BAC Information

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BAC

Clone NameB6Ng01-146G23
Chromosome7 (Build37)
Map Location 119,416,286 - 119,555,293
singlet/doubletdoublet
Overlap geneMical2, Micalcl
Upstream geneLOC384658, Galntl4, LOC668399, LOC100042678, Usp47, Dkk3
Downstream geneParva, LOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146G23.bB6Ng01-146G23.g
ACCDH943580DH943581
length880763
definitionDH943580|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G23, 5' end.DH943581|Mus musculus domesticus DNA, BAC clone: B6Ng01-146G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,554,416 - 119,555,293)(119,416,286 - 119,417,032)
sequence
gaattccaccaatgtgctagagcatgcatggtccctacccccatgaataa
ataagcaaaaaacgtaattttttttaaaaaaaggaagatatagtctgagc
tgggtatggtggtacacacttattatctcagtacttgggaggctgaggac
agctacagagagagactttgaatgtgagaggggaggtgctttgagttcac
ctcaggctgggggctgtgcaagctaggatgggttcttcattcctatctgt
agcatgacttgctcaattgtgaggtgtgtgtcttcagcaggggccccaaa
tgtaccccatactcaccatccttgagcattttctgtcgtagtttctgctc
cagtctgctctgatgatcttctagttctagttcttgggccctgagtacaa
gaaaatgttccagccattaacaggggactgtgtgaaaacacaaatagagg
cacccatggaccagcagtcttttttttcccattaaaattggcatctttta
atatgtctaatagaaggtattgccactgttgcggccaccagaggtgccca
gaaagatggctgaaatgtgttggatttgagagaggatgagagaaatggag
agtggttgaaggccaccaaactgctctttagggtttgcctctgtggggaa
cagcagagcacagaatggagctgagtccccttggaaggtcagctggggac
ttggcttttgagcctggggatgccccagtcatttcctaccatgtcgatca
ccagatgctggcccatgcattgctggggggatccccaatgctcactctgg
aattcagagaaatgaggatctagacaacgtggtggatgtcaagaggtgat
agtttgaggatggtgatcctcgagactaga
gaattctattctgtgccaatcccaggacaagaggattgaactctccatgg
caatggagcctgttatgtttttgttttggtgatggggagtggctgaggcc
accgtgggatacggctgctttccattgccccggggaagcagctgccaagc
tcctgagcccagtgcaccagtgtgcagaagacagaaagggtcctaactgt
actaaaaccatgtgtacttcagctctgagaagaggtgctgcccccttccc
ctgaccccatgctggttcaataacttgccctgctctagcctcaagcagag
ggtaccagggtagcaaacaaaaggggagaagacagatgccctgggtacca
ctcccaccaatgcctcccttcagagttttaatttcctggttcatggcttc
ctaggagttgagccaagggagcgtcagagttacctttttcagtcattgta
tatgatggctttcttttttaaagggaccctgttgtatggcccctttaccc
ccaagaaaaccataaggagggtaccatagaagttgtgtggtcactgtttt
gacacactctctcccggaggatttttttttagtaaccgttatccccaggc
tgctttgaagttgtggcaatccccttgctttagtggctaggattaccttt
tgtctagcaggactgttttttaggaagtggcactgcctggggtgggctga
tccaaaggtgaggcctgctgaggggagcccgcccaccctgggcatctttt
ttctttggttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119554416_119555293
seq2: B6Ng01-146G23.b_44_923 (reverse)

seq1  TCTAGTCTTGAGGATCACATACCTCAAACTATCACCTCTTGACAT-CACC  49
      |||||||| |||||||||   |||||||||||||||||||||||| ||||
seq2  TCTAGTCTCGAGGATCACCATCCTCAAACTATCACCTCTTGACATCCACC  50

seq1  ACGTTGTCTAGATCCTCATTTCTCTGAACTCCAGAGTG-GCATTGGGGAT  98
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  ACGTTGTCTAGATCCTCATTTCTCTGAATTCCAGAGTGAGCATTGGGGAT  100

