BAC Information

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BAC

Clone NameB6Ng01-146P16
Chromosome7 (Build37)
Map Location 62,455,994 - 62,603,674
singlet/doubletdoublet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146P16.bB6Ng01-146P16.g
ACCDH943983DH943984
length1,1401,048
definitionDH943983|Mus musculus domesticus DNA, BAC clone: B6Ng01-146P16, 5' end.DH943984|Mus musculus domesticus DNA, BAC clone: B6Ng01-146P16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,455,994 - 62,457,154)(62,602,630 - 62,603,674)
sequence
gaattcaattccaatcatcccatcacggatgatgccctcttctcacatgt
aggtgtacctgtagatagagcactcataaataaaataaataaatcattgg
cagggagagagacagagagagagagacacacacacacagaaagagagaga
gacagagacagagagagagacacagagagagagacagagagagagagaga
cagagagaaagacacagagagagagagacagagagagagacctgatgatc
acatttagtactgacaataaaatgtacttctgttagactaggttggaata
gcagatggcattttcgatgtgtctgctgtataactgtgggcaaatgtgag
ttagagttgaagatgatgaagtgatgcagtaaggtgtgctgtgtgtccct
agaatggtaagcaaatgttagtttaaggctaatgagtaaagagcatacca
ttatatgctaatagataaagttgatttgtataaaacacatcagtgtctct
tcattaagctatccaattcctatttggcagttaagagcatctcttgtggc
tagaacaatggttcagcaaccagaaacacttattgttcttccagaagaca
caggcttcaaaactgcctacagcttcagatccaggatatctgataccctt
tcctggcttctttgaacatctgccttactcatggcaaacaagaactcaag
ctagcacacacacatacacacagacaacccccaaatacaatattttatga
aatcttaaaaaccatcatctctttcacaggctcattattatccccctgat
aaaatacaaatgttaatcacacaacgttccctaaattgcctgttttcttg
aaacactgtaaattataaagcatatcagtaaattttgagtatgtgccatt
gaatatgcacataatttagttataaattctatacatgaacttctttagtg
atacaaatacagctatagatccaggatgcaccaattcaattctaaatctg
cttgtattaaaatcctatactgggtgtgattttagcagattattcataat
ctctctcatttctcatttaaagcagactaacatcatagtctcatgggtaa
cttggttctttgtcagttatatgtgataccaccactatga
gaattcttccttttaaaattaattttaaaaagaattcttcccatttctag
gaagtctttcattcattgctgaaggtccgttgaattttataaattcattt
caatgattacttctctaatattttctggacacaaaatgagaaaattgaaa
catagtattaaaataaatgtatcattatgtgtgtttgttgtgtatttgag
aaagaagtagaagacataaaaaagacaaactaatgcaactaagttaaatt
tcacataccttattttaaaaactaaacatagaataaaaatggaaatgtaa
caatgatgacacataatatttatctccaattatatgaagaatatatgaat
attaaaaagataaaataactaattgaatactaggggaacagaacttagga
agaaaatttaagaagagattattaatgtttttattttttatacatttact
tatttagttgattaaaattttattttgcaatttagatgtgtataacttgc
atattcattgttctcacttcccgcttcccttctactcttatctatactct
tcacacattctctcatgcttacgtctatttggtttgtgattcacctagat
taaaaagggttgtctttgtgaccatgggtatggacctatttgtttgagtc
tgatgatctaagcagatggcccacaactaatgatagtgactcctcttctc
acaaaaatctattgatagctaaaatttcagagtaaaggaaagggtcttgc
gagccatttcacccatccttgatggaatttatttatagggctggtcctat
attgatccactgcaggcatctgaggttgatgtgagttaatggttataata
accaatctagggactgtttgtcttgctacctttaaccctatcttctggtt
cttttgcatttcctagctctttttttttttttttttgtattgttccctca
gtctatgggggttgaatttaagttacttgttctgggcttaatttctgcat
atgggacagtgatgaggctagcattcctccataattcattgtaatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62455994_62457154
seq2: B6Ng01-146P16.b_52_1191

seq1  GAATTCAATTCCAATCATCCCATCACGGATGATGCCCTCTTCTCACATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCAATCATCCCATCACGGATGATGCCCTCTTCTCACATGT  50

seq1  AGGTGTACCTGTAGATAGAGCACTCATAAATAAAATAAATAAATCATTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACCTGTAGATAGAGCACTCATAAATAAAATAAATAAATCATTGG  100

seq1  CAGGGAGAGAGACAGAGAGAGAGAGACACACACACACAGAAAGAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGAGAGACAGAGAGAGAGAGACACACACACACAGAAAGAGAGAGA  150

seq1  GACAGAGACAGAGAGAGAGACACAGAGAGAGAGACAGAGAGAGAGAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAGAGAGAGAGACACAGAGAGAGAGACAGAGAGAGAGAGAGA  200

