BAC Information

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BAC

Clone NameB6Ng01-147O06
Chromosome7 (Build37)
Map Location 36,682,496 - 36,747,483
singlet/doubletdoublet
Overlap genenone
Upstream genePepd, Cebpg, Cebpa, Slc7a10, Wdr88, Gpatch1, Rhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507
Downstream geneLOC100043872, EG668988, LOC668507, Tshz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147O06.bB6Ng01-147O06.g
ACCDH944644DH944645
length5511,095
definitionDH944644|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O06, 5' end.DH944645|Mus musculus domesticus DNA, BAC clone: B6Ng01-147O06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,746,927 - 36,747,483)(36,682,496 - 36,683,599)
sequence
ctccagatttccaggtgtaagggcgatacagactttccaaactggagctc
cctgaccacagagggaagagtccttttcctgtgcattatgggatacgtac
ctgagaacagccttgaccttcagccagcagataccagtagcttcacccac
cacgctatggcgatcagaatgtttctgtccatggcctaaatgtctctgca
caggcaaatgcccctggacaagcaccaccgatctctaaaatctcttcctg
gtcccattctagcttgtgggaggacctgatggtgaatttcctcaagcgcc
cttcagcatatattgtgatttgaacaacccatgccctccatagcctatgt
atttgaacacttgatccccagttggtgacactgtttggggaaaattgagg
aagatttagtgggtggaggcttattagaggaagtatgtcactggaaaggc
tttgaaagtttaaagcctccccccacctcctgcagctgtctaccccacac
acacatgtggatgaaaacacaatcacccagcttcctgctcctgttttcat
g
gaattcttaatgcctcttttgagaactgtgttctgttcatttgcccgtga
ttggtttgagattatgttttcttaaatttattttatatgtattagtgtgt
gcccaggggaatttatgtgcaccccatgtgtgcagtgttcatgaaggcca
gagagggcgttagttctgaaattagagttacaggcagttatgagccactg
tgttgggtgctgggaacaaagtcaagtcctctggaagagcagccagtact
cttaaagtctaagccatctctccagctcctcattcattaagttgatcatt
tgaaattttggtgttttattcttgagttctttacatattctacatatcaa
tcccgcatgggatctgtgaagagagccacccccaccctgtcccctgcagg
ttttcccttcaccctggtcattatttcctttgctgagaagaaggcttttg
gcttggtggggatgccattcatttaccataaaccttgggatggataggtt
ttctgttaatgaatggaaagaccacactggggcccccaaccctgcaccca
gttgtcctagagtctttgtgccttttctgttacacagactggtatcagga
tgctggttagacgcccgtgttttatgtcaccttctggagctcactggctt
ttggtttgggtgtggatgacaggagtcacagtttcctttgacatatttgc
ctggagatggtccctagtgccagagtcccctcaaggcataggagccacct
ccagctctgcattcagggtccttggcacattttcttagcccccaggacct
cagtggttctatgaaggggtagatgccttaggaagatgatgggccttctt
cagaaataggggacatggtgcacagaaccagggcagtaggaagccaggag
aggtggggaccgagtcccttagcttggttagtagggacagcagagatttc
tttcttgtgtaatatgaagtgctcacttgacttcatgaaaaacaaaccct
tcaaaccacctgagcatctgttgccctgaagacattcatgaaatgcttta
gtaaataaaaaaataaagccgaacaaaaaagatagaagttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_36746927_36747483
seq2: B6Ng01-147O06.b_46_602 (reverse)

seq1  CATGAAAGCAGGAGCAGGAAGCTGGGTGATTGTGTTTTCATCCACATGTG  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAACAGGAGCAGGAAGCTGGGTGATTGTGTTTTCATCCACATGTG  50

seq1  TGTGTGGGGTAGACAGCTGCAGGAGGTGGGGGGAGGCTTTAAACTTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGGTAGACAGCTGCAGGAGGTGGGGGGAGGCTTTAAACTTTCAA  100

