BAC Information

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BAC

Clone NameB6Ng01-148A22
Chromosome7 (Build37)
Map Location 50,587,205 - 50,588,320
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715
Downstream geneSiglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148A22.bB6Ng01-148A22.g
ACCDH944766DH944767
length1,1191,182
definitionDH944766|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A22, 5' end.DH944767|Mus musculus domesticus DNA, BAC clone: B6Ng01-148A22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttagtgcatgttgaatgctgactccacgttgaagctctcccat
atttatggcagacatgatgcttttcttgtataaactgaggtgtgcctttt
gggtgatgtctttcccacagtttatatattcataaggcttctcactggtg
tgaattagtgatgcaatagcctgtgatgttttttggaagtttcttagaca
accctaaccacaactcaaaagagggcctatcatgcctagtattggggttt
gttggacagtcttttgctcttggaggtggtattttcagcctagatgaaaa
catttcatttaaaccacacacacacacacacacacacacacacacacaca
cacacacacacctatacaaagacatgtatcatagagttttttaggtagat
agtttatactatgactccttatgactttttcacacatcctgaccattatt
ttatgctccttcagtatttacctccctccctgtccctaactggagggcct
gcttttcccatttccccagtcagatcatttgtaccctgctgttttcttta
tgaaaagtgtggaggaccggctggctttgagtcacatttgcacgtttgct
gaagagatcaaaacaaagaagcaacacaagagaagtaggttttacacaga
atgagtttcatgctgtttctttctttcttttttttaaatgtgtatagtat
ccattctgaaaattacacttgtaaatattccaaggctttttgaatcaaaa
ccactacagcaggggctggtgaggttgttcagtagtaaaggcacttggca
cccatcctgatgccctaggctgacccaaaaaggtttttctctgacctcca
catgcaagtagcatcatgtgtgtgcagagaataggcatatgataaatata
tgtcattttttaaaaaagatttattttattattatatctaagtacactgt
agctgtcttcagatgcaccagaagatgcatcagatctcattacgatggtt
gtgagccaccatgtggttgctgggatttgaactcatgacctttcaaaaga
gcagccggtgctcttaaccacctgagccatctctccagccctagatgtca
atttttttttagttttttt
gaattctcctccttacatctagtgcactgtttccttaaagtgctttcaga
gtgaaacctcaccatgcccttcttgtgacacaaaagagaaacagtgcaca
ggaaaggatcagcctttaacgccatccttgggtgtggcgcagccatatct
gtgtccccaagatgaagatcagtgcttccttccgtgttctcgatctacat
ctcttcaaacaggctccagtgaaatccagatcactagaggatactttgaa
aacttacattgcgaatatgtggaaaaaatctgacaagatggtaaatttct
aaatatatataacgtacctaacaaaaagctagaagataaagacaatttaa
aagaccagtaataaacaatgagagtgaagcagtaattaagcctccttata
gggtctgcagaggtggctcagagatggttgcaagtactagatgctattgc
tgaggatccaaagtcagttcccagctccacgtggcagctcacaatcatca
gtaaatataattccaggggatttaactccttcttctgttttttttttttt
ttggcaccagggagacttgtggtgcacatatatgcatactgcattcacac
atacactaaaattaaaaataaacacagttcttaaaactgtccataaaaac
gcccaggatcagatggagtcagttctgaattatatcaaactttatgaaaa
cacaatacaaacacttttcaaaatagaagagaaaggaacactactgaatt
tagttgatgaagccagtattttcttgataccaaaaccaagataaaaacac
aaccatggggcaataatattctgaacagcccaaaagctacagaccaattt
tcctgtggcgggatgtaaaaattctcaataagatgattgcaaatcttgac
tcatggacacattaagaaggattgtattaccatgatctttctgggtatca
cctgagatgcaacattggtttcaacaacacagccataaacataattcaca
ataataacttatgagaagaaatcacaagatcattcttcatacatgtagaa
aaagacatttggataagctcatcatgacttctattaaaatcttgggatca
ggaatacaatccataccttcccatcaatgagaacagtcttatgactaaga
taacctataggccaagtgagggtatacgatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50587205_50588320
seq2: B6Ng01-148A22.b_48_1166

seq1  GAATTCTTTAGTGCATGTTGAATGCTGACTCCACGTTGAAGCTCTCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGTGCATGTTGAATGCTGACTCCACGTTGAAGCTCTCCCAT  50

seq1  ATTTATGGCAGACATGATGCTTTTCTTGTATAAACTGAGGTGTGCCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGCAGACATGATGCTTTTCTTGTATAAACTGAGGTGTGCCTTTT  100

