BAC Information

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BAC

Clone NameB6Ng01-147F01
Chromosome7 (Build37)
Map Location 133,994,485 - 134,161,380
singlet/doubletdoublet
Overlap geneDoc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik
Upstream geneD430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik
Downstream geneMaz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147F01.bB6Ng01-147F01.g
ACCDH944231DH944232
length909526
definitionDH944231|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F01, 5' end.DH944232|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,160,470 - 134,161,380)(133,994,485 - 133,995,016)
sequence
gaattcaaaacaaaacaaacaaacaaaaacaggaccaaagttcccagctg
cagggagcaagggaagggtgggggagctctgtaattattctctaagagga
tgagggaggtttgttgcacgcgacagccctctgaggaggcagagagccag
ctgcgatgcatttcagagttggcggggttttttgtttgtttcctttcttt
tttaaaaaaaaaaaaaaaagttgggggaaaactaaaattccttttcaaaa
aataaaactgagtctccctttttgtatgctgaatgctgcatgagtcttaa
acactaataaacagagaatgcatgagactggcctcagttggtccctgtgt
ttgcagagtcaaggtactgctttctggcaggccctactgaacggaatacg
catgcgctgccgcagtggccatctttagtatgggccgaggttaatgagtc
ctaagggccaaattgcgcatgcgcaagtcttctctttcctcttccaagta
gctttgactaccgcggagcctccgcgcgccatttctctgcgcctgcgtac
tgagatgctgcgcagcctgggaggcgggttttagctccaggtttgtaccg
ctgctgagtagacgcgaactaggtttgcccggtctaaaaagatgacttcc
atcccggtgatggagaaggcgatgtgaaagcgagaaaacaggcccttccc
tttccagctccgagcgtgtttcctgcgggtccctgggaacggcagaattc
tgggtccgtgggtggggtctgtccttgcagggtttgagcgccccctcctg
gggacggtgctctggccgcagtcactgtggaactgactggcgatttccta
gacctgaaaggctcttccagccttttcgggtgaggcgcactgggtttgga
actcagaat
attggggagatccgagtgcccctccgccgcctcaagccttcacagaagaa
gcattttaacatctgccttgagcgccaggtcccggtccgtgtgggtctaa
caggtacgggggaggggatctggaaaggtcagcttgccagaaccttttct
ttccccccctcagcttccttcaccctcttcaatgtctgcggcgctgaggg
gcatatcctgttacctgaaggaggtgaggcgaatgatgccgagagccctg
tctgggtgggaggtggggagagcctgtagactcacctctgcccccttctc
tggcagctggagcaggcagagcagggacctgggctgctggaagagcgcgg
gcgcttcctgctgagcctcagctacagctctcggcggcatgggctgctgg
tgggcattgttcgctgtgcgcacctggctgcaatggatgttaacggctac
tctgacccttatgtgaagacgtgagcccttgcccaagcctgaccccagcc
taactgctctggggcctagcctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134160470_134161380
seq2: B6Ng01-147F01.b_43_951 (reverse)

seq1  ATTCTAGAGTACCAAA-CCAGTGCGCCTCACCCG-AAAGGCTGG-AGAGC  47
      ||||| |||| ||||| ||||||||||||||||| ||||||||| |||||
seq2  ATTCT-GAGTTCCAAACCCAGTGCGCCTCACCCGAAAAGGCTGGAAGAGC  49

seq1  CTTTCTAGGTCTAGGAAATCGCCAGTCAGTCCAACAGCTGACTGCGGCCA  97
      ||||| |||||||||||||||||||||||| | |||| ||||||||||||
seq2  CTTTC-AGGTCTAGGAAATCGCCAGTCAGTTCCACAG-TGACTGCGGCCA  97

seq1  GAGCACCGTCCCCAGGAGGGGGCGCTCAAACCCCTGCAAGGACAGACCCC  147
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAGCACCGTCCCCAGGAGGGGGCGCTCAAA-CCCTGCAAGGACAGACCCC  146

seq1  ACCCCACGGACCCAGAATTCTGCCGTTCCCAGGGACCCGCAGGAAACACG  197
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CCCACGGACCCAGAATTCTGCCGTTCCCAGGGACCCGCAGGAAACACG  195

seq1  CTCGGAGCTGGAAAGGGAAGGGCCTGTTTTCTCGCTTTCACATCGCCTTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAGCTGGAAAGGGAAGGGCCTGTTTTCTCGCTTTCACATCGCCTTC  245

seq1  TCCATCACCGGGATGGAAGTCATCTTTTTAGACCGGGCAAACCTAGTTCG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCACCGGGATGGAAGTCATCTTTTTAGACCGGGCAAACCTAGTTCG  295

seq1  CGTCTACTCAGCAGCGGTACAAACCTGGAGCTAAAACCCGCCTCCCAGGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTACTCAGCAGCGGTACAAACCTGGAGCTAAAACCCGCCTCCCAGGC  345

seq1  TGCGCAGCATCTCAGTACGCAGGCGCAGAGAAATGGCGCGCGGAGGCTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCAGCATCTCAGTACGCAGGCGCAGAGAAATGGCGCGCGGAGGCTCC  395

