BAC Information

Click to search

BAC

Clone NameB6Ng01-148I15
Chromosome7 (Build37)
Map Location 144,211,794 - 144,235,992
singlet/doubletdoublet
Overlap geneMgmt
Upstream geneLOC546009, EG621677, EG668771
Downstream geneEG621804, Ebf3, 9430038I01Rik, Txnl2, LOC435235
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148I15.bB6Ng01-148I15.g
ACCDH945111DH945112
length1,2421,169
definitionDH945111|Mus musculus domesticus DNA, BAC clone: B6Ng01-148I15, 5' end.DH945112|Mus musculus domesticus DNA, BAC clone: B6Ng01-148I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,211,794 - 144,213,038)(144,234,804 - 144,235,992)
sequence
gaattccctttcaagtatggataaccaactttcaagacactgagagttaa
acatcttccttttaagagaaacccaggcccgtgtgttgagttctgtcaga
cggtgaaggacaaggagcacccagggaagatttgcttagcagcttcgttt
ccaaaaccagctgctccacgatcaagcaaggacgcagaagaaatgaaaac
tgccacaagtgctgtatgagcctgggtgagctctggcctgtcagttccac
ggtaaagaacatgccagaagtgcacccctgaatctgaacctcagaaggcc
agtgtggggccagcacttgctccacaagcacaaggacttgagttcaaatc
ccaagcactcaattaaagaagccaaacatggctgtgtgtatctgaacccc
tggcattaggttgtggggaggatacagaggcaagcagatctcaagagctc
gctggcaagccagcctggtttaaatggagagcttccagtttagcgagaga
gctagtctcagagaaataaggcaaaggtgaaggaagattccagatcccag
gctctcagtgtaggcatgaaggcataaacacccactcatttacatgcatg
caccaaacatgtaactcacagaaaaatcacacacacacacacgtgtcatt
ctccatgtttgcagaataagaggtaaatctgttattatctcatacatgtg
cacagtgacactcattagaaaacaccccattccagtagttaacaggtaga
aggcagtcacacaggagtgatcttcagaaactccctctgtgcggtgatcg
atcgcagacatgtgcctgtggcctaagtgaacacgtgtattcttccctcc
atctctcctccagtattaatcaaagcaactgtcctttatcagacctgcgg
catggtttcctgggaaaggtattcctagtcctttctccaaatcctttcaa
agtgtgaggtttgcagtcagttcaaatcattgcccattttttctgtccta
actgatttctcaccacaaccacatccctttctccaactccaagttatgcc
tgaagcttgctatgctggtaccaggatgttagcaggaattcttagttcaa
gggagaactctgtgctacatgcagacaatacactactgtgggtgaagcta
gatagcctgccaccttgccttaaccggcctagtgttctgagcactaaaga
gatcctctcccgcttttgcgcttctagatttggtttagaaag
gaattcacacacagcagggtaattcctttcgtttgatgggtgaattttgc
ctttaatcaagctatgttttaaacaagaaacatctggggacacaatccaa
aggaatgggggatgaaagtccttcctgatttaaatgcctattggaatcct
atgtgtgatgattttccccatatcagccctgatgcgaattagctcctgat
atcattcagcctgagaagatgcaaggtggacagctctgccaggctgaatg
cagggatgggcatcgctggtctaaagatggctattttgttcaccatagtt
aaaaccaatatgttttactctgccacagaacaattctataaaatgctttg
gtgggggctaggtttttgtagagtcatatgacttctaattcactcatatg
agttcttcctttaacttactgaccaccagagatcaccatgatgctaatta
atgtggagaaaacgcaaatgcaaagagccaatgctgtaggtttctgaggc
acgagcagctgggggcaggtgggctctggtggcataactacccttaggct
gaggtacacatggcccaggatcctaggatatgtgtgcagtgttgtggagt
ccagcctcggggaggggctgaggaatctctgccagcaaagccatccaagc
agtgctcagagaagagaacacagtgccaggcagagaggggcactgaggag
tcaggcaggaagagatagggtgcacatatgggtttggggatccttgagtt
ctagctatcgttattaggtcttggtactgtcccctccacagcagaggaca
catgggactagaggctatcatcaactgcaatgtcagaggaggtcctggtc
aggacctagaagaggacatgacaaggcaggggctcctagcaggagcaagc
tctccagacacttacacaaaccattttctgctctgttcccaggcgcacgc
aaagtcgatgctcttttactagctacatcaaatgaatctcacaacgcaag
cttcggggatctagatctttctcagcatgctatgttgtagaaggctggtt
tttaaaaaagtttaaatatttattattatttttattagatatttcttaat
aacattcaaggcatacggaagtcccatatccccctcggcctgctccatac
catccactcctgcttcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144211794_144213038
seq2: B6Ng01-148I15.b_36_1277

seq1  GAATTCCCTTTCAAGTATGGATAACCAACTTTCAAGACACTGAGAGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTTCAAGTATGGATAACCAACTTTCAAGACACTGAGAGTTAA  50

