BAC Information

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BAC

Clone NameB6Ng01-147A12
Chromosome7 (Build37)
Map Location 102,188,723 - 102,239,065
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545982, EG666816, LOC100040132
Downstream geneLOC666823, Frda-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147A12.bB6Ng01-147A12.g
ACCDH944022DH944023
length1,122889
definitionDH944022|Mus musculus domesticus DNA, BAC clone: B6Ng01-147A12, 5' end.DH944023|Mus musculus domesticus DNA, BAC clone: B6Ng01-147A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,237,922 - 102,239,065)(102,188,723 - 102,189,624)
sequence
gaattctttctctttgctgtgtcttaattgttgttctttcaaacatcaaa
attatccaaaatatctgaccagtttaacattcttgtcaaaatacatctat
aaaccatttccttgttctctgttctttttggactgtacaaacatttattt
ctatagtgaatataatctgttggaatatctgtggctattgtcatagtata
tatttaagttagcagaggtactttaatattttaatctcagatctgaaaac
ttataaattactactgacctggattaaatagatgacagtaaataggacac
tgacacagaaagtcaaatattttctcttttcttttacagagacaaaccat
caaaataacaagcaaataactgccttcctacctgggcccatcacccacct
acacacaattgcttgtgaaattcaaagaaattttctatggtgagtgctcg
cttcaagaaacagaaaagagcaagaaatacaatgaaaatgcaccaagagt
ctccgactctgtggtcacgttgctgaaatgatcccagtttatctttagaa
tgatcctgtgaggtttgtttccaaagccatgtgcagtactcaatctctaa
ctttggagaccctggggataaatgcacatagtgctcacaagaaactaaag
acattgctcattgttttccctggtacagacccagatgacttctgccttgt
tttatattctacattatagggaatgacatcatttatactaggtgaagggg
aaacgttgtcagagataaattagattgctgtcctgtcacaataaaggcct
catctttcattgtgaagactccaaatccttcccaaagcaccagggaaata
caaacagcattcatacaacaaaaggacagcaagatgctttcatgggaatc
tatccctacaaaagacaaattcttctatggagacaatctgaatgcccctc
cagtagtacaacaatgaatggccaagctcctgaggtcatattattcatat
ttggggtatttttgttgtctgtgacatgccaaaaagtagagtatatcgaa
gtagatgattgttaaaagactcatttcacctgtcattctgaaatactcct
ctgaagcatcatttatatctgc
gaattcataagtgaacaatatttttaaatgtcccaatttaaataaaatta
catcttttctctccccgttcctcatttcagcccctccaagccccttctct
caaacccctcaagttggtatcctcttttactttgattttattgttgcata
cataattgtatgtatatgaatgtatgtgtctgtacaaatacatacacatg
aaaactgctgagtccatatttataattggtttataaatggtttcaaggtt
aagccccaggggtgaaactttttcatttattttgtttatgtatgtattta
cttatttatctgtattggctttagataggatctctctatttaaccctgac
tctcctggaacttggtatgtagaccaagcttgctttaactcacacagatt
acctgccaatctagtggctctttccttagagagattctgggattcttttt
tattgttgttttgttttttatttttttgttttttgtttttgagacagggt
ttctctgtatagcactggctgtcctggaactcactttgtagacccggctg
gcctcgaactcagaaatctgcctgcctctgcctccctagtgcttggatta
aaggagtgtgctaccacgcccagcagattctgggattcctgtgtgactct
tctttcttatccttagtatctgtgataccatccattgcaatcatgccaca
gtgatggtaaactgttgtctcatattcttccttccttctttcttttcttt
tctttcttttcttttcttttctttcttcttctttctttctttctttttct
tccctcttccttccttcctttcttcttccctcctttctttcttccctcct
tccttccttcctttcttcttccctccttctttctccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102237922_102239065
seq2: B6Ng01-147A12.b_46_1167 (reverse)

seq1  GCAGATAAATAAAATAGATGCTTCAGAGAAGGTTATTTTCCAGAATTGAC  50
      ||||||  |||||   |||||||||||| ||  |||||  ||||| ||||
seq2  GCAGAT--ATAAA--TGATGCTTCAGAGGAG--TATTT--CAGAA-TGAC  41

seq1  AGGTGAAATGAGTCCTTTTTAACAATCATCTACTTTCGATTATACTCTAC  100
      ||||||||||||||  ||||||||||||||||| ||||| ||||||||| 
seq2  AGGTGAAATGAGTC--TTTTAACAATCATCTAC-TTCGA-TATACTCTA-  86