seq1  GCGGTAGTCAAAGCTACTTGGAAGAGGAAAGAGAAGACTTGCGCATGCGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTAGTCAAAGCTACTTGGAAGAGGAAAGAGAAGACTTGCGCATGCGC  445

seq1  AATTTGGCCCTTAGGACTCATTAACCTCGGCCCATACTAAAGATGGCCAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGCCCTTAGGACTCATTAACCTCGGCCCATACTAAAGATGGCCAC  495

seq1  TGCGGCAGCGCATGCGTATTCCGTTCAGTAGGGCCTGCCAGAAAGCAGTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGCAGCGCATGCGTATTCCGTTCAGTAGGGCCTGCCAGAAAGCAGTA  545

seq1  CCTTGACTCTGCAAACACAGGGACCAACTGAGGCCAGTCTCATGCATTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACTCTGCAAACACAGGGACCAACTGAGGCCAGTCTCATGCATTCT  595

seq1  CTGTTTATTAGTGTTTAAGACTCATGCAGCATTCAGCATACAAAAAGGGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTATTAGTGTTTAAGACTCATGCAGCATTCAGCATACAAAAAGGGA  645

seq1  GACTCAGTTTTATTTTTTGAAAAGGAATTTTAGTTTTCCCCCAACTTTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTTTTATTTTTTGAAAAGGAATTTTAGTTTTCCCCCAACTTTTT  695

seq1  TTTTTTTTTTTAAAAAAGAAAGGAAACAAACAAAAAACCCCGCCAACTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTAAAAAAGAAAGGAAACAAACAAAAAACCCCGCCAACTCT  745

seq1  GAAATGCATCGCAGCTGGCTCTCTGCCTCCTCAGAGGGCTGTCGCGTGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCATCGCAGCTGGCTCTCTGCCTCCTCAGAGGGCTGTCGCGTGCA  795

seq1  ACAAACCTCCCTCATCCTCTTAGAGAATAATTACAGAGCTCCCCCACCCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCTCCCTCATCCTCTTAGAGAATAATTACAGAGCTCCCCCACCCT  845

seq1  TCCCTTGCTCCCTGCAGCTGGGAACTTTGGTCCTGTTTTTGTTTGTTTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTGCTCCCTGCAGCTGGGAACTTTGGTCCTGTTTTTGTTTGTTTGT  895

seq1  TTTGTTTTGAATTC  911
      ||||||||||||||
seq2  TTTGTTTTGAATTC  909

seq1: chr7_133994485_133995016
seq2: B6Ng01-147F01.g_68_599

seq1  GAATTCATTGGGGAGATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGGGAGATCCGAGTGCCCCTCCGCCGCCTCAAGCCTTCACA  50

seq1  GAAGAAGCATTTTAACATCTGCCTTGAGCGCCAGGTCCCGGTCCGTGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCATTTTAACATCTGCCTTGAGCGCCAGGTCCCGGTCCGTGTGG  100

seq1  GTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCAGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAACAGGTACGGGGGAGGGGATCTGGAAAGGTCAGCTTGCCAGAACC  150

seq1  TTTTCTTTCCCCCCCTCAGCTTCCTTCACCCTCTTCAATGTCTGCGGCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCCCCCCCTCAGCTTCCTTCACCCTCTTCAATGTCTGCGGCGC  200

seq1  TGAGGGGCATATCCTGTTACCTGAAGGAGGTGAGGCGAATGATGCCGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCATATCCTGTTACCTGAAGGAGGTGAGGCGAATGATGCCGAGA  250

seq1  GCCCTGTCTGGGTGGGAGGTGGGGAGAGCCTGTAGACTCACCTCTGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTCTGGGTGGGAGGTGGGGAGAGCCTGTAGACTCACCTCTGCCCC  300

seq1  CTTCTCTGGCAGCTGGAGCAGGCAGAGCAGGGACCTGGGCTGCTGGAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGGCAGCTGGAGCAGGCAGAGCAGGGACCTGGGCTGCTGGAAGA  350

seq1  GCGCGGGCGCATCCTGCTGAGCCTCAGCTACAGCTCTCGGCGGCATGGGC  400
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCGCGGGCGCTTCCTGCTGAGCCTCAGCTACAGCTCTCGGCGGCATGGGC  400

seq1  TGCTGGTGGGCATTGTTCGCTGTGCGCACCTGGCTGCAATGGATGTTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGGGCATTGTTCGCTGTGCGCACCTGGCTGCAATGGATGTTAAC  450

seq1  GGCTACTCTGACCCTTATGTGAAGACGTGAGCCCTTGCCCAAGCCTGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTCTGACCCTTATGTGAAGACGTGAGCCCTTGCCCAAGCCTGACC  500

seq1  CCAGCCTAACTGCTCTGGGGCCTAGCCTGTCT  532
      |||||||||||||||||||||||||||||| |
seq2  CCAGCCTAACTGCTCTGGGGCCTAGCCTGTTT  532