seq1  GGGTGATGTCTTTCCCACAGTTTATATATTCATAAGGCTTCTCACTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATGTCTTTCCCACAGTTTATATATTCATAAGGCTTCTCACTGGTG  150

seq1  TGAATTAGTGATGCAATAGCCTGTGATGTTTTTTGGAAGTTTCTTAGACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGTGATGCAATAGCCTGTGATGTTTTTTGGAAGTTTCTTAGACA  200

seq1  ACCCTAACCACAACTCAAAAGAGGGCCTATCATGCCTAGTATTGGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAACCACAACTCAAAAGAGGGCCTATCATGCCTAGTATTGGGGTTT  250

seq1  GTTGGACAGTCTTTTGCTCTTGGAGGTGGTATTTTCAGCCTAGATGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACAGTCTTTTGCTCTTGGAGGTGGTATTTTCAGCCTAGATGAAAA  300

seq1  CATTTCATTTAAACCACACACACACACACACACACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCATTTAAACCACACACACACACACACACACACACACACACACACA  350

seq1  CACACACACACCTATACAAAGACATGTATCATAGAGTTTTTTAGGTAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACCTATACAAAGACATGTATCATAGAGTTTTTTAGGTAGAT  400

seq1  AGTTTATACTATGACTCCTTATGACTTTTTCACACATCCTGACCATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATACTATGACTCCTTATGACTTTTTCACACATCCTGACCATTATT  450

seq1  TTATGCTCCTTCAGTATTTACCTCCCTCCCTGTCCCTAACTGGAGGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTCCTTCAGTATTTACCTCCCTCCCTGTCCCTAACTGGAGGGCCT  500

seq1  GCTTTTCCCATTTCCCCAGTCAGATCATTTGTACCCTGCTGTTTTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCCCATTTCCCCAGTCAGATCATTTGTACCCTGCTGTTTTCTTTA  550

seq1  TGAAAAGTGTGGAGGACCGGCTGGCTTTGAGTCACATTTGCACGTTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGTGTGGAGGACCGGCTGGCTTTGAGTCACATTTGCACGTTTGCT  600

seq1  GAAGAGATCAAAACAAAGAAGCAACACAAGAGAAGTAGGTTTTACACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGATCAAAACAAAGAAGCAACACAAGAGAAGTAGGTTTTACACAGA  650

seq1  ATGAGTTTCATGCTGTTTCTTTCTTTCTTTTTTTTAAATGTGTATAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTCATGCTGTTTCTTTCTTTCTTTTTTTTAAATGTGTATAGTAT  700

seq1  CCATTCTGAAAATTACACTTGTAAATATTCCAAGGCTTTTTGAATCAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGAAAATTACACTTGTAAATATTCCAAGGCTTTTTGAATCAAAA  750

seq1  CCACTACAGCAGGGGCTGGTGAGGTTGTTCAGTAGTAAAGGCACTTGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACAGCAGGGGCTGGTGAGGTTGTTCAGTAGTAAAGGCACTTGGCA  800

seq1  CCCATCCTGATGCCCTAGGCTGACCCAAAAAGGTTTTTCTCTGACCTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCTGATGCCCTAGGCTGACCCAAAAAGGTTTTTCTCTGACCTCCA  850

seq1  CATGCAAGTAGCATCATGTGTGTGCAGAGAATAGGCATATGATAAATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAGTAGCATCATGTGTGTGCAGAGAATAGGCATATGATAAATATA  900

seq1  TGTCATTTTTTAAAAAAGATTTA-TTTATTATTATATCTAAGTACACTGT  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGTCATTTTTTAAAAAAGATTTATTTTATTATTATATCTAAGTACACTGT  950

seq1  AGCTGTCTTCAGATGCACCAGAAGAAGGCATCAGATCTCATTACGGATGG  999
      |||||||||||||||||||||||| | ||||||||||||||||| |||||
seq2  AGCTGTCTTCAGATGCACCAGAAG-ATGCATCAGATCTCATTAC-GATGG  998

seq1  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATGACC-TTCAAAA  1048
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATGACCTTTCAAAA  1048

seq1  GAGCAGCCGGTGCTCTTAACCA-CTGAGCCATCTCTCCAGCCCTAGATGT  1097
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGCAGCCGGTGCTCTTAACCACCTGAGCCATCTCTCCAGCCCTAGATGT  1098

seq1  CATTTTTTTTTT--TTTTTTT  1116
      || |||||||||  |||||||
seq2  CAATTTTTTTTTAGTTTTTTT  1119