BAC Information

Click to search

BAC

Clone NameB6Ng01-146C11
Chromosome7 (Build37)
Map Location 85,041,178 - 85,042,219
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11, Det1, Isg20l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146C11.bB6Ng01-146C11.g
ACCDH943372DH943373
length1,0391,166
definitionDH943372|Mus musculus domesticus DNA, BAC clone: B6Ng01-146C11, 5' end.DH943373|Mus musculus domesticus DNA, BAC clone: B6Ng01-146C11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgtacagagaaacctaagtcaggggtgggcaggtaaggtac
agagcaagtctgcatcactcatacccaatgcctctccatctggcttgagc
cagagatgcaaaatccaaagtgataaggttgcatgaagtcactatatcag
ttctgcatccatgagcctcccatgaggcgtggtggtgttaatggctgatg
ttaacaggttaggaatatactgctgttaacatgttcttttccccccatag
gattgcgggaggttgcttctccaccctctatacaacatctggtttttctt
cccactttagcctggtgactgatgataggttgccttgcctcacttgctgg
tgagctcaacacgaagccctcttacagtattccctaaaggaagtcaaatc
tgccctttagtaggtcttgtgttcctgtgatcattcctccctcccctctc
acaatgactccaacttccacctgcatttcccaagtgtgcatgctgtaaaa
gtaccacttcaacaccctgttcctaagagctcttctgaaatgtactttcc
gccctcccacctgcagaagcccagaaatactaaattctttgcttgggaac
tctcagcagactcatgaatatcacaaagatgtatccttgcatctttctac
tccagcccccaacaacttgatactcagcacacgttcacaagggaaaggcc
agtaattggttttgctgggagaacaacctcagagataaatgttctgtgta
cagccatttaccttccttgggtgtgtgtgtgtgtttctgtctctggtgcc
aagccctctcattgctcactccctgcacccagagtgccgtcgtggtgatg
gaggggctgtcagaattgtcaccgaacagcttttgggaaaggtgtgtatc
atttggagatgaggcttgctatcctggctctggcagtcaggcacgttgct
cccaaatcaatttgctccccttcacacaagccactttctgttttcatgcc
agaaaacagcttttaaaagaagggtatttggccatatta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccccgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
tgattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcctcatttataatagccagaagctggaaagaaccaagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagccccaaacc
taggattcccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
aacatccaaacgctgacaccattgcataccctagcaagatttttattgaa
aggacccagatgtagctatctcttgtgagactatgctggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagaacccaaggagctaaagggatctgcaccct
ataggtggaacaacattatgaactacagtaccctggagctctgacctcta
gctgcaatatgtaacaaagatggctaatcggccatccttgaagagaggcc
ctttgtactgtactttgtatgccatacaggtacgcatgtcaaagggggat
gtgtgtggttagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_85041178_85042219
seq2: B6Ng01-146C11.b_48_1086

seq1  GAATTCTCTTGTACAGAGAAACCTAAGTCAGGGGTGGGCAGGTAAGGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGTACAGAGAAACCTAAGTCAGGGGTGGGCAGGTAAGGTAC  50

seq1  AGAGCAAGTCTGCATCACTCATACCCAATGCCTCTCCATCTGGCTTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGTCTGCATCACTCATACCCAATGCCTCTCCATCTGGCTTGAGC  100

seq1  CAGAGATGCAAAATCCAAAGTGATAAGGTTGCATGAAGTCACTATATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGCAAAATCCAAAGTGATAAGGTTGCATGAAGTCACTATATCAG  150

seq1  TTCTGCATCCATGAGCCTCCCATGAGGCGTGGTGGTGTTAATGGCTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATCCATGAGCCTCCCATGAGGCGTGGTGGTGTTAATGGCTGATG  200

seq1  TTAACAGGTTAGGAATATACTGCTGTTAACATGTTCTTTTCCCCCCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGGTTAGGAATATACTGCTGTTAACATGTTCTTTTCCCCCCATAG  250

seq1  GATTGCGGGAGGTTGCTTCTCCACCCTCTATACAACATCTGGTTTTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCGGGAGGTTGCTTCTCCACCCTCTATACAACATCTGGTTTTTCTT  300

seq1  CCCACTTTAGCCTGGTGACTGATGATAGGTTGCCTTGCCTCACTTGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTAGCCTGGTGACTGATGATAGGTTGCCTTGCCTCACTTGCTGG  350

seq1  TGAGCTCAACACGAAGCCCTCTTACAGTATTCCCTAAAGGAAGTCAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCAACACGAAGCCCTCTTACAGTATTCCCTAAAGGAAGTCAAATC  400

seq1  TGCCCTTTAGTAGGTCTTGTGTTCCTGTGATCATTCCTCCCTCCCCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTTAGTAGGTCTTGTGTTCCTGTGATCATTCCTCCCTCCCCTCTC  450

seq1  ACAATGACTCCAACTTCCACCTGCATTTCCCAAGTGTGCATGCTGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGACTCCAACTTCCACCTGCATTTCCCAAGTGTGCATGCTGTAAAA  500

seq1  GTACCACTTCAACACCCTGTTCCTAAGAGCTCTTCTGAAATGTACTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCACTTCAACACCCTGTTCCTAAGAGCTCTTCTGAAATGTACTTTCC  550

seq1  GCCCTCCCACCTGCAGAAGCCCAGAAATACTAAATTCTTTGCTTGGGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCCCACCTGCAGAAGCCCAGAAATACTAAATTCTTTGCTTGGGAAC  600

seq1  TCTCAGCAGACTCATGAATATCACAAAGATGTATCCTTGCATCTTTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCAGACTCATGAATATCACAAAGATGTATCCTTGCATCTTTCTAC  650

seq1  TCCAGCCCCCAACAACTTGATACTCAGCACACGTTCACAAGGGAAAGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCCCAACAACTTGATACTCAGCACACGTTCACAAGGGAAAGGCC  700

seq1  AGTAATTGGTTTTGCTGGGAGAACAACCTCAGAGATAAATGTTCTGTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGGTTTTGCTGGGAGAACAACCTCAGAGATAAATGTTCTGTGTA  750

seq1  CAGCCATTTACCTTCCTTGGGTGTGTGTGTGTGTTTCTGTCTCTGGTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATTTACCTTCCTTGGGTGTGTGTGTGTGTTTCTGTCTCTGGTGCC  800

seq1  AAGCCCTCTCATTGCTCACTCCCTGCACCCAGAGTGCCGTCGTGGTGATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTCTCATTGCTCACTCCCTGCACCCAGAGTGCCGTCGTGGTGATG  850

seq1  GAGGGGCTGTCAGAATTGTCACCGAACAGCTTTTGGGAAAGGTGTGTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGCTGTCAGAATTGTCACCGAACAGCTTTTGGGAAAGGTGTGTATC  900

seq1  ATTTGGAGATGAGGCTTGCTATCCTGGCTCTGGCAGTCAGGCACGTTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGATGAGGCTTGCTATCCTGGCTCTGGCAGTCAGGCACGTTGCT  950

seq1  CCCAAATCAATTTGCTCCTCCTTCACACAAGCCACTTTCTGTTTTCATGC  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCCAAATCAATTTGCTCC-CCTTCACACAAGCCACTTTCTGTTTTCATGC  999

seq1  CAGAAAACAGGCTTTTAAAAGAAGGGATATTTGGCAATATTA  1042
      ||||||||| |||||||||||||||| |||||||| ||||||
seq2  CAGAAAACA-GCTTTTAAAAGAAGGG-TATTTGGCCATATTA  1039