BAC Information

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BAC

Clone NameB6Ng01-146I01
Chromosome7 (Build37)
Map Location 143,789,368 - 143,883,704
singlet/doubletdoublet
Overlap geneLOC546009
Upstream genePtpre, Mki67, LOC668764
Downstream geneEG621677, EG668771, Mgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146I01.bB6Ng01-146I01.g
ACCDH943631DH943632
length1,0841,077
definitionDH943631|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I01, 5' end.DH943632|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,882,613 - 143,883,704)(143,789,368 - 143,790,436)
sequence
gaattccaagtacatatgacaatattttctggtcttatgacccaaattca
agccacattgtctcctagtctatccacctttgtaggttgtaatggtaaga
aactgcttgggtttgatttctgctgagcagtttctgtctttgaatggggc
tggacagctataatgggtaaaactaaagccactgtcttccctctactaag
cggatccaggaggagctgctctgtgcagtcgctggttgtcccaggtcata
acactggtggaggcatcagggacaggtgggacatcttttcgcaggagaca
ggctggtgggtcagatggaagcaacctgtccttgttcacaggttgcttac
cagactcttccagctttgcctgcaacatccgctacacacaaccagagtct
caggtagtgccatatggttttgttcttcttaatgcaacccttcagtaaca
ccacatatttgtttctcagcctcttagacagaggcccatggctgtaaaga
aaatacttccaggcagtctccggagaggagctggtgtgcgaccatttcat
gataaaagggactatgagcatcaaggccccatgcactcacttccctggct
cccgtgcaatcttgtttgatgccatgtttcacattgggaagcagatccct
cctctgcttaaaaatgaggaccaaacacccagcttcttgatcgaaccgat
aaagccagccacaataaaaagaaacaatacatagcattcattatactgct
gagtggggagtttgtttaagacttgggccctaaatggtctttcatcccag
gatgcagggtttgtgatgatgggagagagccagctcgtccgtcccttata
aaatcagtgcaaatacgaacagaataaaaatggttaaaggaatcttgtta
cagattctgtttattccacaaggattggggaccggccgttagtcattagg
caatgacttctatttggggcttgttctggaaagttgcctcttatggagga
aatcaacgttaaagaagtaaacagaattaaaatatagtgagtttatcagg
tttctattggttgactaactgccctctacggaat
gaattcactctgacttctggggcataccatgggaagagtctgggatgcag
ggtcttccccatgcattcagatgccatccatgccaaggcactcctgtgta
ttgcctagtgtcctaactaatcagaacatatgggaatcccttaaatcttc
aatagcctcctagagtaaaacttgcggcatctttggtgtggatgttcaga
aaattcctaagtaaagccagatgttctaatagggttcactgttactgttc
accgtccagggaactgcatgctaaagagaaagaccaggggtagaagtgag
ttcagtcagtttgtttccatcatttcatgtccaactctacctttggcaaa
gcaaacccttgaggccacactacatgcaacttgagcgccttccctttctg
cttaggggactccagggctcgggatgaaggtcctcagagaggatgatgat
ggtgtacacgctagatgacacaggatgactacagtgctcacagcagacaa
ctatgctctcatgggcaatgtctagttcaggtcccagcacacacaaaaca
caaaggctttgatgttttcataaacctattttgcccttgatttttctgac
aattttgtttggtcatgacactacccccatgttaaggtaaaaatactttt
caagatataatagttatagacttggcattgcattgtttctaaatatctac
attaaaaccttaacccttaatatcatgcattcggaacttttagaaggtgg
ctaaggttagagaagtcatgaggttgggcttcttgatagcacacatgtcc
taggtcccttataaatgatatatagggaacaatctccctcccccccatcc
ccttccccctttccatcttccctcccccttctgccataatcatgtcaaga
taacctccagaaggcagccatactcattctctcaaacctgctgttacctt
gcttcttagacactagctttcagacccataaataaataaataaattaaat
aaataaataaattaataaatgcatgccctggtcccagtccagttcttcta
ggttattccaagccacacttgcagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_143882613_143883704
seq2: B6Ng01-146I01.b_47_1130 (reverse)

seq1  ATTCCGTTAGAAGGCAGTTAAGTCAAACAATAGAAAACTGAATAAAACTC  50
      |||||| |||| ||||||| |||||| ||||||||| ||||   ||||||
seq2  ATTCCG-TAGAGGGCAGTT-AGTCAACCAATAGAAACCTGA--TAAACTC  46

seq1  ACTATATTTAAATTCTGTTTACTTCTTTAACCTTTGATTTCCCTCCATAA  100
      ||||||||| |||||||||||||||||||| | ||||||| |||||||||
seq2  ACTATATTTTAATTCTGTTTACTTCTTTAA-CGTTGATTT-CCTCCATAA  94

