BAC Information

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BAC

Clone NameB6Ng01-146J21
Chromosome7 (Build37)18 (Build37)
Map Location 8,853,326 - 8,854,40918,109,316 - 18,109,846
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneVmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009
Downstream geneLOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146J21.bB6Ng01-146J21.g
ACCDH943710DH943711
length1,082965
definitionDH943710|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J21, 5' end.DH943711|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(8,853,326 - 8,854,409)(18,109,316 - 18,109,846)
sequence
gaattctacgcaaatttattctttttattttttttaattagatattttct
ttatttgcatttcaaattctatcccaaaagtcccctctaccctccccctg
ccctgctccccaacccacccactcctgcttcctgaccctggcattcccct
ctactagggaatataatcttcataagaacaagagcctctcctcccaatga
tggtcgagtaggccatcttctgctaaatatgcagctaaaaacatgagctc
tgcgggaactggttagttcatattgttgttactcctaaacggttgcagac
accattagttccttgggtacattctctagctcctccattggaggctctat
gttccgtccagtagatgacagtgaacatccacttccggattagccacgca
ctgtcagagcctcacaagagacaggtatatcagggtcctgtcagaaactg
ttgctagcataggcgatagtgtcttataaaaatttataaaaacttactgt
cttatatgatatataaatatctaatatagaaattatataaatatatactt
ctctaattatataattataacatatgatatagaaaattataagatacaaa
taatataaatgtataatataaaatatatataaatataaagacttaagaca
atatacatacaatatatatactaaagtcttatgtacaatatatacacatt
taatataaaaataatatgaatatataaatatataactataatatataaca
tatatcctaagtataatacaaaataatataaatatatattgatatataat
gtaaaatatataaatatatgtttatatatataataaatagtgtcttttaa
aaatgtaaaaaacactaaaacttgtagtggagaatgtggggaaaacctcg
aaaatatttttccaggggaaaaattcctgacagaacagcagtggcttgta
ctgtaagatcaagaattgacaaatgagacctaataaattgggatcaggtg
atagaagatgctggcgaggatgttgtaaaagaaggaacatttcttcattt
gtgatgggattgcgagctggtacaccacctgg
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
aggtagcgagattttattgagtatttttgcattgatatttataagggaaa
ctagtctgaaattctctatctttgttgggtatttctgtggttgaggtatc
agagtaattgtggcttcatagaatgagttgggtagagtaccttctatttc
tattttgtggaatagtttgtgtagaactggaattagatctcctttcaagg
tctggtagaactctgcactaacccatctggtcctggactttttttggctt
ttttgtaaatgactgcttctatttctttaggggatatgggactgtttaga
tcgttaatttaatcctgatttaacttttggtacctggtatctgtctagaa
atttgtccatttcgtccaggttttccagttttgttgagtatagccttttg
tagaaggatctgatggtgttttgggttttttcaggatctgttgttatgtc
tttccttttcattctgattttgttaattaggatgctatccctgtgccctc
agtgagtctggctagggttattctatctgttattttttctcaatgaagta
tttctggtttggttgatcttgattaattctcctgtttccacttggccgat
tccgcccctgagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8853326_8854409
seq2: B6Ng01-146J21.b_47_1128

seq1  GAATTCTACGCAAATTTATTCTTTTTATTTTTTTTAATTAGATATTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACGCAAATTTATTCTTTTTATTTTTTTTAATTAGATATTTTCT  50

seq1  TTATTTGCATTTCAAATTCTATCCCAAAAGTCCCCTCTACCCTCCCCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCATTTCAAATTCTATCCCAAAAGTCCCCTCTACCCTCCCCCTG  100

seq1  CCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGACCCTGGCATTCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTCCCCAACCCACCCACTCCTGCTTCCTGACCCTGGCATTCCCCT  150

seq1  CTACTAGGGAATATAATCTTCATAAGAACAAGAGCCTCTCCTCCCAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGGGAATATAATCTTCATAAGAACAAGAGCCTCTCCTCCCAATGA  200

seq1  TGGTCGAGTAGGCCATCTTCTGCTAAATATGCAGCTAAAAACATGAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGAGTAGGCCATCTTCTGCTAAATATGCAGCTAAAAACATGAGCTC  250

seq1  TGCGGGAACTGGTTAGTTCATATTGTTGTTACTCCTAAACGGTTGCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGGAACTGGTTAGTTCATATTGTTGTTACTCCTAAACGGTTGCAGAC  300

seq1  ACCATTAGTTCCTTGGGTACATTCTCTAGCTCCTCCATTGGAGGCTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAGTTCCTTGGGTACATTCTCTAGCTCCTCCATTGGAGGCTCTAT  350

seq1  GTTCCGTCCAGTAGATGACAGTGAACATCCACTTCCGGATTAGCCACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGTCCAGTAGATGACAGTGAACATCCACTTCCGGATTAGCCACGCA  400

seq1  CTGTCAGAGCCTCACAAGAGACAGGTATATCAGGGTCCTGTCAGAAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGAGCCTCACAAGAGACAGGTATATCAGGGTCCTGTCAGAAACTG  450

seq1  TTGCTAGCATAGGCGATAGTGTCTTATAAAAATTTATAAAAACTTACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGCATAGGCGATAGTGTCTTATAAAAATTTATAAAAACTTACTGT  500

seq1  CTTATATGATATATAAATATCTAATATAGAAATTATATAAATATATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGATATATAAATATCTAATATAGAAATTATATAAATATATACTT  550

