BAC Information

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BAC

Clone NameB6Ng01-146A24
Chromosome7 (Build37)
Map Location 67,557,166 - 67,658,524
singlet/doubletdoublet
Overlap genenone
Upstream geneUbe3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
Downstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146A24.bB6Ng01-146A24.g
ACCDH943302DH943303
length1,099968
definitionDH943302|Mus musculus domesticus DNA, BAC clone: B6Ng01-146A24, 5' end.DH943303|Mus musculus domesticus DNA, BAC clone: B6Ng01-146A24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,557,166 - 67,558,273)(67,657,562 - 67,658,524)
sequence
gaattcttaatgctcatgagaataggccaggataaagaaaaatagaacag
aatattacaataaaaaacaaatcatgagttttgcgaattacatttcttca
gaagacagaactgtagaatatgttttcatgctcgtcataggtgtagtgca
gagtagtgtatttactgagatttctctttttttttccttgctgtcagtat
ttaattaaacgtttaaactacccacatgcctttttaaaacatgtttttgc
cacatgtagcttatccttgtgttgtatacagcttgaattcatgagcactt
actcctgtaacacttgttaaccctcagagtataaactgctgcagtctgga
acattcacatgcctagtttattagttctatatcctaggttccacccactg
tatatttgtgtccataatcaaatgtatacatgttttatgtgtgttcacat
gtaacaataatttttaaagaggagttaatgacttttaaagaggagtgcag
aatatacagaattgaagtatagaaattaggtaaatttagtattattgtag
aataatttttaaaaaattgtcaaaaattcattcaaaaagaaaataaagta
gtaagaggatttagaatatatggtttaagtagaaaaaagagtagtaatga
tgtagaatgtggtgaaagttactttacagatacctatataattatatgaa
actatcatttttattaaaaacatgcagccatgggggaaacacacagcaaa
ttatgttatgtacgtaagagggatttcattaatatctatggaagaaaata
cctgacattcttggtactttttttaaggttagaatttaaagggacacaag
ctgatttcagatctttgaacacttactagatattgtcctcaggacaatac
attaggaaaatgaaatatatagttttcctctgtggcaagaaagattaata
catctagtttagaaaatattgcatttcttctgaaagaaaagatattcaca
aatatctagatttaaaatattagccatgaatatgcatgattgaaacatta
aatggtgctataacaaaatctagaaattaatagatgctgaaagttagca
gaattctggtcaaaggccacgagaagattaagacaatgtgtccaggatca
taggaagcatcttattcactgacacattctacatagataccttgcaacca
cattagctgggataggttacatcaaattccagccactccagagatttctg
gttttgtaggaaggtctagggtggatgtagtatagaccattttagagcag
ttttagtccatagctgatttctccatggtgcctgacagtcaagcagaaat
cttttgggacaaatataaactaggacataaggcaaagatgcagtacttag
tggaaaatctgtaacttctgggtatatttgaaattttcactgcttgttct
tagtatttcagaaagtagaagtagtactgagactagtagaagatgatgtg
cactgccacacacacacacacacacacacagagagagagagagagagaga
gagagagagacagagagagagacagagagagagagacagagagagagata
cagagatacagagatacagagagacagagagacagagaggcagatagaca
gagagagacccttaggaataggcagtaattgtataagcttagacttatta
tgattgacagtagtacttatctgcagtctacttccttatgacctgtaaca
ggtcaaacaaactcacaattcacggaagtttttccttatgtttttatatt
tattacacaacatttacagtaatgcattctattaattaattatatagcat
aatcaccattcacctcctggtctgctctccaccccctccccatcatcctt
ttcctcccctgtcacaaataggatgtcaccatcccctcaccccactccat
ccaaccaaacctcagcataaaaattattttttataattttatcattacta
aaattcataacatgtacttaaattctcattgtaaaagtcttagtttgggt
gggggaaagggagttgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67557166_67558273
seq2: B6Ng01-146A24.b_41_1139

seq1  GAATTCTTAATGCTCATGAGAATAGGCCAGGATAAAGAAAAATAGAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGCTCATGAGAATAGGCCAGGATAAAGAAAAATAGAACAG  50

seq1  AATATTACAATAAAAAACAAATCATGAGTTTTGCGAATTACATTTCTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTACAATAAAAAACAAATCATGAGTTTTGCGAATTACATTTCTTCA  100

seq1  GAAGACAGAACTGTAGAATATGTTTTCATGCTCGTCATAGGTGTAGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGAACTGTAGAATATGTTTTCATGCTCGTCATAGGTGTAGTGCA  150