seq1  AGCCTTTCCAGTGACATACTTCCTCTAATAAGCCTCCACCCACTAAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTCCAGTGACATACTTCCTCTAATAAGCCTCCACCCACTAAATCT  150

seq1  TCCTCAATTTTCCCCAAACAGTGTCACCAACTGGGGATCAAGTGTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAATTTTCCCCAAACAGTGTCACCAACTGGGGATCAAGTGTTCAAA  200

seq1  TACATAGGCTATGGAGGGCATGGGTTGTTCAAATCACAATATATGCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGGCTATGGAGGGCATGGGTTGTTCAAATCACAATATATGCTGAA  250

seq1  GGGCGCTTGAGGAAATTCACCATCAGGTCCTCCCACAAGCTAGAATGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGCTTGAGGAAATTCACCATCAGGTCCTCCCACAAGCTAGAATGGGA  300

seq1  CCAGGAAGAGATTTTAGAGATCGGTGGTGCTTGTCCAGGGGCATTTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAGAGATTTTAGAGATCGGTGGTGCTTGTCCAGGGGCATTTGCCT  350

seq1  GTGCAGAGACATTTAGGCCATGGACAGAAACATTCTGATCGCCATAGCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGAGACATTTAGGCCATGGACAGAAACATTCTGATCGCCATAGCGT  400

seq1  GGTGGGTGAAGCTACTGGTATCTGCTGGCTGAAGGTCAAGGCTGTTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTGAAGCTACTGGTATCTGCTGGCTGAAGGTCAAGGCTGTTCTCA  450

seq1  GGTACGTATCCCATAATGCACAGGAAAAGGACTCTTCCCTCTGTGGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACGTATCCCATAATGCACAGGAAAAGGACTCTTCCCTCTGTGGTCAG  500

seq1  GGAGCTCCAGTTTGGAAAGTCTGTATCGCCCTTACACCTGGAAATCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCCAGTTTGGAAAGTCTGTATCGCCCTTACACCTGGAAATCTGGA  550

seq1  GGAATTC  557
      |||||||
seq2  GGAATTC  557

seq1: chr7_36682496_36683599
seq2: B6Ng01-147O06.g_69_1163

seq1  GAATTCTTAATGCCTCTTTTGAGAACTGTGTTCTGTTCATTTGCCCGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATGCCTCTTTTGAGAACTGTGTTCTGTTCATTTGCCCGTGA  50

seq1  TTGGTTTGAGATTATGTTTTCTTAAATTTATTTTATATGTATTAGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGAGATTATGTTTTCTTAAATTTATTTTATATGTATTAGTGTGT  100

seq1  GCCCAGGGGAATTTATGTGCACCCCATGTGTGCAGTGTTCATGAAGGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGGGAATTTATGTGCACCCCATGTGTGCAGTGTTCATGAAGGCCA  150

seq1  GAGAGGGCGTTAGTTCTGAAATTAGAGTTACAGGCAGTTATGAGCCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGCGTTAGTTCTGAAATTAGAGTTACAGGCAGTTATGAGCCACTG  200

seq1  TGTTGGGTGCTGGGAACAAAGTCAAGTCCTCTGGAAGAGCAGCCAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGTGCTGGGAACAAAGTCAAGTCCTCTGGAAGAGCAGCCAGTACT  250

seq1  CTTAAAGTCTAAGCCATCTCTCCAGCTCCTCATTCATTAAGTTGATCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGTCTAAGCCATCTCTCCAGCTCCTCATTCATTAAGTTGATCATT  300

seq1  TGAAATTTTGGTGTTTTATTCTTGAGTTCTTTACATATTCTACATATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTTTGGTGTTTTATTCTTGAGTTCTTTACATATTCTACATATCAA  350

