BAC Information

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BAC

Clone NameB6Ng01-146B10
Chromosome7 (Build37)2 (Build37)
Map Location 14,385,036 - 14,386,18683,165,811 - 83,165,948
singlet/doubletsingletsinglet
Overlap geneSult2a1
Upstream geneZfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194
Downstream geneEG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146B10.bB6Ng01-146B10.g
ACCDH943322DH943323
length1,137360
definitionDH943322|Mus musculus domesticus DNA, BAC clone: B6Ng01-146B10, 5' end.DH943323|Mus musculus domesticus DNA, BAC clone: B6Ng01-146B10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,385,036 - 14,386,186)(83,165,811 - 83,165,948)
sequence
gaattcctcctggctcaggcaagtctaacacttaatacagctttttaatg
ctctatgatttagggaattaggttatctaatggtaaataatggaatgtgt
attagcattatcttagatttgcacatattttgatgattcaaaaatggcac
caatctgatagaggaattgagaagacaaatattatctttatatattttac
tttcaaagttatttccagacatatccatttcatcattctctataatgaat
tagtgaagcaagtgggtaatgtatttcgtgtcccccatcagtgacctggt
ttccagaattacctggcttaaaggatataacatagtaaaagaaaaataat
cctcccaaataaaagttgtcttcaaatgaaaaaaaaaaaaaaaacaacaa
taacaacaaaaatatatgctacatataatcactaggataattaaatttcc
aaagattaacgaagtcttatcaagtattttggtagaactatattataatt
aatgtatgtatgtatgtattcctgctatcatctgtgctgcatgacaaaga
gtatttgtatttggaagagattaaaactaagtggggtctcatcctaaaat
tatcttcctggcaaagcagaaacaacagttgtctttatggaatttggtct
taaattctattccatctgctctgatttgtctctgctaatgcttttgcttg
tcactttccttatccctttgctattaacagagctacttcattcctttagg
tatgtaataacagacttattttcttacaatgttttaacaatgccaaattc
tcattcattatagaaaatccagaaacagagcactttgcttaggtgagacc
ttgtttctagtgcagagaaaatatgtctcctcagagtctggagtgcagta
gtctgagggcagctggcaagaacagtctatctgatgactgacaccttctt
tctctactctaagtccatctcatctatcatatctataagtctgggtgagg
cacagtctgattcattctgtctaagtactccatatctgtacagctatgaa
ccacacacaacaacaatctgcttccatcataagagaggagttgcaaaaaa
tagaagagcataaatccttcgaaaagaattattccaa
ccgatctttccaagaattttatcattaagcagtgttggactttatcgaat
gctttctcagcatccaatgagatgatcatgtggtttttttgtgtgtttga
gtttgtctatatagtggattatgttgatggatttctgtatattgaaccat
ccttacatccttgggatgaagcctacttgatcatgctggatatacatttt
gatgtgttattggatttggtttgcaagaattttattgatttttacatgga
tattcataagggaaattggtctgcagttctctttctttgttggatctttg
tgtggtttaggtatcagagtaattgtggcctcatataatgaattgggtag
agtaccttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14385036_14386186
seq2: B6Ng01-146B10.b_49_1185

seq1  GAATTCCTCCTGGCTCAGGCAAGTCTAACACTTAATACAGCTTTTTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTGGCTCAGGCAAGTCTAACACTTAATACAGCTTTTTAATG  50

seq1  CTCTATGATTTAGGGAATTAGGTTATCTAATGGTAAATAATGGAATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGATTTAGGGAATTAGGTTATCTAATGGTAAATAATGGAATGTGT  100

seq1  ATTAGCATTATCTTAGATTTGCACATATTTTGATGATTCAAAAATGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATTATCTTAGATTTGCACATATTTTGATGATTCAAAAATGGCAC  150

seq1  CAATCTGATAGAGGAATTGAGAAGACAAATATTATCTTTATATATTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGATAGAGGAATTGAGAAGACAAATATTATCTTTATATATTTTAC  200

seq1  TTTCAAAGTTATTTCCAGACATATCCATTTCATCATTCTCTATAATGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTTATTTCCAGACATATCCATTTCATCATTCTCTATAATGAAT  250

seq1  TAGTGAAGCAAGTGGGTAATGTATTTCGTGTCCCCCATCAGTGACCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGCAAGTGGGTAATGTATTTCGTGTCCCCCATCAGTGACCTGGT  300

seq1  TTCCAGAATTACCTGGCTTAAAGGATATAACATAGTAAAAGAAAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAATTACCTGGCTTAAAGGATATAACATAGTAAAAGAAAAATAAT  350

seq1  CCTCCCAAATAAAAGTTGTCTTCAAATG-AAAAAAAAAAAAAAACAACAA  399
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTCCCAAATAAAAGTTGTCTTCAAATGAAAAAAAAAAAAAAAACAACAA  400