seq1  GAGTAGTGTATTTACTGAGATTTCTCTTTTTTTTTCCTTGCTGTCAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGTATTTACTGAGATTTCTCTTTTTTTTTCCTTGCTGTCAGTAT  200

seq1  TTAATTAAACGTTTAAACTACCCACATGCCTTTTTAAAACATGTTTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAACGTTTAAACTACCCACATGCCTTTTTAAAACATGTTTTTGC  250

seq1  CACATGTAGCTTATCCTTGTGTTGTATACAGCTTGAATTCATGAGCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTAGCTTATCCTTGTGTTGTATACAGCTTGAATTCATGAGCACTT  300

seq1  ACTCCTGTAACACTTGTTAACCCTCAGAGTATAAACTGCTGCAGTCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGTAACACTTGTTAACCCTCAGAGTATAAACTGCTGCAGTCTGGA  350

seq1  ACATTCACATGCCTAGTTTATTAGTTCTATATCCTAGGTTCCACCCACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCACATGCCTAGTTTATTAGTTCTATATCCTAGGTTCCACCCACTG  400

seq1  TATATTTGTGTCCATAATCAAATGTATACATGTTTTATGTGTGTTCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGTGTCCATAATCAAATGTATACATGTTTTATGTGTGTTCACAT  450

seq1  GTAACAATAATTTTTAAAGAGGAGTTAATGACTTTTAAAGAGGAGTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAATAATTTTTAAAGAGGAGTTAATGACTTTTAAAGAGGAGTGCAG  500

seq1  AATATACAGAATTGAAGTATAGAAATTAGGTAAATTTAGTATTATTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAGAATTGAAGTATAGAAATTAGGTAAATTTAGTATTATTGTAG  550

seq1  AATAATTTTTAAAAAATTGTCAAAAATTCATTCAAAAAGAAAATAAAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTTTAAAAAATTGTCAAAAATTCATTCAAAAAGAAAATAAAGTA  600

seq1  GTAAGAGGATTTAGAATATATGGTTTAAGTAGAAAAAAGAGTAGTAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGATTTAGAATATATGGTTTAAGTAGAAAAAAGAGTAGTAATGA  650

seq1  TGTAGAATGTGGTGAAAGTTACTTTACAGATACCTATATAATTATATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATGTGGTGAAAGTTACTTTACAGATACCTATATAATTATATGAA  700

seq1  ACTATCATTTTTATTAAAAACATGCAGCCATGGGGGAAACACACAGCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATTTTTATTAAAAACATGCAGCCATGGGGGAAACACACAGCAAA  750

seq1  TTATGTTATGTACGTAAGAGGGATTTCATTAATATCTATGGAAGAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTATGTACGTAAGAGGGATTTCATTAATATCTATGGAAGAAAATA  800

seq1  CCTGACATTCTTGGTAC-TTTTTTAAGGTTAGAA-TTAAAGGGACACAAG  848
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  CCTGACATTCTTGGTACTTTTTTTAAGGTTAGAATTTAAAGGGACACAAG  850

seq1  CTGATTTCAGATCTTTGAACACTTACTAGATATTGTCCTCAGGACAATAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCAGATCTTTGAACACTTACTAGATATTGTCCTCAGGACAATAC  900

seq1  ATTAGGAAAATGAAATATATAGTTTTCCTCTGTGGCAAGAAAGATTAATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTAGGAAAATGAAATATATAGTTTTCCTCTGTGGCAAGAAAGATTAAT-  949

seq1  ACATCTAGTTTAAGAAATATTGCATTTCTCCTGAAAGAAAAGATATTCAC  998
      ||||||||||||  ||||||||||||||| ||||||||||||||||||||
seq2  ACATCTAGTTTAGAAAATATTGCATTTCTTCTGAAAGAAAAGATATTCAC  999

seq1  AAAATATCTAGATTTAAAAATATAGCCAATGAATATGCAATGAAATGAAA  1048
       ||||||||||||||||||   ||||| |||||||||| ||| | |||||
seq2  -AAATATCTAGATTTAAAATATTAGCC-ATGAATATGC-ATG-ATTGAAA  1045

seq1  CAATAAAAAGTGAATATAACAAACACAAAAGAAATTAATAAGGAAAGCTG  1098
      || ||||  |||  |||||||||  |   |||||||||||    | ||||
seq2  CATTAAATGGTG-CTATAACAAAATC--TAGAAATTAATA---GATGCTG  1089