seq1  GAGGCACCTTTTCCAAGAACAAGCCCCAAATAG-AGTCATTGCCTAATGA  149
      |||||| ||||  | |||||||||||||||||| ||||||||||||||||
seq2  GAGGCAACTTT--CCAGAACAAGCCCCAAATAGAAGTCATTGCCTAATGA  142

seq1  CTAACGGCCGGTCCCCAAATCCTTGTGGAATAAACAGAATCTGTAACAAG  199
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTAACGGCCGGTCCCC-AATCCTTGTGGAATAAACAGAATCTGTAACAAG  191

seq1  ATTCCTTTAACCATTTTTATTCTGTTCGTATTTGCACTGATTTTATAAGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTAACCATTTTTATTCTGTTCGTATTTGCACTGATTTTATAAGG  241

seq1  GACGGACGAGCTGGCTCTCTCCCATCATCACAAACCCTGCATCCTGGGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGACGAGCTGGCTCTCTCCCATCATCACAAACCCTGCATCCTGGGAT  291

seq1  GAAAGACCATTTAGGGCCCAAGTCTTAAACAAACTCCCCACTCAGCAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACCATTTAGGGCCCAAGTCTTAAACAAACTCCCCACTCAGCAGTA  341

seq1  TAATGAATGCTATGTATTGTTTCTTTTTATTGTGGCTGGCTTTATCGGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATGCTATGTATTGTTTCTTTTTATTGTGGCTGGCTTTATCGGTT  391

seq1  CGATCAAGAAGCTGGGTGTTTGGTCCTCATTTTTAAGCAGAGGAGGGATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCAAGAAGCTGGGTGTTTGGTCCTCATTTTTAAGCAGAGGAGGGATC  441

seq1  TGCTTCCCAATGTGAAACATGGCATCAAACAAGATTGCACGGGAGCCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCCAATGTGAAACATGGCATCAAACAAGATTGCACGGGAGCCAGG  491

seq1  GAAGTGAGTGCATGGGGCCTTGATGCTCATAGTCCCTTTTATCATGAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAGTGCATGGGGCCTTGATGCTCATAGTCCCTTTTATCATGAAAT  541

seq1  GGTCGCACACCAGCTCCTCTCCGGAGACTGCCTGGAAGTATTTTCTTTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGCACACCAGCTCCTCTCCGGAGACTGCCTGGAAGTATTTTCTTTAC  591

seq1  AGCCATGGGCCTCTGTCTAAGAGGCTGAGAAACAAATATGTGGTGTTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGGCCTCTGTCTAAGAGGCTGAGAAACAAATATGTGGTGTTACT  641

seq1  GAAGGGTTGCATTAAGAAGAACAAAACCATATGGCACTACCTGAGACTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTTGCATTAAGAAGAACAAAACCATATGGCACTACCTGAGACTCT  691

seq1  GGTTGTGTGTAGCGGATGTTGCAGGCAAAGCTGGAAGAGTCTGGTAAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGTGTAGCGGATGTTGCAGGCAAAGCTGGAAGAGTCTGGTAAGCA  741

seq1  ACCTGTGAACAAGGACAGGTTGCTTCCATCTGACCCACCAGCCTGTCTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAACAAGGACAGGTTGCTTCCATCTGACCCACCAGCCTGTCTCC  791

seq1  TGCGAAAAGATGTCCCACCTGTCCCTGATGCCTCCACCAGTGTTATGACC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAAAAGATGTCCCACCTGTCCCTGATGCCTCCACCAGTGTTATGACC  841

seq1  TGGGACAACCAGCGACTGCACAGAGCAGCTCCTCCTGGATCCGCTTAGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAACCAGCGACTGCACAGAGCAGCTCCTCCTGGATCCGCTTAGTA  891

seq1  GAGGGAAGACAGTGGCTTTAGTTTTACCCATTATAGCTGTCCAGCCCCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAGACAGTGGCTTTAGTTTTACCCATTATAGCTGTCCAGCCCCAT  941

seq1  TCAAAGACAGAAACTGCTCAGCAGAAATCAAACCCAAGCAGTTTCTTACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACAGAAACTGCTCAGCAGAAATCAAACCCAAGCAGTTTCTTACC  991

seq1  ATTACAACCTACAAAGGTGGATAGACTAGGAGACAATGTGGCTTGAATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAACCTACAAAGGTGGATAGACTAGGAGACAATGTGGCTTGAATTT  1041

seq1  GGGTCATAAGACCAGAAAATATTGTCATATGTACTTGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATAAGACCAGAAAATATTGTCATATGTACTTGGAATTC  1084

seq1: chr7_143789368_143790436
seq2: B6Ng01-146I01.g_65_1141

seq1  GAATTCACTCTGACTTCTGGGGCATACCATGGGAAGAGTCTGGGATGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGACTTCTGGGGCATACCATGGGAAGAGTCTGGGATGCAG  50

