BAC Information

Click to search

BAC

Clone NameB6Ng01-147G12
Chromosome7 (Build37)
Map Location 70,728,572 - 70,729,575
singlet/doubletsinglet
Overlap geneOtud7a
Upstream geneEG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7, LOC545971
Downstream geneLOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147G12.bB6Ng01-147G12.g
ACCDH944299DH944300
length1,0021,063
definitionDH944299|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G12, 5' end.DH944300|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttgctcttccctaagctagccaggttatggtatttggcataaactgttca
tcactatgtactcctgtctttgtgatttccacagtctcgtctgttctggg
atctcttctgagccataaacagagtaggaagaattactcataatctcaga
caatggacgcagacttattatcctccccatataacttctgatgtggggac
atcatacaaagtgtaagggagggaacagagccttgctggattcattcttt
ccagtgggaagcaaattggaaatggtaactccatttctttattcatattc
taatgatcccttctaattctgggtttgatgaagcaatcaaaaaactgtga
ctaagaatggaagtatattttgtaagtggaggaggcctgagtatgtgaaa
tctggtcataatctccaagacaagttgctttaaaatggtgtgaggactag
agctttagctcaggattaaagtgttaaagcctttacctggtatggacaag
atcctaggatcaattccagaagaagaaaaggaaataagaagggggggcag
aaaatattggggaaaggaggaaggaaaggatcgatctgggctttatggat
tatacttgtaatcacagagatttggaggctgaagcaagaaaatgctccaa
tctggtgttactggggtctcaaggaaccaaagcacagacatacacatgct
cacgaatgcatgattatgtatcagctgaaaatctgtcaactaataaggtc
agtagttcagggaactgactgccactgaagagatagttgtgatgcagcag
aatagcacaggcctttaccaccagttcctctggatagaaaacttcaaggg
cagcctagactacagagtgggtgcaggcttaagcttggaactttattgag
aagccctttctccacctttcaaagtaaagagaggcttgaggtgtgcctca
gcattgtctagcttagaaaatcctctgcatttgatcctgctactgtaagg
aa
gaattccttaaggaggaggagggtggtcagatgatcaatacagcagcagt
gagggattcgaaacaagacagtgaaggatggaacatacaggggaggggga
gacaggacggagtctctggccagtcttgaacaaataagcagtatgtatgc
atatctatatctatgcccttatttgtccatccatccatccatccatccat
ccatccatccatccatccatccagtttgaaaagtactggctagtaaagag
gatagtcttccaagtggtctttgataaaaccaatcatctctcactttttc
tcacctctaatatccagtaactctagaatgttctagaatcctgagataag
gaaggatgtggtaagaccagctctggctgtcacattctgtaacaaatgtc
cttcttttttttttttttccattttttattaggtatttcgctcatttaca
tttgcaatgctataccaaaagtcccccatagccacccaccccctctcccc
tacccacccactccccttttatggccctggcgttcccctgtactggggca
tataaagtttgcgtgtccaatgggcctctctttccagtgatggccgacta
ggccatcttttgatgcatatgcagctagagtcaagagctccggggtactg
gttagttcataatgttgttccacctataggggttgcagatccctttagct
tctttggtactttctcaagctccttcattgggggccatgtgatccatcca
atagccgactgtgagcattccacttctatatttgctaggcccaggcatac
tctgacaagagacagctatatcagggtcctttcagcataatcttgctagt
gtatgcaatggtgtcagcattggaagctgattatgggatggatccctgat
atggagtgtctacatggtccatccttttatctaactccaaattttgtctc
gtaacctccttccaagggtggttttgtcccccttctagagggggcttagt
gttcacatttcagcctcttttttctggagttcagtggtgagaagtgaact
tatactggagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70728572_70729575
seq2: B6Ng01-147G12.b_55_1056

seq1  TTGCTCTTCCCTAAGCTAGCCAGGTTATGGTATTTGGCATAAACTGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTCCCTAAGCTAGCCAGGTTATGGTATTTGGCATAAACTGTTCA  50

seq1  TCACTATGTACTCCTGTCTTTGTGATTTCCACAGTCTCGTCTGTTCTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGTACTCCTGTCTTTGTGATTTCCACAGTCTCGTCTGTTCTGGG  100

seq1  ATCTCTTCTGAGCCATAAACAGAGTAGGAAGAATTACTCATAATCTCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCTGAGCCATAAACAGAGTAGGAAGAATTACTCATAATCTCAGA  150