seq1  AAAGTAAGCA  1108
      ||||| ||||
seq2  AAAGTTAGCA  1099

seq1: chr7_67657562_67658524
seq2: B6Ng01-146A24.g_66_1033 (reverse)

seq1  TCCAACTCCCTTTCCCCCACCC-AACT-AGACTTTTACAATGAGAATTTA  48
      |||||||||||||||||||||| |||| ||||||||||||||||||||||
seq2  TCCAACTCCCTTTCCCCCACCCAAACTAAGACTTTTACAATGAGAATTTA  50

seq1  AGTACATGTTATGAATTTTAGTAATGAT-AAATTATAAAAAATAA-TTTT  96
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  AGTACATGTTATGAATTTTAGTAATGATAAAATTATAAAAAATAATTTTT  100

seq1  ATGCTGAGGTTTGGTTGGATGGAGTGGGGTGAGGGGATGGTGACATCCTA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGGTTTGGTTGGATGGAGTGGGGTGAGGGGATGGTGACATCCTA  150

seq1  TTTGTGACAGGGGAGG-AAAGGATGATGGGGAGGGGGTGGAGAGCAGACC  195
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTGTGACAGGGGAGGAAAAGGATGATGGGGAGGGGGTGGAGAGCAGACC  200

seq1  AGGAGGTGAATGGTGATTATGCTATATAATTAATTAATAGAATGCATTAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGAATGGTGATTATGCTATATAATTAATTAATAGAATGCATTAC  250

seq1  TGTAAATGTTGTGTAATAAATATAAAAACATAAGGAAAAACTTCCGTGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGTTGTGTAATAAATATAAAAACATAAGGAAAAACTTCCGTGAA  300

seq1  TTGTGAGTTTGTTTGACCTGTTACAGGTCATAAGGAAGTAGACTGCAGAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGTTTGTTTGACCTGTTACAGGTCATAAGGAAGTAGACTGCAGAT  350

seq1  AAGTACTACTGTCAATCATAATAAGTCTAAGCTTATACAATTACTGCCTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTACTGTCAATCATAATAAGTCTAAGCTTATACAATTACTGCCTA  400

seq1  TTCCTAAGGGTCTCTCTCTGTCTATCTGCCTCTCTGTCTCTCTGTCTCTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAGGGTCTCTCTCTGTCTATCTGCCTCTCTGTCTCTCTGTCTCTC  450

seq1  TGTATCTCTGTATCTCTGTATCTCTCTCTCTGTCTCTCTCTCTCTGTCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTCTGTATCTCTGTATCTCTCTCTCTGTCTCTCTCTCTCTGTCTC  500

seq1  TCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTG  550

seq1  TGTGTGTGTGTGGCAGTGCACATCATCTTCTACTAGTCTCAGTACTACTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGGCAGTGCACATCATCTTCTACTAGTCTCAGTACTACTT  600

seq1  CTACTTTCTGAAATACTAAGAACAAGCAGTGAAAATTTCAAATATACCCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCTGAAATACTAAGAACAAGCAGTGAAAATTTCAAATATACCCA  650

seq1  GAAGTTACAGATTTTCCACTAAGTACTGCATCTTTGCCTTATGTCCTAGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTACAGATTTTCCACTAAGTACTGCATCTTTGCCTTATGTCCTAGT  700

seq1  TTATATTTGTCCCAAAAGATTTCTGCTTGACTGTCAGGCACCATGGAGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTGTCCCAAAAGATTTCTGCTTGACTGTCAGGCACCATGGAGAA  750

seq1  ATCAGCTATGGACTAAAACTGCTCTAAAATGGTCTATACTACATCCACCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTATGGACTAAAACTGCTCTAAAATGGTCTATACTACATCCACCC  800

seq1  TAGACCTTCCTACAAAACCAGAAATCTCTGGAGTGGCTGGAATTTGATGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTTCCTACAAAACCAGAAATCTCTGGAGTGGCTGGAATTTGATGT  850

seq1  AACCTATCCCAGCTAATGTGGTTGCAAGGTATCTATGTAGAATGTGTCAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATCCCAGCTAATGTGGTTGCAAGGTATCTATGTAGAATGTGTCAG  900

seq1  TGAATAAGATGCTTCCTATGATCCTGGACACATTGTCTTAATCTTCTCGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAGATGCTTCCTATGATCCTGGACACATTGTCTTAATCTTCTCGT  950

seq1  GGCCTTTGACCAGAATTC  963
      ||||||||||||||||||
seq2  GGCCTTTGACCAGAATTC  968