seq1  CCCCCCAGCAATGCATGGGCCAGCATCTGGTGATCGACATGGTAGGAAAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAGCAATGCATGGGCCAGCATCTGGTGATCGACATGGTAGGAAAT  150

seq1  GACTGGGGCATCCCCAGGCTCAAAAGCCAAGTCCCCAGCTGACCTTCCAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGGCATCCCCAGGCTCAAAAGCCAAGTCCCCAGCTGACCTTCCAA  200

seq1  GGGGACTCAGCTCCATTCTGTGCTCTGCTGTTCCCCACAGAGGCAAACCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTCAGCTCCATTCTGTGCTCTGCTGTTCCCCACAGAGGCAAACCC  250

seq1  TAAAGAGCAGTTTGGTGGCCTTCAACCACTCTCCATTTCTCTCATCCTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCAGTTTGGTGGCCTTCAACCACTCTCCATTTCTCTCATCCTCT  300

seq1  CTCAAATCCAACACATTTCAGCCATCTTTCTGGGCACCTCTGGTGGCCGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATCCAACACATTTCAGCCATCTTTCTGGGCACCTCTGGTGGCCGC  350

seq1  AACAGTGGCAATACCTTCTATTAGACATATTAAAAGATGCCAATTTTAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGGCAATACCTTCTATTAGACATATTAAAAGATGCCAATTTTAAT  400

seq1  GGGAAAAAAAAGACTGCTGGTCCATGGGTGCCTCTATTTGTGTTTTCACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAAAAGACTGCTGGTCCATGGGTGCCTCTATTTGTGTTTTCACA  450

seq1  CAGTCCCCTGTTAATGGCTGGAACATTTTCTTGTACTCAGGGCCCAAGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCCTGTTAATGGCTGGAACATTTTCTTGTACTCAGGGCCCAAGAA  500

seq1  CTAGAACTAGAAGATCATCAGAGCAGACTGGAGCAGAAACTACGACAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACTAGAAGATCATCAGAGCAGACTGGAGCAGAAACTACGACAGAA  550

seq1  AATGCTCAAGGATGGTGAGTATGGGGTACATTTGGGGCCCCTGCTGAAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCAAGGATGGTGAGTATGGGGTACATTTGGGGCCCCTGCTGAAGA  600

seq1  CACACACCTCACAATTGAGCAAGTCATGCTACAGATAGGAATGAAGAACC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCTCACAATTGAGCAAGTCATGCTACAGATAGGAATGAAGAACC  650

seq1  CATCCTAGCTTGCACAGCCCCCAGCCTGAGGTGAACTCAAAGCACCTCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTAGCTTGCACAGCCCCCAGCCTGAGGTGAACTCAAAGCACCTCCC  700

seq1  CTCTCACATTCAAAGTCTCTCTCTGTAGCTGTCCTCAGCCTCCCAAGTAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACATTCAAAGTCTCTCTCTGTAGCTGTCCTCAGCCTCCCAAGTAC  750

seq1  TGAGATAATAAGTGTGTACCACCATACCCAGCTCAGACTATATCTTCCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAATAAGTGTGTACCACCATACCCAGCTCAGACTATATCTTCCTT  800

seq1  TTTTTAAAAAAAATTACGTTTTTTGCTTATTTATTCATGGGGGTAGGGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAAAAATTACGTTTTTTGCTTATTTATTCATGGGGGTAGGGAC  850

seq1  CATGCATGCTCTAGCACATTGGTGGAATTC  878
      ||||||||||||||||||||||||||||||
seq2  CATGCATGCTCTAGCACATTGGTGGAATTC  880

seq1: chr7_119416286_119417032
seq2: B6Ng01-146G23.g_68_830

seq1  GAATTCTATTCTGTGCCAATCCCAGGACAAGAGGATTGAACTCTCCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTCTGTGCCAATCCCAGGACAAGAGGATTGAACTCTCCATGG  50