seq1  CTCTAATTATATAATTATAACATATGATATAGAAAATTATAAGATACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTATATAATTATAACATATGATATAGAAAATTATAAGATACAAA  600

seq1  TAATATAAATGTATAATATAAAATATATATAAATATAAAGACTTAAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAATGTATAATATAAAATATATATAAATATAAAGACTTAAGACA  650

seq1  ATATACATACAATATATATACTAAAGTCTTATGTACAATATATACACATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATACAATATATATACTAAAGTCTTATGTACAATATATACACATT  700

seq1  TAATATAAAAATAATATGAATATATAAATATATAACTATAATATATAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAAAATAATATGAATATATAAATATATAACTATAATATATAACA  750

seq1  TATATCCTAAGTATAATACAAAATAATATAAATATATATTGATATATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCTAAGTATAATACAAAATAATATAAATATATATTGATATATAAT  800

seq1  GTAAAATATATAAATATATGTTTATATATATAATAAATAGTGTCTTTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATATATAAATATATGTTTATATATATAATAAATAGTGTCTTTTAA  850

seq1  AAATGTAAAAAACACTAAAACTTGTAGTGGAGAATGTGGGGAAAAACCTC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATGTAAAAAACACTAAAACTTGTAGTGGAGAATGTGGGG-AAAACCTC  899

seq1  GAAAATA-TTTTCCAGGGGAAAAATTCCTGAACAGAACAGCAGTGGCTTG  949
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  GAAAATATTTTTCCAGGGGAAAAATTCCTG-ACAGAACAGCAGTGGCTTG  948

seq1  TACTGTAAGATCAAGAATTGACAAATGAGACCTAATAAAATTGGATCAGG  999
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  TACTGTAAGATCAAGAATTGACAAATGAGACCTAATAAATTGGGATCAGG  998

seq1  TGATAGAAGATGCTGGCGAGGATGTTGTAAAAG-AGGAACATTCCTCCAT  1048
      ||||||||||||||||||||||||||||||||| ||||||||| || |||
seq2  TGATAGAAGATGCTGGCGAGGATGTTGTAAAAGAAGGAACATTTCTTCAT  1048

seq1  TGTTGATGGGATTGCGAGCTGGTACAACCACTCTGG  1084
      |  |||||||||||||||||||||| ||||| ||||
seq2  TTGTGATGGGATTGCGAGCTGGTAC-ACCAC-CTGG  1082

seq1: chr18_18109316_18109846
seq2: B6Ng01-146J21.g_508_1032 (reverse)

seq1  AACTCAGGGGCGAAATCAACCAAGTGGAAACA--AGAACTATTCAGAGAA  48
      |||||||||||| ||||  |||||||||||||  |||| || ||| || |
seq2  AACTCAGGGGCGGAATCGGCCAAGTGGAAACAGGAGAATTAATCA-AG-A  48

seq1  TCAACCAATCGAGGAGCTGGTTCTTTGAGAAAATCAACAAGGTAGACAAA  98
      |||||||| | | ||  |  ||| |||||||||   |  || ||||  ||
seq2  TCAACCAAACCA-GAAATACTTCATTGAGAAAAAATAACAGATAGAATAA  97

seq1  CCCTTAGCCAGACTCACTAGAGGGCACAGGGAAAGCATTCTAATTAACAA  148
      ||| |||||||||||||| ||||||||||||| ||||| |||||||||||
seq2  CCC-TAGCCAGACTCACT-GAGGGCACAGGGATAGCATCCTAATTAACAA  145

seq1  AATCAGAAATGAAAAGG-GAGACATAACAACAGATCCTGAAGAAATCCAA  197
      |||||| ||||||||||  |||||||||||||||||||||| ||| ||||
seq2  AATCAG-AATGAAAAGGAAAGACATAACAACAGATCCTGAAAAAACCCAA  194

seq1  AACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAA  244

seq1  CCTGGATGAAATGGAGAAGTTTCTAGACAGATACCAGGTACC-AAAGTTG  296
      |||||| |||||||| || ||||||||||||||||||||||| |||||| 
seq2  CCTGGACGAAATGGACAAATTTCTAGACAGATACCAGGTACCAAAAGTTA  294

seq1  AATCAAGATCAGGTTAATGATCTAAACAGCCCGATATCCCCCAAAGAAAT  346
      ||||| ||| |  |||| ||||||||||| || |||||||| ||||||||
seq2  AATCAGGATTAAATTAACGATCTAAACAGTCCCATATCCCCTAAAGAAAT  344

seq1  AGAAGCAGTCATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATG  396
      ||||||||||||| | |       | |||||||||| |||||||||||||
seq2  AGAAGCAGTCATTTACA---AAAAAGCCAAAAAAAGTCCAGGACCAGATG  391

seq1  GGTTTAGTGCAGAGTTCTATCAGACCTCCAAAGAAGATCTAATCCCAGTT  446
      || |||||||||||||||| |||||||  |||| ||||||||| ||||||
seq2  GG-TTAGTGCAGAGTTCTACCAGACCTTGAAAGGAGATCTAATTCCAGTT  440

seq1  CTTCACAAACTATTCCACAAAATAGAAACAGAAGGTACTCTACCCAACTC  496
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTACACAAACTATTCCACAAAATAGAAATAGAAGGTACTCTACCCAACTC  490

seq1  ATTCTATGAAGCCACAATTACTCTGATACCTAAAC  531
      ||||||||||||||||||||||||||||||| |||
seq2  ATTCTATGAAGCCACAATTACTCTGATACCTCAAC  525