seq1  CAGAGAGAAAGACACAGAGAGAGAGAGACAGAGAGAGAGACCTGATGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAAAGACACAGAGAGAGAGAGACAGAGAGAGAGACCTGATGATC  250

seq1  ACATTTAGTACTGACAATAAAATGTACTTCTGTTAGACTAGGTTGGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGTACTGACAATAAAATGTACTTCTGTTAGACTAGGTTGGAATA  300

seq1  GCAGATGGCATTTTCGATGTGTCTGCTGTATAACTGTGGGCAAATGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGCATTTTCGATGTGTCTGCTGTATAACTGTGGGCAAATGTGAG  350

seq1  TTAGAGTTGAAGATGATGAAGTGATGCAGTAAGGTGTGCTGTGTGTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTTGAAGATGATGAAGTGATGCAGTAAGGTGTGCTGTGTGTCCCT  400

seq1  AGAATGGTAAGCAAATGTTAGTTTAAGGCTAATGAGTAAAGAGCATACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTAAGCAAATGTTAGTTTAAGGCTAATGAGTAAAGAGCATACCA  450

seq1  TTATATGCTAATAGATAAAGTTGATTTGTATAAAACACATCAGTGTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATGCTAATAGATAAAGTTGATTTGTATAAAACACATCAGTGTCTCT  500

seq1  TCATTAAGCTATCCAATTCCTATTTGGCAGTTAAGAGCATCTCTTGTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAGCTATCCAATTCCTATTTGGCAGTTAAGAGCATCTCTTGTGGC  550

seq1  TAGAACAATGGTTCAGCAACCAGAAACACTTATTGTTCTTCCAGAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAATGGTTCAGCAACCAGAAACACTTATTGTTCTTCCAGAAGACA  600

seq1  CAGGCTTCAAAACTGCCTACAGCTTCAGATCCAGGATATCTGATACCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTCAAAACTGCCTACAGCTTCAGATCCAGGATATCTGATACCCTT  650

seq1  TCCTGGCTTCTTTGAACATCTGCCTTACTCATGGCAAACAAGAACTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTTCTTTGAACATCTGCCTTACTCATGGCAAACAAGAACTCAAG  700

seq1  CTAGCACACACACATACACACAGACAACCCCCAAATACAATATTTTATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACACACACATACACACAGACAACCCCCAAATACAATATTTTATGA  750

seq1  AATCTTAAAAACCATCATCTCTTTCACAGGCTCATTATTATCCCCCTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAAAAACCATCATCTCTTTCACAGGCTCATTATTATCCCCCTGAT  800

seq1  AAAATACAAATGTTAATCACACAACGTTCCCTAAATTGCCTGTTTTCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAAATGTTAATCACACAACGTTCCCTAAATTGCCTGTTTTCTTG  850

seq1  AAACACTGTAAATTATAAAGCATATCAGTAAATTTTGAGTATGTGCCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGTAAATTATAAAGCATATCAGTAAATTTTGAGTATGTGCCATT  900

seq1  GAATATGCACATAATTTAGTTATAAATTCTATACATGAACTTCTTTAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCACATAATTTAGTTATAAATTCTATACATGAACTTCTTTAGTG  950

seq1  ATTACAAATACAGCTATAGATCCAGGATGCACCAATTCAAATTCTAAATC  1000
      | |||||||||||||||||||||||||||||||||||| |||||||||||
seq2  A-TACAAATACAGCTATAGATCCAGGATGCACCAATTC-AATTCTAAATC  998

seq1  TGCTTGTATTAAAATCCTATACT-GGTGTGATATTAAGCAAGATATTTCA  1049
      ||||||||||||||||||||||| |||||||| || ||| ||||  ||||
seq2  TGCTTGTATTAAAATCCTATACTGGGTGTGAT-TTTAGC-AGATTATTCA  1046

seq1  TTAATCTCTCTCAATTTCCTTCATTTTAAAAGGCAGAACTAACATCATAG  1099
       ||||||||||| |||||  ||||||   || |||| |||||||||||||
seq2  -TAATCTCTCTC-ATTTC--TCATTT---AAAGCAG-ACTAACATCATAG  1088

seq1  TTCTTCATTGTGTTAACACTGTGTTCTTTGTTCAGTTAATTATGTGATAC  1149
      |   ||| || ||    |||  |||||||| |||||||  ||||||||||
seq2  T--CTCA-TGGGT---AACTTGGTTCTTTG-TCAGTTA--TATGTGATAC  1129

seq1  CACCAACTATGA  1161
      |||| |||||||
seq2  CACC-ACTATGA  1140

seq1: chr7_62602630_62603674
seq2: B6Ng01-146P16.g_67_1114 (reverse)

