BAC Information

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BAC

Clone NameB6Ng01-148I09
Chromosome7 (Build37)
Map Location 122,617,405 - 122,782,577
singlet/doubletdoublet
Overlap geneSox6
Upstream genePde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967, LOC668472
Downstream geneLOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148I09.bB6Ng01-148I09.g
ACCDH945101DH945102
length1,091894
definitionDH945101|Mus musculus domesticus DNA, BAC clone: B6Ng01-148I09, 5' end.DH945102|Mus musculus domesticus DNA, BAC clone: B6Ng01-148I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,781,480 - 122,782,577)(122,617,405 - 122,618,303)
sequence
gaattcttcttgaagctttggtaagaatttgtatttgataataaaaaaaa
attaagagaggccagttccaaacattcactaatttaaaaatatgttaaag
ttattcacagtcagaaataataattagccccctgggcccactctgctact
tttgtagactccaggaaaaggataatttagaaattcaaataaagcctcgc
ctgacaaaatgaaacattctacacttaattttatcctcagtccaggagtt
ttctaaacagtatcttgcaatagtctgtgcaccaacccactttaacataa
agattattcttatgacattgatttctaaaaagtagccacatcatcttcta
tccctgtgaagcaatttaccacactgcctgtaatggctcaagctggtgtt
taaggaaagtgattgtgacggaaattaggcaagtagtatccaaatcaccc
cctaagaaagctcaatgcccacccaacacaggaggacagcaacagactca
agcccacgaaatatgcagaccctgcctcacttctgtcaggctgtacaact
ctgaccctgcccttccctgtcagtttccatgggcagaggatgtaaatctg
aagttgaggcatatttttgtccagataacagacagtgctctctgcctatt
ggaggacattttgttaagtcccagtggtccctgtccctctgccctgtacc
cctctacccagctttcaaatgtggttctttattaaatatgtacccattcc
ccacatttgtcttacctttctgcttttagagagaactcaccctgctgccg
cctaaccacatccactagtatatgaaaggcagttttttcaggtatggtca
gtgcagttgagccctgcactcccttgtaaggtaattcttttgcatagtct
tcacccttactctatgagaaccccaaacaaaaccctgtacagagaggctt
aacccacttctcatacctgtctctgaccctgccacttgtgcatattgggt
atgaggtttcactcagccagtgcttctgttgcattactagcgttttatag
gtagaaccagacttatcaaagtctgattgtttgccgtgcca
gaattcatgaaccaaaaataaattctatttctatgttatatttacacaat
tagaaaactctaaaaatgagatggtgaagtcataaaaactttgcttaagc
cccactgatgtaagtgatctctgtgattgtcattctccattcccatggat
atttagagccaagtgtggctaataaatagaataaactgtgtatgcacaaa
atttagatttgaatacagcatcactgtctgagccaatgaaagaggcattc
atacccagtcattcccggacagcttttgcacttgagaatatggctagaag
ttactggcccccagtgctgaggccgagctggagctgacacagagcgttcc
tacacacatgtattttgcataaataaatgaaataacaagacgtaaaaatg
actcagatccggcaactgtgaggcaagcccacacgagtcgaaacaggtga
cttttgttcatgtagtttccataccagtttcacattagtcagtgataaaa
ataccatttatatccagtgcttgtaacacttacgaaacgacatctgtgag
tgtgtgggattttttttttctttttctttttcttactataagcaaaatca
agtttcaatcctaaagaacagtcctttgttctctactagcccagaatatt
attttggcatggtcataaaaacaaacaaaattaactactgtgctaaatgt
ttgccttgtgcaaaattaattacatacaatacaatgctagctatacaaca
ttctacctatgcagcacagttttcttttttaaaaaaagaacaaacaaaca
aaacgaaacaaacataccaatgggagcagaagccaaagacatgtggggaa
gcttgaggagaaactgaggagagagatccgaaaaatcagtaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_122781480_122782577
seq2: B6Ng01-148I09.b_47_1137 (reverse)

seq1  TGGCACGCAGAACAATCAGACTTTTGATAAGTCTGTTTCTACCTATAAAA  50
      |||||||   ||||||||||| ||||||||||||| ||||||||||||||
seq2  TGGCACGGCAAACAATCAGAC-TTTGATAAGTCTGGTTCTACCTATAAAA  49