seq1  CAATGGACGCAGACTTATTATCCTCCCCATATAACTTCTGATGTGGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACGCAGACTTATTATCCTCCCCATATAACTTCTGATGTGGGGAC  200

seq1  ATCATACAAAGTGTAAGGGAGGGAACAGAGCCTTGCTGGATTCATTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACAAAGTGTAAGGGAGGGAACAGAGCCTTGCTGGATTCATTCTTT  250

seq1  CCAGTGGGAAGCAAATTGGAAATGGTAACTCCATTTCTTTATTCATATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGAAGCAAATTGGAAATGGTAACTCCATTTCTTTATTCATATTC  300

seq1  TAATGATCCCTTCTAATTCTGGGTTTGATGAAGCAATCAAAAAACTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATCCCTTCTAATTCTGGGTTTGATGAAGCAATCAAAAAACTGTGA  350

seq1  CTAAGAATGGAAGTATATTTTGTAAGTGGAGGAGGCCTGAGTATGTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATGGAAGTATATTTTGTAAGTGGAGGAGGCCTGAGTATGTGAAA  400

seq1  TCTGGTCATAATCTCCAAGACAAGTTGCTTTAAAATGGTGTGAGGACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCATAATCTCCAAGACAAGTTGCTTTAAAATGGTGTGAGGACTAG  450

seq1  AGCTTTAGCTCAGGATTAAAGTGTTAAAGCCTTTACCTGGTATGGACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAGCTCAGGATTAAAGTGTTAAAGCCTTTACCTGGTATGGACAAG  500

seq1  ATCCTAGGATCAATTCCAGAAGAAGAAAAGGAAATAAGAAGGGGGGGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGGATCAATTCCAGAAGAAGAAAAGGAAATAAGAAGGGGGGGCAG  550

seq1  AAAATATTGGGGAAAGGAGGAAGGAAAGGATCGATCTGGGCTTTATGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTGGGGAAAGGAGGAAGGAAAGGATCGATCTGGGCTTTATGGAT  600

seq1  TATACTTGTAATCACAGAGATTTGGAGGCTGAAGCAAGAAAATGCTCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTGTAATCACAGAGATTTGGAGGCTGAAGCAAGAAAATGCTCCAA  650

seq1  TCTGGTGTTACTGGGGTCTCAAGGAACCAAAGCACAGACATACACATGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTTACTGGGGTCTCAAGGAACCAAAGCACAGACATACACATGCT  700

seq1  CACGAATGCATGATTATGTATCAGCTGAAAATCTGTCAACTAATAAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAATGCATGATTATGTATCAGCTGAAAATCTGTCAACTAATAAGGTC  750

seq1  AGTAGTTCAGGGAACTGACTGCCACTGAAGAGATAGTTGTGATGCAGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCAGGGAACTGACTGCCACTGAAGAGATAGTTGTGATGCAGCAG  800

seq1  AATAGCACAGGCCTTTACCACCAGTTCCTCTGGATAGAAAAC-TCAAGGG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATAGCACAGGCCTTTACCACCAGTTCCTCTGGATAGAAAACTTCAAGGG  850

seq1  CAGCCTAGACTACAGAGTGGGTGCAAGGCTAAGCTTGGAAC-TTAATGAG  898
      ||||||||||||||||||||||||| |  |||||||||||| ||| ||||
seq2  CAGCCTAGACTACAGAGTGGGTGCAGGCTTAAGCTTGGAACTTTATTGAG  900

seq1  AAGCCCTTTCTCCACCTTTCAAAAAGTAAAGAGAAGGCTGAGGGTGTGAC  948
      ||||||||||||||||||||  ||||||||||| |||||   |||||| |
seq2  AAGCCCTTTCTCCACCTTTC--AAAGTAAAGAG-AGGCTTGAGGTGTGCC  947

seq1  TCAGCACTTGTCTAGCATAGAAAATCC-CTGCAATTGATTCCTGCTACTG  997
      |||||| ||||||||| |||||||||| ||||| |||| |||||||||||
seq2  TCAGCA-TTGTCTAGCTTAGAAAATCCTCTGCATTTGA-TCCTGCTACTG  995

seq1  TAAGGAA  1004
      |||||||
seq2  TAAGGAA  1002