seq1  CTTTTTGGCATGTCAACAAGACAAACAAAAATACCCCCAAAATATGAATA  150
      |||||||||||||||   |||| ||||||||||||||  |||||||||| 
seq2  CTTTTTGGCATGTCA--CAGAC-AACAAAAATACCCC--AAATATGAAT-  130

seq1  AATATGACCTCAGGGAGCTTGGCCATTCATTGTTGTACTACTGGAGGGGC  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATATGACCTCA-GGAGCTTGGCCATTCATTGTTGTACTACTGGAGGGGC  179

seq1  ATTCAGATTTGTCTCCATAGAAGAATTTGTCTTTTGTAGGGATAGATTCC  250
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGA-TTGTCTCCATAGAAGAATTTGTCTTTTGTAGGGATAGATTCC  228

seq1  CATGAAAGCATCTTGCTGTCCTTTTGTTGTATGAATGCTGTTTGTATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGCATCTTGCTGTCCTTTTGTTGTATGAATGCTGTTTGTATTTC  278

seq1  CCTGGTGCTTTGGGAAGGATTTGGAGTCTTCACAATGAAAGATGAGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGCTTTGGGAAGGATTTGGAGTCTTCACAATGAAAGATGAGGCCT  328

seq1  TTATTGTGACAGGACAGCAATCTAATTTATCTCTGACAACGTTTCCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGACAGGACAGCAATCTAATTTATCTCTGACAACGTTTCCCCTT  378

seq1  CACCTAGTATAAATGATGTCATTCCCTATAATGTAGAATATAAAACAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAGTATAAATGATGTCATTCCCTATAATGTAGAATATAAAACAAGG  428

seq1  CAGAAGTCATCTGGGTCTGTACCAGGGAAAACAATGAGCAATGTCTTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCATCTGGGTCTGTACCAGGGAAAACAATGAGCAATGTCTTTAG  478

seq1  TTTCTTGTGAGCACTATGTGCATTTATCCCCAGGGTCTCCAAAGTTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTGAGCACTATGTGCATTTATCCCCAGGGTCTCCAAAGTTAGAG  528

seq1  ATTGAGTACTGCACATGGCTTTGGAAACAAACCTCACAGGATCATTCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTACTGCACATGGCTTTGGAAACAAACCTCACAGGATCATTCTAA  578

seq1  AGATAAACTGGGATCATTTCAGCAACGTGACCACAGAGTCGGAGACTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACTGGGATCATTTCAGCAACGTGACCACAGAGTCGGAGACTCTT  628

seq1  GGTGCATTTTCATTGTATTTCTTGCTCTTTTCTGTTTCTTGAAGCGAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATTTTCATTGTATTTCTTGCTCTTTTCTGTTTCTTGAAGCGAGCA  678

seq1  CTCACCATAGAAAATTTCTTTGAATTTCACAAGCAATTGTGTGTAGGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCATAGAAAATTTCTTTGAATTTCACAAGCAATTGTGTGTAGGTGG  728

seq1  GTGATGGGCCCAGGTAGGAAGGCAGTTATTTGCTTGTTATTTTGATGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGGCCCAGGTAGGAAGGCAGTTATTTGCTTGTTATTTTGATGGTT  778

seq1  TGTCTCTGTAAAAGAAAAGAGAAAATATTTGACTTTCTGTGTCAGTGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTAAAAGAAAAGAGAAAATATTTGACTTTCTGTGTCAGTGTCC  828

seq1  TATTTACTGTCATCTATTTAATCCAGGTCAGTAGTAATTTATAAGTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTGTCATCTATTTAATCCAGGTCAGTAGTAATTTATAAGTTTTC  878

seq1  AGATCTGAGATTAAAATATTAAAGTACCTCTGCTAACTTAAATATATACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGAGATTAAAATATTAAAGTACCTCTGCTAACTTAAATATATACT  928

seq1  ATGACAATAGCCACAGATATTCCAACAGATTATATTCACTATAGAAATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATAGCCACAGATATTCCAACAGATTATATTCACTATAGAAATAA  978

seq1  ATGTTTGTACAGTCCAAAAAGAACAGAGAACAAGGAAATGGTTTATAGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTACAGTCCAAAAAGAACAGAGAACAAGGAAATGGTTTATAGAT  1028

