BAC Information

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BAC

Clone NameB6Ng01-145P05
Chromosome7 (Build37)
Map Location 112,039,871 - 112,040,954
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665
Downstream geneOlfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145P05.bB6Ng01-145P05.g
ACCDH943220DH943221
length1,1801,078
definitionDH943220|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P05, 5' end.DH943221|Mus musculus domesticus DNA, BAC clone: B6Ng01-145P05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctaaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacactagtcagaatggctaagttcaaaaattcaggtgaaagc
agatgctggcaaggatgtggggaaataggaacactcctccactgttggtg
ggattgcaagcttgtacaatcactctggaaatcagtctggcggttcctca
caaaagtggacatagtactactggaatatcctgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaggacacatgctccactat
gtttttagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggacacacaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaagaatgaattcataaaattcctaggcaa
atggatggacctggatggcatcatcctgagtgaggtaatccaatcacaaa
ggaactcatacaatatgtactcagtgataaatggatattagcccagaaat
ttagaatacccatgatataagatacaatttgctaaacacatgaaactgaa
gaagaacgaagaccaaagtgtggacacgttcccccttcttagagttggga
acaaaactcccatggaaggagttacagagacacagtttggagctgagacg
aaaggatggaccacctagagactgccatatccggggatccatcccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaa
aaggaccctgatatagctgtctctttgtgagactagcccggggcctagca
aagacagaagttggaatgctcaccagtcagcttatttgatggatcacagg
gcccccattgcaggagcttagagaagttaccaggagctaaaggatctgca
actctataagttgaacaatatgacttacccagtacttctcagagcctcgt
gttcttgctgcatatggtatcagaagatgccttattggccattatgaaag
agagcctattggtcgtgcactttatctgcctcgtcacagggaatacaggg
ccagaaagtggagtggttgtttgcgagata
gaattctgtatgagtagaaaagtaaagaaatgatgtatggagactaaatc
ttgttagtgtttagaagacaaacttgcagtaatttgagacaacctgtctt
ctctgttaaagataaactcttacatcaaatatgttgctgatgtagggaaa
aaggaggtttagtgcttcaatgtgtatgtatgtatgcatatgtatgtaag
gcattttttatattttatggaatatctcaattatagtgatttgtttgcct
tataagtacactctatttttaaatgtctgttcttcctcaaatgttcagtt
tttaagtaccattaaaactggttttatgaaatgcaattgttttgttggtt
aagaaggttatatcatcagattcctatggtatttgatattatttcactca
ttcttgatttactaaatacaattgactaatactattagctttatactggg
tttaatttgagggacacagagtagaatttccaaaaatgtgtcaaagggca
atgagaatagacacactggtgaaggaaacatgaaaagaaatgtgtatgaa
aaacaagaggatatgattaaaaatagatgctgtctgtaagacggacatct
tagtagacaattaatggaatgctttattggtcttggattgagtttgtctg
aagattaatatgcttaatttctaaggattaaacattgttgtgttaatgaa
tttctgtatttctataaatttaaattttttatacttttttttcaaataca
acaatggcttacgaacaatatatacaaatattccagtttttaagaaatgg
cataacatggtttctagtatattataatcatttaataaattatgttattt
ttttatgagctgtcagtttcaactcagattaattctgaacatcactcctc
agcagagggtgggagttcatggctgtgcttccactggcttctcccagcat
gctagtacaggccatatagttttatttttatttaaatatttttcagacaa
tatattttgatcatatcctctcttcttctgcctctccagatcattcatct
cccttatccactaatctcatttcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112039871_112040954
seq2: B6Ng01-145P05.g_70_1147 (reverse)

seq1  AAAAAGAACATGAGATTAAGTGGAT-AGGGAGATGGAAATGATCTGGGAG  49
      |||||||| |||||||| ||||||| |||||||||  |||||||| ||||
seq2  AAAAAGAA-ATGAGATT-AGTGGATAAGGGAGATG--AATGATCT-GGAG  45

seq1  GAGCAGGAAGAAGAAGAGGATATGATCAAAATATATTGTCTGAAAAATAT  99
        ||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGCA-GAAGAAG-AGAGGATATGATCAAAATATATTGTCTGAAAAATAT  93

