaattcatttaggttattatttgtagtcagatgtgcagatagagtgtttt
tagcctgaaatgccctccacagactcaaagcatgtgaatacagctccaag
taagggcactgttttgtaaggttgcaaaaacatttgatggcagaagtcac
tgggatgagatcttgaaggttctacccatgtctcatttcagttactctgt
ctttcttgggtggacacacaggaacagtgataggcacacattttttactg
ctgttacctgggaactgatacagtattttcccaggcatgatggaacacac
tctgagattattacaggattactttttaaatatctctttcctcaagttac
tctgtcattaattttccctcgaatcaacaagaaaaataactaagacagta
gtaaagaatcaatttgggactgagatagatgggggctgatgactgttcca
gtttttcaggtgcctctatatgaaatcttggggaatcgacacaagaccca
acaccttaaagttctatgaactacaatttatccatttcacagcagaaagt
tgctgatggctctggtgttcttagcccccatgcatcggtttttgtttttt
tgtttttgtttttttttttctatttttaacctttgcatcttttacatttt
ggcaaattttaaacatccaaaaggataccgggagtgataaagactaacaa
ccacatttacagtaactcaaaactttaataaacatgcatttgaaaggtca
tcaaattctttctatgttttaccaaagatagcattatctaagttgtatgt
tcatgtcagtattttttccaaaattatccaagtgatggatatctctattt
ttaaatgtttaatgtaggggacatgttaaatcccaaaatagttttttgta
aagcaataacaatacctagtatatgcctgatgttattatataacacatac
acatagataataaagcaaatgtatcagtgttataataacacacttaccaa
agcaacaggtctcatcacagaaaatttattcaactacttgatcacttacg
tgtatagttaaaatgtccaaatccatcatctatgattctatccatcttca
ccaattcaataaatgtattttgtgtcatggccattggggcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_84337933_84338870
seq2: B6Ng01-145F01.b_44_982

seq1  GAATTCATTTTAAAACAATTCTGATATACATATAAGTTTATCATTTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAAAACAATTCTGATATACATATAAGTTTATCATTTAGTA  50

seq1  GACATTAATTCAATTTGCATATTAATGAGATAGCTTTGCTTAATTATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTAATTCAATTTGCATATTAATGAGATAGCTTTGCTTAATTATATT  100

seq1  AACAAAAGTAATTAAATTGACTGAATATTTGGTATTTCAGGAAGTAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAGTAATTAAATTGACTGAATATTTGGTATTTCAGGAAGTAGAAC  150

seq1  ACTTCACATACACTCTAAAAACTGAGTGCAAAGGGCCCATACTGTGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACATACACTCTAAAAACTGAGTGCAAAGGGCCCATACTGTGTGTT  200

seq1  TAGAAAGAAGACTGAGTGACATCACACAGTGCAAAACAGAAGAGATCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAAGACTGAGTGACATCACACAGTGCAAAACAGAAGAGATCTAC  250

seq1  CACAAACTCCTTGGACTTATTGTGGTTTTGATTTCTAATTGATATTATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACTCCTTGGACTTATTGTGGTTTTGATTTCTAATTGATATTATCA  300

seq1  TTGTGCAGTCACAGAATTTTTAATGTTGACACACCTTTCAAGACCTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCAGTCACAGAATTTTTAATGTTGACACACCTTTCAAGACCTCAGT  350

seq1  ATTCAGACATGCAACCTCACAGTCATGACCCAAAGCTTTAGAAGTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGACATGCAACCTCACAGTCATGACCCAAAGCTTTAGAAGTTAAAT  400

seq1  TTTCAATAAAAAACTGATTTAGGATATCTATTTCTATAACATTGATCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAAAAAACTGATTTAGGATATCTATTTCTATAACATTGATCTTT  450

seq1  GACAAGGGAGCTAAAACCATCCAATGGAAAAAAAACCAGTATTTTCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGGAGCTAAAACCATCCAATGGAAAAAAAACCAGTATTTTCAACA  500

seq1  AATGGTGCTGGCATAACTGGCAGTTATCATATAGAAGAATGCGAATTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGCTGGCATAACTGGCAGTTATCATATAGAAGAATGCGAATTGAT  550

seq1  CCATTCCTATCTCATTGTACTAAGGTCAAATCTAAGTGGATTAAGTAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTATCTCATTGTACTAAGGTCAAATCTAAGTGGATTAAGTAACT  600

seq1  CCACATAAAACCAGAGACAATGAAACTTATAGAGGAGAAAGTGGGGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAAAACCAGAGACAATGAAACTTATAGAGGAGAAAGTGGGGAAAA  650

seq1  GCCTCGAGATATGGGCACAAAGGGAAAAATTCCTGATTAGAACAGCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGAGATATGGGCACAAAGGGAAAAATTCCTGATTAGAACAGCAATG  700

seq1  GCTTGTGCTGTATGATTGAGAATCGACAAATGGGACCTCATAAAATAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGCTGTATGATTGAGAATCGACAAATGGGACCTCATAAAATAGGC  750

seq1  TTCTGTAAGGCAAAAGACACTGTCAATAACGCAAAAAGGCCACCAACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGGCAAAAGACACTGTCAATAACGCAAAAAGGCCACCAACAGA  800

seq1  TTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCA  850

seq1  ATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAAATAACCCCAT  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATATATAAAGAACTCAAGAAAGTGGACTCCAGAAAATCAAATAACCCCAT  900

seq1  TAAAAAGTGGGGC-TCAGAGCTAAACAAAGATTTCTCAC  938
      ||||||||||||| |||||||||||||||||||||||||
seq2  TAAAAAGTGGGGCTTCAGAGCTAAACAAAGATTTCTCAC  939