seq1  TAACAACAAAAATATATGCTACATATAATCACTAGGATAATTAAATTTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAACAAAAATATATGCTACATATAATCACTAGGATAATTAAATTTCC  450

seq1  AAAGATTAACGAAGTCTTATCAAGTATTTTGGTAGAACTATATTATAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAACGAAGTCTTATCAAGTATTTTGGTAGAACTATATTATAATT  500

seq1  AATGTATGTATGTATGTATTCCTGCTATCATCTGTGCTGCATGACAAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGTATGTATGTATTCCTGCTATCATCTGTGCTGCATGACAAAGA  550

seq1  GTATTTGTATTTGGAAGAGATTAAAACTAAGTGGGGTCTCATCCTAAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGTATTTGGAAGAGATTAAAACTAAGTGGGGTCTCATCCTAAAAT  600

seq1  TATCTTCCTGGCAAAGCAGAAACAACAGTTGTCTTTATGGAATTTGGTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCTGGCAAAGCAGAAACAACAGTTGTCTTTATGGAATTTGGTCT  650

seq1  TAAATTCTATTCCATCTGCTCTGATTTGTCTCTGCTAATGCTTTTGCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTATTCCATCTGCTCTGATTTGTCTCTGCTAATGCTTTTGCTTG  700

seq1  TCACTTTCCTTATCCCTTTGCTATTAACAGAGCTACTTCATTCCTTTAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTCCTTATCCCTTTGCTATTAACAGAGCTACTTCATTCCTTTAGG  750

seq1  TATGTAATAACAGACTTATTTTCTTACAATGTTTTAACAATGCCAAATTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAATAACAGACTTATTTTCTTACAATGTTTTAACAATGCCAAATTC  800

seq1  TCATTCATTATAGAAAATCCAGAAACAGAGCACTTTGCTTAGGTGAGACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTATAGAAAATCCAGAAACAGAGCACTTTGCTTAGGTGAGACC  850

seq1  TTGTTTCTAGTGCAGAG-AAATATGTCTCCTCAGAGTCTGGAGTGCAGTA  898
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGTTTCTAGTGCAGAGAAAATATGTCTCCTCAGAGTCTGGAGTGCAGTA  900

seq1  GTCTGAGGGCAGCTGGCAAGAACAGTTCTATCTGATGACTGACACCTTCT  948
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTCTGAGGGCAGCTGGCAAGAACAG-TCTATCTGATGACTGACACCTTCT  949

seq1  TTCTTCTACTCTAAGTTCCATCTCATCTATCATTATCTAATTAAGTCTGG  998
      ||| ||||||||||| |||||||||||||||| ||||||  |||||||||
seq2  TTC-TCTACTCTAAG-TCCATCTCATCTATCA-TATCTA--TAAGTCTGG  994

seq1  GTGAGGCACAAGGTCTGATTCATTCTGTCAAAGTAACTCCATATCTGTAC  1048
      ||||||||||  ||||||||||||||||| |||| |||||||||||||||
seq2  GTGAGGCACA--GTCTGATTCATTCTGTCTAAGT-ACTCCATATCTGTAC  1041

seq1  AGCTATGAAACCACACACACAAACAATCTGCTCCCATCAT-AGAGAGGAG  1097
      ||||||| |||||||||||  ||||||||||| ||||||| |||||||||
seq2  AGCTATG-AACCACACACAACAACAATCTGCTTCCATCATAAGAGAGGAG  1090

seq1  TTGGCAAATAAATAG-AGAGCATTAAAATCCCCTTTTCAGAAAAG-ATAA  1145
      || ||||| |||||| |||||||  ||||||    ||| |||||| || |
seq2  TT-GCAAA-AAATAGAAGAGCAT--AAATCC----TTC-GAAAAGAATTA  1131

seq1  TTCCAA  1151
      ||||||
seq2  TTCCAA  1137

seq1: chr2_83165811_83165948
seq2: B6Ng01-146B10.g_300_434 (reverse)

seq1  AGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATAC  50
      |||||||||||||||||| ||||| ||||| ||||| |||||||||||||
seq2  AGAAGGTACTCTACCCAATTCATTATATGAGGCCACAATTACTCTGATAC  50

seq1  CTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACTTATTTCT  100
      |||||||||| |||||||||||||||| |||||||| |||||  ||||| 
seq2  CTAAACCACACAAAGATCCAACAAAGAAAGAGAACTGCAGACCAATTTCC  100

seq1  CTTATGAATATCGATGCAAAAATCCTCAAGAAAATTCT  138
      |||||||||||| ||| |||||   |||| ||||||||
seq2  CTTATGAATATCCATGTAAAAA---TCAATAAAATTCT  135