seq1  TTAAATAAAAATAAAACTATATGGCCTGTACTAGCATGCTTGTGAGAAGC  149
      ||||||||||||||||||||||||||||||||||||||| || |||||||
seq2  TTAAATAAAAATAAAACTATATGGCCTGTACTAGCATGC-TGGGAGAAGC  142

seq1  CAGTGGAAGCACAGCCATGGAACTCCAACCCTCTGCTGAGGAGTGATGTT  199
      |||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  CAGTGGAAGCACAGCCAT-GAACTCCCACCCTCTGCTGAGGAGTGATGTT  191

seq1  CAGAATTAATCTGAGTTGAAACTGACAGCTCAT-AAAAAATAACATAATT  248
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CAGAATTAATCTGAGTTGAAACTGACAGCTCATAAAAAAATAACATAATT  241

seq1  TATTAAATGATTATAATATACTAGAAACCATGTTATGCCATTTCTTAAAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATGATTATAATATACTAGAAACCATGTTATGCCATTTCTTAAAA  291

seq1  ACTGGAATATTTGTATATATTGTTCGTAAGCCATTGTTGTATTTGAAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATATTTGTATATATTGTTCGTAAGCCATTGTTGTATTTGAAAAA  341

seq1  AAAGTAT-AAAAATTTAAATTTATAGAAATACAGAAATTCATTAACACAA  397
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATAAAAAATTTAAATTTATAGAAATACAGAAATTCATTAACACAA  391

seq1  CAATGTTTAATCCTTAGAAATTAAGCATATTAATCTTCAGACAAACTCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTAATCCTTAGAAATTAAGCATATTAATCTTCAGACAAACTCAA  441

seq1  TCCAAGACCAATAAAGCATTCCATTAATTGTCTACTAAGATGTCCGTCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGACCAATAAAGCATTCCATTAATTGTCTACTAAGATGTCCGTCTT  491

seq1  ACAGACAGCATCTATTTTTAATCATATCCTCTTGTTTTTCATACACATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGCATCTATTTTTAATCATATCCTCTTGTTTTTCATACACATTT  541

seq1  CTTTTCATGTTTCCTTCACCAGTGTGTCTATTCTCATTGCCCTTTGACAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATGTTTCCTTCACCAGTGTGTCTATTCTCATTGCCCTTTGACAC  591

seq1  ATTTTTGGAAATTCTACTCTGTGTCCCTCAAATTAAACCCAGTATAAAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGAAATTCTACTCTGTGTCCCTCAAATTAAACCCAGTATAAAGC  641

seq1  TAATAGTATTAGTCAATTGTATTTAGTAAATCAAGAATGAGTGAAATAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTATTAGTCAATTGTATTTAGTAAATCAAGAATGAGTGAAATAAT  691

seq1  ATCAAATACCATAGGAATCTGATGATATAACCTTCTTAACCAACAAAACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATACCATAGGAATCTGATGATATAACCTTCTTAACCAACAAAACA  741

seq1  ATTGCATTTCATAAAACCAGTTTTAATGGTACTTAAAAACTGAACATTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATTTCATAAAACCAGTTTTAATGGTACTTAAAAACTGAACATTTG  791

seq1  AGGAAGAACAGACATTTAAAAATAGAGTGTACTTATAAGGCAAACAAATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAACAGACATTTAAAAATAGAGTGTACTTATAAGGCAAACAAATC  841

seq1  ACTATAATTGAGATATTCCATAAAATATAAAAAATGCCTTACATACATAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAATTGAGATATTCCATAAAATATAAAAAATGCCTTACATACATAT  891

seq1  GCATACATACATACACATTGAAGCACTAAACCTCCTTTTTCCCTACATCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACATACATACACATTGAAGCACTAAACCTCCTTTTTCCCTACATCA  941

seq1  GCAACATATTTGATGTAAGAGTTTATCTTTAACAGAGAAGACAGGTTGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATATTTGATGTAAGAGTTTATCTTTAACAGAGAAGACAGGTTGTC  991

seq1  TCAAATTACTGCAAGTTTGTCTTCTAAACACTAACAAGATTTAGTCTCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTACTGCAAGTTTGTCTTCTAAACACTAACAAGATTTAGTCTCCA  1041

seq1  TACATCATTTCTTTACTTTTCTACTCATACAGAATTC  1084
      |||||||||||||||||||||||||||||||||||||
seq2  TACATCATTTCTTTACTTTTCTACTCATACAGAATTC  1078