seq1  CGCTAGTTAATGCAACAG-AGCACTGGGCTGAGTGAAACCTCATAACCAA  99
      |||||| ||||||||||| |||||| |||||||||||||||||| ||| |
seq2  CGCTAG-TAATGCAACAGAAGCACT-GGCTGAGTGAAACCTCAT-ACCCA  96

seq1  ATATGCACAAGTGGCAGGGTCAGAGAACAGGTACTGAGAAGTGGGTTAAG  149
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  ATATGCACAAGTGGCAGGGTCAGAG-ACAGGTA-TGAGAAGTGGGTTAAG  144

seq1  CCTCTTCTGTACAGGGTTTTGTTTGGGGTTTCTCATAGAGTAAGGGTGAA  199
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTC-TCTGTACAGGGTTTTGTTTGGGG-TTCTCATAGAGTAAGGGTGAA  192

seq1  GACTATGCAAAAGAATTACCTTACAAGGGAGTGCAGGGCTCAACTGCACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATGCAAAAGAATTACCTTACAAGGGAGTGCAGGGCTCAACTGCACT  242

seq1  GACCATACCTGAAAAAACTGCCTTTCATATACTAGTGGATGTGGTTAGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATACCTGAAAAAACTGCCTTTCATATACTAGTGGATGTGGTTAGGC  292

seq1  GGCAGCAGGGTGAGTTCTCTCTAAAAGCAGAAAGGTAAGACAAATGTGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGGGTGAGTTCTCTCTAAAAGCAGAAAGGTAAGACAAATGTGGG  342

seq1  GAATGGGTACATATTTAATAAAGAACCACATTTGAAAGCTGGGTAGAGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTACATATTTAATAAAGAACCACATTTGAAAGCTGGGTAGAGGG  392

seq1  GTACAGGGCAGAGGGACAGGGACCACTGGGACTTAACAAAATGTCCTCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGCAGAGGGACAGGGACCACTGGGACTTAACAAAATGTCCTCCA  442

seq1  ATAGGCAGAGAGCACTGTCTGTTATCTGGACAAAAATATGCCTCAACTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAGAGAGCACTGTCTGTTATCTGGACAAAAATATGCCTCAACTTC  492

seq1  AGATTTACATCCTCTGCCCATGGAAACTGACAGGGAAGGGCAGGGTCAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACATCCTCTGCCCATGGAAACTGACAGGGAAGGGCAGGGTCAGA  542

seq1  GTTGTACAGCCTGACAGAAGTGAGGCAGGGTCTGCATATTTCGTGGGCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTACAGCCTGACAGAAGTGAGGCAGGGTCTGCATATTTCGTGGGCTT  592

seq1  GAGTCTGTTGCTGTCCTCCTGTGTTGGGTGGGCATTGAGCTTTCTTAGGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGTTGCTGTCCTCCTGTGTTGGGTGGGCATTGAGCTTTCTTAGGG  642

seq1  GGTGATTTGGATACTACTTGCCTAATTTCCGTCACAATCACTTTCCTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTGGATACTACTTGCCTAATTTCCGTCACAATCACTTTCCTTAA  692

seq1  ACACCAGCTTGAGCCATTACAGGCAGTGTGGTAAATTGCTTCACAGGGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGCTTGAGCCATTACAGGCAGTGTGGTAAATTGCTTCACAGGGAT  742

seq1  AGAAGATGATGTGGCTACTTTTTAGAAATCAATGTCATAAGAATAATCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGATGTGGCTACTTTTTAGAAATCAATGTCATAAGAATAATCTT  792

seq1  TATGTTAAAGTGGGTTGGTGCACAGACTATTGCAAGATACTGTTTAGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAAAGTGGGTTGGTGCACAGACTATTGCAAGATACTGTTTAGAAA  842

seq1  ACTCCTGGACTGAGGATAAAATTAAGTGTAGAATGTTTCATTTTGTCAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGGACTGAGGATAAAATTAAGTGTAGAATGTTTCATTTTGTCAGG  892

seq1  CGAGGCTTTATTTGAATTTCTAAATTATCCTTTTCCTGGAGTCTACAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCTTTATTTGAATTTCTAAATTATCCTTTTCCTGGAGTCTACAAAA  942

seq1  GTAGCAGAGTGGGCCCAGGGGGCTAATTATTATTTCTGACTGTGAATAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGAGTGGGCCCAGGGGGCTAATTATTATTTCTGACTGTGAATAAC  992

