BAC Information

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BAC

Clone NameB6Ng01-145L05
Chromosome7 (Build37)
Map Location 95,104,208 - 95,105,344
singlet/doubletsinglet
Overlap geneGrm5
Upstream geneEG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145L05.bB6Ng01-145L05.g
ACCDH943034DH943035
length1,1231,150
definitionDH943034|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L05, 5' end.DH943035|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccattttttaatggagttatttgatt
ttctgaagtccaccttcttgagtcctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcagtttca
tgaggtcccatttgtcaattctggatcttacagcacaagccattgctgtt
ctattcagaaatttttcccttgtgcccatttcttcaaggcttttccccac
tttcttctctataagtttcagtgtcactggttttatgtggagttccttga
tccaattagatttgaccttagtacaaggagataatggtattgggttttat
aagcagttttacagcagtaatctggtgaccatcctaataaaactgtgaag
tatttctgaaaaaaaagaagaaaattaaagctagcacaaattatttattt
atacttttacagcttttgagaatttttcaagatgttcatcaaaagtcctt
ggattattttcatttcctaaatgtaaatgaatagcttttatacaattgca
gaacaatatttactcattatttaaaagaaatacctgctaaatttaagctt
tgaagcttgtgcctgatgcatagttgattttaaactagtacttattaatt
aaataggttaatttcaaattttgagagattatcaatttttatggataact
aatcatttttttttgattgagaagattcccattactacagtatttgacct
gagagagtcattaaacctcactcacttactcacttactcattccaaagtt
accaacacaaccaaaaactaatctttgaaagacatttttacgtgacatgt
aatttttttctttatatacatatctgaatcatatatttgtaatcattaat
ttgttactattagctcaatttcaatgattttcatcttataagcattgagg
tataaatattaaaaaaatcctctaagtctgcgaggtagaaagagaaaaac
tgcatttatgaatgatgtcttagtttatagtgtgtttgttatagttttaa
gtaataaatatgcattatagact
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccctaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaacg
gagtactactcagctattaaaaagaatgaatttacgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatacccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatctaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctagcaaaca
cagaagtggatgctcacagtcagctaatgatggatcatagggctcccaat
ggagagctagagaaagtagccaagagctaaagggatcttcaccctatagt
gaacaacatatgactacagtaccgagctctgactctagctgcaattatat
caaagatgctagtcgcatcacttgaagaaggtcaatgacccaaaccttgt
gcccagtagggtaaccaggcaaatggattgtgggcaagggatgggtctta

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95104208_95105344
seq2: B6Ng01-145L05.b_43_1165

seq1  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGAGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGAGTTATTTGATT  50

seq1  TTCTGAAGTCCACCTTCTTGAGTCCTTTATATATATTGGATATTAGTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTCCACCTTCTTGAGTCCTTTATATATATTGGATATTAGTCCC  100

seq1  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT  150

seq1  TTTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTTATTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAGTTTCA  200

seq1  TGAGGTCCCATTTGTCAATTCTGGATCTTACAGCACAAGCCATTGCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCCCATTTGTCAATTCTGGATCTTACAGCACAAGCCATTGCTGTT  250

seq1  CTATTCAGAAATTTTTCCCTTGTGCCCATTTCTTCAAGGCTTTTCCCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCAGAAATTTTTCCCTTGTGCCCATTTCTTCAAGGCTTTTCCCCAC  300

seq1  TTTCTTCTCTATAAGTTTCAGTGTCACTGGTTTTATGTGGAGTTCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTCTATAAGTTTCAGTGTCACTGGTTTTATGTGGAGTTCCTTGA  350

seq1  TCCAATTAGATTTGACCTTAGTACAAGGAGATAATGGTATTGGGTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTAGATTTGACCTTAGTACAAGGAGATAATGGTATTGGGTTTTAT  400

seq1  AAGCAGTTTTACAGCAGTAATCTGGTGACCATCCTAATAAAACTGTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTTTACAGCAGTAATCTGGTGACCATCCTAATAAAACTGTGAAG  450

seq1  TATTTCTGAAAAAAAAGAAGAAAATTAAAGCTAGCACAAATTATTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGAAAAAAAAGAAGAAAATTAAAGCTAGCACAAATTATTTATTT  500

seq1  ATACTTTTACAGCTTTTGAGAATTTTTCAAGATGTTCATCAAAAGTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTACAGCTTTTGAGAATTTTTCAAGATGTTCATCAAAAGTCCTT  550

seq1  GGATTATTTTCATTTCCTAAATGTAAATGAATAGCTTTTATACAATTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTTTCATTTCCTAAATGTAAATGAATAGCTTTTATACAATTGCA  600

seq1  GAACAATATTTACTCATTATTTAAAAGAAATACCTGCTAAATTTAAGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATATTTACTCATTATTTAAAAGAAATACCTGCTAAATTTAAGCTT  650

seq1  TGAAGCTTGTGCCTGATGCATAGTTGATTTTAAACTAGTACTTATTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTGTGCCTGATGCATAGTTGATTTTAAACTAGTACTTATTAATT  700

seq1  AAATAGGTTAATTTCAAATTTTGAGAGATTATCAATTTTTATGGATAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGTTAATTTCAAATTTTGAGAGATTATCAATTTTTATGGATAACT  750

seq1  AATCA-TTTTTTTTGATTGAGAAGATTCCCATTACTACAGTATTTGACCT  799
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTTTTTTTGATTGAGAAGATTCCCATTACTACAGTATTTGACCT  800

seq1  GAGAGAGTCATTAAACCTCACTCACTTACTCACTTACTCATTCCAAAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTCATTAAACCTCACTCACTTACTCACTTACTCATTCCAAAGTT  850

seq1  ACCAACACAACCAAAAACTAATCTTTGAAAGACATTTTTACGTGACATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACACAACCAAAAACTAATCTTTGAAAGACATTTTTACGTGACATGT  900

seq1  AATTTTTTTCTTTATATACATATCTGAATCATAATATTTGTAATCATTAA  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATTTTTTTCTTTATATACATATCTGAATCAT-ATATTTGTAATCATTAA  949

seq1  TTTGTTACTATTAGCTCAATTTTCAATGATTTTCATCTTATAAGCATTGA  999
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTGTTACTATTAGCTCAA-TTTCAATGATTTTCATCTTATAAGCATTGA  998

seq1  GGTATAAATATTAAAAAAAATCCTCCTAAGTCTGCGAGGTTAGACAGAGA  1049
      |||||||||||| ||||||||||| |||||||||||||| |||| |||| 
seq2  GGTATAAATATT-AAAAAAATCCT-CTAAGTCTGCGAGG-TAGAAAGAG-  1044

seq1  AAAAACTGCATTTTATGAAATGATGTCATAAGTATATAGTGTGTTTGTCT  1099
      |||||||||| |||||| ||||||||| | ||| ||||||||||||||  
seq2  AAAAACTGCA-TTTATG-AATGATGTC-TTAGTTTATAGTGTGTTTGT--  1089

seq1  AATAAATATTTAAGTTAATAAATAATGCATTATAGACT  1137
        || |  |||||| |||||||| ||||||||||||||
seq2  --TATAGTTTTAAG-TAATAAAT-ATGCATTATAGACT  1123