seq1  GTATTTTGACAAGAATGTTAAACTGGTCAGATATTTTGGATAATTTTGAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGACAAGAATGTTAAACTGGTCAGATATTTTGGATAATTTTGAT  1078

seq1  GTTTGAAAGAACAACAATTAAGACACAGCAAAGAGAAAGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAGAACAACAATTAAGACACAGCAAAGAGAAAGAATTC  1122

seq1: chr7_102188723_102189624
seq2: B6Ng01-147A12.g_69_947

seq1  GAATTCATAAGTGAACAATATTTTTAAATGTCCCAATTTAAATAAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGTGAACAATATTTTTAAATGTCCCAATTTAAATAAAATTA  50

seq1  CATCTTTTCTCTCCCCGTTCCTCATTTCAGCCCCTCCAAGCCCCTTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTCTCTCCCCGTTCCTCATTTCAGCCCCTCCAAGCCCCTTCTCT  100

seq1  CAAACCCCTCAAGTTGGTATCCTCTTTTACTTTGATTTTATTGTTGCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCCTCAAGTTGGTATCCTCTTTTACTTTGATTTTATTGTTGCATA  150

seq1  CATAATTGTATGTATATGAATGTATGTGTCTGTACAAATACATACACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTGTATGTATATGAATGTATGTGTCTGTACAAATACATACACATG  200

seq1  AAAACTGCTGAGTCCATATTTATAATTGGTTTATAAATGGTTTCAAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGCTGAGTCCATATTTATAATTGGTTTATAAATGGTTTCAAGGTT  250

seq1  AAGCCCCAGGGGTGAAACTTTTTCATTTATTTTGTTTATGTATGTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCAGGGGTGAAACTTTTTCATTTATTTTGTTTATGTATGTATTTA  300

seq1  CTTATTTATCTGTATTGGCTTTAGATAGGATCTCTCTATTTAACCCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATCTGTATTGGCTTTAGATAGGATCTCTCTATTTAACCCTGAC  350

seq1  TCTCCTGGAACTTGGTATGTAGACCAAGCTTGCTTTAACTCACACAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGAACTTGGTATGTAGACCAAGCTTGCTTTAACTCACACAGATT  400

seq1  ACCTGCCAATCTAGTGGCTCTTTCCTTAGAGAGATTCTGGGATTCTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCAATCTAGTGGCTCTTTCCTTAGAGAGATTCTGGGATTCTTTTT  450

seq1  TATTGTTGTTTTGTTTTTTATTTTTTTGTTTTTTGTTTTTGAGACAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTGTTTTGTTTTTTATTTTTTTGTTTTTTGTTTTTGAGACAGGGT  500

seq1  TTCTCTGTATAGCACTGGCTGTCCTGGAACTCACTTTGTAGACCCGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATAGCACTGGCTGTCCTGGAACTCACTTTGTAGACCCGGCTG  550

seq1  GCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCTAGTGCTTGGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCTAGTGCTTGGATTA  600

seq1  AAGGAGTGTGCTACCACGCCCAGCAGATTCTGGGATTCCTGTGTGACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTGTGCTACCACGCCCAGCAGATTCTGGGATTCCTGTGTGACTCT  650

seq1  TCTTTCTTATCCTTAGTATCTGTGATACCATCCATTGCAATCATGCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTATCCTTAGTATCTGTGATACCATCCATTGCAATCATGCCACA  700

seq1  GTGATGGTAAACTGTTGTCTCATATTCTTCCTTCCTTCTTTTCTTTTCTT  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGATGGTAAACTGTTGTCTCATATTCTTCCTTCCTTC-TTTCTTTTCTT  749

seq1  TTCTTTTCTTTTCTTTTCTTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  800
      ||| |||||||||||||||||||||||||   ||||||||||||||| ||
seq2  TTC-TTTCTTTTCTTTTCTTTTCTTTCTT--CTTCTTTCTTTCTTTC-TT  795

seq1  TTTCTTCCCTCTTCCTTCCTTCCTTTCTTTCTTCCCTCCTTTCTTTCTTC  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTCTTCCCTCTTCCTTCCTTCCTTTC-TTCTTCCCTCCTTTCTTTCTTC  844

seq1  CCTCCTTCCTTCCTTCCTTTCTTTCTTCCCTCCTTTCTTTCTTCCCTCCT  900
      |||||||||||||||||||||                 ||||||||||||
seq2  CCTCCTTCCTTCCTTCCTTTC-----------------TTCTTCCCTCCT  877

seq1  TC  902
      ||
seq2  TC  879