seq1  TTTAACATATTTTTAAATTAGTGAATGTTTGGAACTGGCCTCTCTTAATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATATTTTTAAATTAGTGAATGTTTGGAACTGGCCTCTCTTAATT  1042

seq1  TTTTTTTATTATCAAATACAAATTCTTACCAAAGCTTCAAGAAGAATTC  1098
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTATCAAATACAAATTCTTACCAAAGCTTCAAGAAGAATTC  1091

seq1: chr7_122617405_122618303
seq2: B6Ng01-148I09.g_70_963

seq1  GAATTCATGAACCAAAAATAAATTCTATTTCTATGTTATATTTACACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAACCAAAAATAAATTCTATTTCTATGTTATATTTACACAAT  50

seq1  TAGAAAACTCTAAAAATGAGATGGTGAAGTCATAAAAACTTTGCTTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACTCTAAAAATGAGATGGTGAAGTCATAAAAACTTTGCTTAAGC  100

seq1  CCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCATTCCCATGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGATGTAAGTGATCTCTGTGATTGTCATTCTCCATTCCCATGGAT  150

seq1  ATTTAGAGCCAAGTGTGGCTAATAAATAGAATAAACTGTGTATGCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAGCCAAGTGTGGCTAATAAATAGAATAAACTGTGTATGCACAAA  200

seq1  ATTTAGATTTGAATACAGCATCACTGTCTGAGCCAATGAAAGAGGCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGATTTGAATACAGCATCACTGTCTGAGCCAATGAAAGAGGCATTC  250

seq1  ATACCCAGTCATTCCCGGACAGCTTTTGCACTTGAGAATATGGCTAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAGTCATTCCCGGACAGCTTTTGCACTTGAGAATATGGCTAGAAG  300

seq1  TTACTGGCCCCCAGTGCTGAGGCCGAGCTGGAGCTGACACAGAGCGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGCCCCCAGTGCTGAGGCCGAGCTGGAGCTGACACAGAGCGTTCC  350

seq1  TACACACATGTATTTTGCATAAATAAATGAAATAACAAGACGTAAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACATGTATTTTGCATAAATAAATGAAATAACAAGACGTAAAAATG  400

seq1  ACTCAGATCCGGCAACTGTGAGGCAAGCCCACACGAGTCGAAACAGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGATCCGGCAACTGTGAGGCAAGCCCACACGAGTCGAAACAGGTGA  450

seq1  CTTTTGTTCATGTAGTTTCCATACCAGTTTCACATTAGTCAGTGATAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTCATGTAGTTTCCATACCAGTTTCACATTAGTCAGTGATAAAA  500

seq1  ATACCATTTATATCCAGTGCTTGTAACACTTACGAAACGACATCTGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATTTATATCCAGTGCTTGTAACACTTACGAAACGACATCTGTGAG  550

seq1  TGTGTGGGATTTTTTTTTTCTTTTTCTTTTTCTTACTATAAGCAAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGGATTTTTTTTTTCTTTTTCTTTTTCTTACTATAAGCAAAATCA  600

seq1  AGTTTCAATCCTAAAGAACAGTCCTTTGTTCTCTACTAGCCCAGAATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAATCCTAAAGAACAGTCCTTTGTTCTCTACTAGCCCAGAATATT  650

seq1  ATTTTGGCATGGTCATAAAAACAAACAAAATTAACTACTGTGCTAAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCATGGTCATAAAAACAAACAAAATTAACTACTGTGCTAAATGT  700

seq1  TTGCCTTTGTGCAAAATTAATTACATACAATACAATGCTAGCTATACAAC  750
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCC-TTGTGCAAAATTAATTACATACAATACAATGCTAGCTATACAAC  749

seq1  ATTCTACCTATGCAGCACAGTTTTCTTTTTTAAAAAAAAGAACAAACAAA  800
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATTCTACCTATGCAGCACAGTTTTCTTTTTT-AAAAAAAGAACAAACAAA  798

seq1  CAAAAACAAAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATGTGG  850
      |||||    |||||||||||||||||||||||||||||||||||||||||
seq2  CAAAA--CGAAACAAACATACCAATGGGAGCAGAAGCCAAAGACATGTGG  846

seq1  GGAAGCATGAGGAGAAACTGAGGAAGAGAGATCCGAGAAATCAGTAAGA  899
      |||||| |||||||||||||||| |||||||||||| ||||||||||||
seq2  GGAAGCTTGAGGAGAAACTGAGG-AGAGAGATCCGAAAAATCAGTAAGA  894