seq1  TCCCGCATGGGATCTGTGAAGAGAGCCACCCCCACCCTGTCCCCTGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCATGGGATCTGTGAAGAGAGCCACCCCCACCCTGTCCCCTGCAGG  400

seq1  TTTTCCCTTCACCCTGGTCATTATTTCCTTTGCTGAGAAGAAGGCTTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTCACCCTGGTCATTATTTCCTTTGCTGAGAAGAAGGCTTTTG  450

seq1  GCTTGGTGGGGATGCCATTCATTTACCATAAACCTTGGGATGGATAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGGGGATGCCATTCATTTACCATAAACCTTGGGATGGATAGGTT  500

seq1  TTCTGTTAATGAATGGAAAGACCACACTGGGGCCCCCAACCCTGCACCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTAATGAATGGAAAGACCACACTGGGGCCCCCAACCCTGCACCCA  550

seq1  GTTGTCCTAGAGTCTTTGTGCCTTTTCTGTTACACAGACTGGTATCAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCCTAGAGTCTTTGTGCCTTTTCTGTTACACAGACTGGTATCAGGA  600

seq1  TGCTGGTTAGACGCCCGTGTTTTATGTCACCTTCTGGAGCTCACTGGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTTAGACGCCCGTGTTTTATGTCACCTTCTGGAGCTCACTGGCTT  650

seq1  TTGGTTTGGGTGTGGATGACAGGAGTCACAGTTTCCTTTGACATATTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTGGGTGTGGATGACAGGAGTCACAGTTTCCTTTGACATATTTGC  700

seq1  CTGGAGATGGTCCCTAGTGCCAGAGTCCCCTCAAGGCATAGGAGCCACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATGGTCCCTAGTGCCAGAGTCCCCTCAAGGCATAGGAGCCACCT  750

seq1  CCAGCTCTGCATTCAGGGTCCTTGGCACAATTTTCTTAGCCCCCAGGACC  800
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAGCTCTGCATTCAGGGTCCTTGGCAC-ATTTTCTTAGCCCCCAGGACC  799

seq1  TCAGTGGTTCTATGAAGGGGTAGATGCCTCAGGAAGATGATGGGCCTTCT  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCAGTGGTTCTATGAAGGGGTAGATGCCTTAGGAAGATGATGGGCCTTCT  849

seq1  TCAGAAATAGGGGACATGGTGCACAGAACCAGGGCAGTAGGAAGCCAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATAGGGGACATGGTGCACAGAACCAGGGCAGTAGGAAGCCAGGA  899

seq1  GAGGTGGGGACCGAGTCCCTTTAGCCTGGGTTAGTAGGGACAGCAGAGAT  950
      ||||||||||||||||||| |||| || ||||||||||||||||||||||
seq2  GAGGTGGGGACCGAGTCCC-TTAG-CTTGGTTAGTAGGGACAGCAGAGAT  947

seq1  TTCTTTCTTGTGTAAATATGAAGTGCTCACCTTGACTTCATGGAAAAACA  1000
      ||||||||||||| ||||||||||||||| ||||||||||| ||||||||
seq2  TTCTTTCTTGTGT-AATATGAAGTGCTCA-CTTGACTTCAT-GAAAAACA  994

seq1  AACCCTCCAAACACACCTGAGCAATCTG-TGCCCTGAAGACATTCATGAA  1049
      |||||| ||||| ||||||||| ||||| |||||||||||||||||||||
seq2  AACCCTTCAAAC-CACCTGAGC-ATCTGTTGCCCTGAAGACATTCATGAA  1042

seq1  ATGCCTTTAGTTAAATAAAAAATAAAGCAGAACAAAAAGGATAGGAAGTT  1099
      ||| ||||||| ||  |||||||||||| ||||||||| |||| ||||||
seq2  ATG-CTTTAGTAAATAAAAAAATAAAGCCGAACAAAAAAGATA-GAAGTT  1090

seq1  GGGGG  1104
      |||||
seq2  GGGGG  1095