seq1  CAATGGAGCCTGTTATGTTTTTGTTTTGGTGATGGGGAGTGGCTGAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGCCTGTTATGTTTTTGTTTTGGTGATGGGGAGTGGCTGAGGCC  100

seq1  ACCGTGGGATACGGCTGCTTTCCATTGCCCCGGGGAAGCAGCTGCCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGGGATACGGCTGCTTTCCATTGCCCCGGGGAAGCAGCTGCCAAGC  150

seq1  TCCTGAGCCCAGTGCACCAGTGTGCAGAAGACAGAAAGGGTCCTAACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGCCCAGTGCACCAGTGTGCAGAAGACAGAAAGGGTCCTAACTGT  200

seq1  ACTAAAACCATGTGTACTTCAGCTCTGAGAAGAGGTGCTGCCCCCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACCATGTGTACTTCAGCTCTGAGAAGAGGTGCTGCCCCCTTCCC  250

seq1  CTGACCCCATGCTGGTTCAATAACTTGCCCTGCTCTAGCCTCAAGCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCCATGCTGGTTCAATAACTTGCCCTGCTCTAGCCTCAAGCAGAG  300

seq1  GGTACCAGGGTAGCAAACAAAAGGGGAGAAGACAGATGCCCTGGGTACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCAGGGTAGCAAACAAAAGGGGAGAAGACAGATGCCCTGGGTACCA  350

seq1  CTCCCACCAATGCCTCCCTTCAGAGTTTTAATTTCCTGGTTCATGGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCAATGCCTCCCTTCAGAGTTTTAATTTCCTGGTTCATGGCTTC  400

seq1  CTAGGAGTTGAGCCAAGGGAGCGTCAGAGTTACCTTTTTCAGTCATTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGTTGAGCCAAGGGAGCGTCAGAGTTACCTTTTTCAGTCATTGTA  450

seq1  TATGATGGCTTTCTTTTTTAAAGGGACCCTG-TGTATGGCCCCTTTACCC  499
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATGATGGCTTTCTTTTTTAAAGGGACCCTGTTGTATGGCCCCTTTACCC  500

seq1  CCAAGAAAACCATAAGGAGGGTACCATAGAAGTTGTGTGGTCACTG-TTT  548
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCAAGAAAACCATAAGGAGGGTACCATAGAAGTTGTGTGGTCACTGTTTT  550

seq1  GACACACTCTCTCCCGGAGGA--TTTTTTTAG-AACCGTTAT-CCCAGGC  594
      |||||||||||||||||||||  ||||||||| ||||||||| |||||||
seq2  GACACACTCTCTCCCGGAGGATTTTTTTTTAGTAACCGTTATCCCCAGGC  600

seq1  TGCTTTGAAGTTGTGGCAATCCCCTTGCTTCAGT-GCTAGGATTACC-TT  642
      |||||||||||||||||||||||||||||| ||| |||||||||||| ||
seq2  TGCTTTGAAGTTGTGGCAATCCCCTTGCTTTAGTGGCTAGGATTACCTTT  650

seq1  TGTCTAGCAGGACTG-TTTTTAGGAAGTGGCACTGCCTGGG--TGGCTGA  689
      ||||||||||||||| |||||||||||||||||||||||||   ||||||
seq2  TGTCTAGCAGGACTGTTTTTTAGGAAGTGGCACTGCCTGGGGTGGGCTGA  700

seq1  TCCAAAGGTGA-GCCTGCTGA-GGGAGCCAG-CCAGCCT-GGCATC-TTT  734
      ||||||||||| ||||||||| ||||||| | ||| ||| |||||| |||
seq2  TCCAAAGGTGAGGCCTGCTGAGGGGAGCCCGCCCACCCTGGGCATCTTTT  750

seq1  TTCTTTTGTTTTG  747
      |||||| ||||||
seq2  TTCTTTGGTTTTG  763