seq1  TGCATTACAATG-ATTATGGA-GAATGCTAGGCTTCATCACTGTCCAATA  48
      |||||||||||| |||||||| |||||||| || |||||||||||| |||
seq2  TGCATTACAATGAATTATGGAGGAATGCTA-GCCTCATCACTGTCCCATA  49

seq1  TGCAGAAAATAAGCCCAGAACAAGTAACTTAAA-TCAACCCCATAAGACT  97
      |||||||| |||||||||||||||||||||||| ||||||||   |||||
seq2  TGCAGAAATTAAGCCCAGAACAAGTAACTTAAATTCAACCCCCATAGACT  99

seq1  GAGGGAACAATAC-AAAAAAAAAAAAAAAAGAGCTAGGAAATGCAAAAGA  146
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGGGAACAATACAAAAAAAAAAAAAAAAAGAGCTAGGAAATGCAAAAGA  149

seq1  ACCAGAAGATAGGGTTAAAGGTAGCAAGACAAACAGTCCCTAGATTGGTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGATAGGGTTAAAGGTAGCAAGACAAACAGTCCCTAGATTGGTT  199

seq1  ATTATAACCATTAACTCACATCAACCTCAGATGCCTGCAGTGGATCAATA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAACCATTAACTCACATCAACCTCAGATGCCTGCAGTGGATCAATA  249

seq1  TAGGACCAGCCCTATAAATAAATTCCATCAAGGATGGGTGAAATGGCTCG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCAGCCCTATAAATAAATTCCATCAAGGATGGGTGAAATGGCTCG  299

seq1  CAAGACCCTTTCCTTTACTCTGAAATTTTAGCTATCAATAGATTTTTGTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCCTTTCCTTTACTCTGAAATTTTAGCTATCAATAGATTTTTGTG  349

seq1  AGAAGAGGAGTCACTATCATTAGTTGTGGGCCATCTGCTTAGATCATCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGAGTCACTATCATTAGTTGTGGGCCATCTGCTTAGATCATCAG  399

seq1  ACTCAAACAAATAGGTCCATACCCATGGTCACAAAGACAACCCTTTTTAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAACAAATAGGTCCATACCCATGGTCACAAAGACAACCCTTTTTAA  449

seq1  TCTAGGTGAATCACAAACCAAATAGACGTAAGCATGAGAGAATGTGTGAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGTGAATCACAAACCAAATAGACGTAAGCATGAGAGAATGTGTGAA  499

seq1  GAGTATAGATAAGAGTAGAAGGGAAGCGGGAAGTGAGAACAATGAATATG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAGATAAGAGTAGAAGGGAAGCGGGAAGTGAGAACAATGAATATG  549

seq1  CAAGTTATACACATCTAAATTGCAAAATAAAATTTTAATCAACTAAATAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTATACACATCTAAATTGCAAAATAAAATTTTAATCAACTAAATAA  599

seq1  GTAAATGTATAAAAAATAAAAACATTAATAATCTCTTCTTAAATTTTCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGTATAAAAAATAAAAACATTAATAATCTCTTCTTAAATTTTCTT  649

seq1  CCTAAGTTCTGTTCCCCTAGTATTCAATTAGTTATTTTATCTTTTTAATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTTCTGTTCCCCTAGTATTCAATTAGTTATTTTATCTTTTTAATA  699

seq1  TTCATATATTCTTCATATAATTGGAGATAAATATTATGTGTCATCATTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATATTCTTCATATAATTGGAGATAAATATTATGTGTCATCATTGT  749

seq1  TACATTTCCATTTTTATTCTATGTTTAGTTTTTAAAATAAGGTATGTGAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCATTTTTATTCTATGTTTAGTTTTTAAAATAAGGTATGTGAA  799

seq1  ATTTAACTTAGTTGCATTAGTTTGTCTTTTTTATGTCTTCTACTTCTTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACTTAGTTGCATTAGTTTGTCTTTTTTATGTCTTCTACTTCTTTC  849

seq1  TCAAATACACAACAAACACACATAATGATACATTTATTTTAATACTATGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATACACAACAAACACACATAATGATACATTTATTTTAATACTATGT  899

seq1  TTCAATTTTCTCATTTTGTGTCCAGAAAATATTAGAGAAGTAATCATTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTTCTCATTTTGTGTCCAGAAAATATTAGAGAAGTAATCATTGA  949

seq1  AATGAATTTATAAAATTCAACGGACCTTCAGCAATGAATGAAAGACTTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTTATAAAATTCAACGGACCTTCAGCAATGAATGAAAGACTTCC  999

seq1  TAGAAATGGGAAGAATTCTTTTTAAAATTAATTTTAAAAGGAAGAATTC  1045
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATGGGAAGAATTCTTTTTAAAATTAATTTTAAAAGGAAGAATTC  1048