seq1: chr7_84413860_84415007
seq2: B6Ng01-145F01.g_66_1208 (reverse)

seq1  TGTGGCCCAAT-GCCATGA-TCAAAATACATTTATTTGATATTGGT--AG  46
      |||| |||||| |||||||  ||||||||||||| |||| ||||||  ||
seq2  TGTGCCCCAATGGCCATGACACAAAATACATTTA-TTGA-ATTGGTGAAG  48

seq1  ATGGAATAGAATCTATGATGATTGGATTTTGGACATTTATAACTATACAC  96
      |||| ||||||||   ||||| |||| ||||||||||| |||||||||||
seq2  ATGG-ATAGAATCATAGATGA-TGGA-TTTGGACATTT-TAACTATACAC  94

seq1  TGTAGGTGAATCAAGTAGTTGAATAAA-TGTCTGTGATGAGACCCTGTTG  145
       ||| ||| |||||||||||||||||| | |||||||||||| |||||||
seq2  -GTAAGTG-ATCAAGTAGTTGAATAAATTTTCTGTGATGAGA-CCTGTTG  141

seq1  CTTTGGTAAGTGTGTTATTATAACACTGATACATTTGCTTTATTATCTAT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTAAGTGTGTTATTATAACACTGATACATTTGCTTTATTATCTAT  191

seq1  GTTGTATGTGTTATATAATAACATCAGCCATATACTAGGTATTGTTATTG  245
      | ||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  G-TGTATGTGTTATATAATAACATCAGGCATATACTAGGTATTGTTATTG  240

seq1  CTTTAC-AAAAACTATTTTGGGATTTAACATGTCCCCTACATTAAACATT  294
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAAAAAACTATTTTGGGATTTAACATGTCCCCTACATTAAACATT  290

seq1  TAAAAATAGAGATATCCATCACTTGGATAATTTTGGAAAAAATACTGACA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGAGATATCCATCACTTGGATAATTTTGGAAAAAATACTGACA  340

seq1  TGAACATACAACTTAGATAATGCTATCTTTGGTAAAACATAGAAAGAATT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATACAACTTAGATAATGCTATCTTTGGTAAAACATAGAAAGAATT  390

seq1  TGATGACCTTTCAAATGCATGTTTATTAAAGTTTTGAGTTACTGTAAATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGACCTTTCAAATGCATGTTTATTAAAGTTTTGAGTTACTGTAAATG  440

seq1  TGGTTGTTAGTCTTTATCACTCCCGGTATCCTTTTGGATGTTTAAAATTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTTAGTCTTTATCACTCCCGGTATCCTTTTGGATGTTTAAAATTT  490

seq1  GCCAAAATGTAAAAGATGCAAAGGTTAAAAATAGAAAAAAAAAAAACAAA  544
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCCAAAATGTAAAAGATGCAAAGGTTAAAAATAG-AAAAAAAAAAACAAA  539

seq1  AACAAAAAAACAAAAACCGATGCATGGGGGCTAAGAACACCAGAGCCATC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAACAAAAACCGATGCATGGGGGCTAAGAACACCAGAGCCATC  589

seq1  AGCAACTTTCTGCTGTGAAATGGATAAATTGTAGTTCATAGAACTTTAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTTTCTGCTGTGAAATGGATAAATTGTAGTTCATAGAACTTTAAG  639

seq1  GTGTTGGGTCTTGTGTCGATTCCCCAAGATTTCATATAGAGGCACCTGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGGGTCTTGTGTCGATTCCCCAAGATTTCATATAGAGGCACCTGAA  689

seq1  AAACTGGAACAGTCATCAGCCCCCATCTATCTCAGTCCCAAATTGATTCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAACAGTCATCAGCCCCCATCTATCTCAGTCCCAAATTGATTCT  739

seq1  TTACTACTGTCTTAGTTATTTTTCTTGTTGATTCGAGGGAAAATTAATGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACTGTCTTAGTTATTTTTCTTGTTGATTCGAGGGAAAATTAATGA  789

seq1  CAGAGTAACTTGAGGAAAGAGATATTTAAAAAGTAATCCTGTAATAATCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTAACTTGAGGAAAGAGATATTTAAAAAGTAATCCTGTAATAATCT  839

seq1  CAGAGTGTGTTCCATCATGCCTGGGAAAATACTGTATCAGTTCCCAGGTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGTGTTCCATCATGCCTGGGAAAATACTGTATCAGTTCCCAGGTA  889

seq1  ACAGCAGTAAAAAATGTGTGCCTATCACTGTTCCTGTGTGTCCACCCAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTAAAAAATGTGTGCCTATCACTGTTCCTGTGTGTCCACCCAAG  939

seq1  AAAGACAGAGTAACTGAAATGAGACATGGGTAGAACCTTCAAGATCTCAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGAGTAACTGAAATGAGACATGGGTAGAACCTTCAAGATCTCAT  989

seq1  CCCAGTGACTTCTGCCATCAAATGTTTTTGCAACCTTACAAAACAGTGCC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGACTTCTGCCATCAAATGTTTTTGCAACCTTACAAAACAGTGCC  1039

seq1  CTTACTTGGAGCTGTATTCACATGCTTTGAGTCTGTGGAGGGCATTTCAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTGGAGCTGTATTCACATGCTTTGAGTCTGTGGAGGGCATTTCAG  1089

seq1  GCTAAAAACACTCTATCTGCACATCTGACTACAAATAATAACCTAAATGA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAAACACTCTATCTGCACATCTGACTACAAATAATAACCTAAATGA  1139

seq1  ATTC  1148
      ||||
seq2  ATTC  1143