seq1  GGTCTTCCCCATGCATTCAGATGCCATCCATGCCAAGGCACTCCTGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCCCCATGCATTCAGATGCCATCCATGCCAAGGCACTCCTGTGTA  100

seq1  TTGCCTAGTGTCCTAACTAATCAGAACATATGGGAATCCCTTAAATCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTAGTGTCCTAACTAATCAGAACATATGGGAATCCCTTAAATCTTC  150

seq1  AATAGCCTCCTAGAGTAAAACTTGCGGCATCTTTGGTGTGGATGTTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCTCCTAGAGTAAAACTTGCGGCATCTTTGGTGTGGATGTTCAGA  200

seq1  AAATTCCTAAGTAAAGCCAGATGTTCTAATAGGGTTCACTGTTACTGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTAAGTAAAGCCAGATGTTCTAATAGGGTTCACTGTTACTGTTC  250

seq1  ACCGTCCAGGGAACTGCATGCTAAAGAGAAAGACCAGGGGTAGAAGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCCAGGGAACTGCATGCTAAAGAGAAAGACCAGGGGTAGAAGTGAG  300

seq1  TTCAGTCAGTTTGTTTCCATCATTTCATGTCCAACTCTACCTTTGGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCAGTTTGTTTCCATCATTTCATGTCCAACTCTACCTTTGGCAAA  350

seq1  GCAAACCCTTGAGGCCACACTACATGCAACTTGAGCGCCTTCCCTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCCTTGAGGCCACACTACATGCAACTTGAGCGCCTTCCCTTTCTG  400

seq1  CTTAGGGGACTCCAGGGCTCGGGATGAAGGTCCTCAGAGAGGATGATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGGGACTCCAGGGCTCGGGATGAAGGTCCTCAGAGAGGATGATGAT  450

seq1  GGTGTACACGCTAGATGACACAGGATGACTACAGTGCTCACAGCAGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACACGCTAGATGACACAGGATGACTACAGTGCTCACAGCAGACAA  500

seq1  CTATGCTCTCATGGGCAATGTCTAGTTCAGGTCCCAGCACACACAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTCTCATGGGCAATGTCTAGTTCAGGTCCCAGCACACACAAAACA  550

seq1  CAAAGGCTTTGATGTTTTCATAAACCTATTTTGCCCTTGATTTTTCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCTTTGATGTTTTCATAAACCTATTTTGCCCTTGATTTTTCTGAC  600

seq1  AATTTTGTTTGGTCATGACACTACCCCCATGTTAAGGTAAAAATACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTTTGGTCATGACACTACCCCCATGTTAAGGTAAAAATACTTTT  650

seq1  CAAGATATAATAGTTATAGACTTGGCATTGCATTGTTTCTAAATATCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATATAATAGTTATAGACTTGGCATTGCATTGTTTCTAAATATCTAC  700

seq1  ATTAAAACCTTAACCCTTAATATCATGCATTCGGAACTTTTAGAAGGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACCTTAACCCTTAATATCATGCATTCGGAACTTTTAGAAGGTGG  750

seq1  CTAAGGTTAGAGAAGTCATGAGGTTGGGCTTCTTGATAGCACACATGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTTAGAGAAGTCATGAGGTTGGGCTTCTTGATAGCACACATGTCC  800

seq1  TAGGT-CCTTATAAATGATATATA-GGAACAATCTCCCTCCCCCCCATCC  848
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  TAGGTCCCTTATAAATGATATATAGGGAACAATCTCCCTCCCCCCCATCC  850

seq1  CC-TCCCCCTTTCCATCTT-CCTCCCCC-TCTGCCAT-ATCATGTCAAGA  894
      || |||||||||||||||| |||||||| |||||||| ||||||||||||
seq2  CCTTCCCCCTTTCCATCTTCCCTCCCCCTTCTGCCATAATCATGTCAAGA  900

seq1  TAACCTCCAGAAGGCAGCCATACTCATTCTCTCAAACCTGCTGTTACCTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCCAGAAGGCAGCCATACTCATTCTCTCAAACCTGCTGTTACCTT  950

seq1  GC-TCTTAGACACTAGCTTTCAGAACCAATAAATAAATAAATAAA-TAAA  992
      || |||||||||||||||||||| ||| ||||||||||||||||| ||||
seq2  GCTTCTTAGACACTAGCTTTCAG-ACCCATAAATAAATAAATAAATTAAA  999

seq1  TAAATAAATAAATAAATAAATGCATGCCCTGGTCCCAGTCCAG-TCTTCT  1041
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  TAAATAAATAAATTAATAAATGCATGCCCTGGTCCCAGTCCAGTTCTTCT  1049

seq1  A-GTTATCCATAGCCCACACTAGCAGATA  1069
      | ||||| |  || ||||||| |||||||
seq2  AGGTTATTCCAAG-CCACACTTGCAGATA  1077