seq1  ACATCTTCCTTTTAAGAGAAACCCAGGCCCGTGTGTTGAGTTCTGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTCCTTTTAAGAGAAACCCAGGCCCGTGTGTTGAGTTCTGTCAGA  100

seq1  CGGTGAAGGACAAGGAGCACCCAGGGAAGATTTGCTTAGCAGCTTCGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAAGGACAAGGAGCACCCAGGGAAGATTTGCTTAGCAGCTTCGTTT  150

seq1  CCAAAACCAGCTGCTCCACGATCAAGCAAGGACGCAGAAGAAATGAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACCAGCTGCTCCACGATCAAGCAAGGACGCAGAAGAAATGAAAAC  200

seq1  TGCCACAAGTGCTGTATGAGCCTGGGTGAGCTCTGGCCTGTCAGTTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAGTGCTGTATGAGCCTGGGTGAGCTCTGGCCTGTCAGTTCCAC  250

seq1  GGTAAAGAACATGCCAGAAGTGCACCCCTGAATCTGAACCTCAGAAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAACATGCCAGAAGTGCACCCCTGAATCTGAACCTCAGAAGGCC  300

seq1  AGTGTGGGGCCAGCACTTGCTCCACAAGCACAAGGACTTGAGTTCAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGGGCCAGCACTTGCTCCACAAGCACAAGGACTTGAGTTCAAATC  350

seq1  CCAAGCACTCAATTAAAGAAGCCAAACATGGCTGTGTGTATCTGAACCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCACTCAATTAAAGAAGCCAAACATGGCTGTGTGTATCTGAACCCC  400

seq1  TGGCATTAGGTTGTGGGGAGGATACAGAGGCAAGCAGATCTCAAGAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTAGGTTGTGGGGAGGATACAGAGGCAAGCAGATCTCAAGAGCTC  450

seq1  GCTGGCAAGCCAGCCTGGTTTAAATGGAGAGCTTCCAGTTTAGCGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAGCCAGCCTGGTTTAAATGGAGAGCTTCCAGTTTAGCGAGAGA  500

seq1  GCTAGTCTCAGAGAAATAAGGCAAAGGTGAAGGAAGATTCCAGATCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCTCAGAGAAATAAGGCAAAGGTGAAGGAAGATTCCAGATCCCAG  550

seq1  GCTCTCAGTGTAGGCATGAAGGCATAAACACCCACTCATTTACATGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCAGTGTAGGCATGAAGGCATAAACACCCACTCATTTACATGCATG  600

seq1  CACCAAACATGTAACTCACAGAAAAATCACACACACACACACGTGTCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAACATGTAACTCACAGAAAAATCACACACACACACACGTGTCATT  650

seq1  CTCCATGTTTGCAGAATAAGAGGTAAATCTGTTATTATCTCATACATGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTTTGCAGAATAAGAGGTAAATCTGTTATTATCTCATACATGTG  700

seq1  CACAGTGACACTCATTAGAAAACACCCCATTCCAGTAGTTAACAGGTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGACACTCATTAGAAAACACCCCATTCCAGTAGTTAACAGGTAGA  750

seq1  AGGCAGTCACACAGGAGTGATCTTCAGAAACTCCCTCTGTGCGGTGATCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGTCACACAGGAGTGATCTTCAGAAACTCCCTCTGTGCGGTGATCG  800

seq1  ATCGCAGACATGTGCCTGTGGCCTAAGTGAACACGTGTATTCTTCCCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCAGACATGTGCCTGTGGCCTAAGTGAACACGTGTATTCTTCCCTCC  850

seq1  ATCTCTCCTCCAGTATTAATCAAAGCAACTGTCCTATATCAGACCTGCGG  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATCTCTCCTCCAGTATTAATCAAAGCAACTGTCCTTTATCAGACCTGCGG  900

seq1  CATGGTTTCCTGGGAAAGGTTATTCCTAGTCCTTTCTCCAAATCCTTCCA  950
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  CATGGTTTCCTGGGAAAGG-TATTCCTAGTCCTTTCTCCAAATCCTTTCA  949

seq1  AAGTTGTGAGGTTTGCAGTCAGTTCAGATCATTGCCCA-TCTTTCTGTCC  999
      ||| |||||||||||||||||||||| ||||||||||| | |||||||||
seq2  AAG-TGTGAGGTTTGCAGTCAGTTCAAATCATTGCCCATTTTTTCTGTCC  998

seq1  TAACTGATATCTCACCACACCAACATCCCTTTCCTCCCAACTCCCAGGTA  1049
      |||||||| |||||||||| | |||||||||||   |||||||| || ||
seq2  TAACTGATTTCTCACCACAACCACATCCCTTTC--TCCAACTCCAAGTTA  1046

seq1  TGCCTGAAGCTTGCTATGCTGGTACCAGGATG-TAGCAGGAATCCTTTGG  1098
      |||||||||||||||||||||||||||||||| |||||||||| ||| | 
seq2  TGCCTGAAGCTTGCTATGCTGGTACCAGGATGTTAGCAGGAATTCTTAGT  1096

seq1  TCAAGGGGAGACTCTGTGCTACATGCCAGACAATAGCAACTACTTGTGGT  1148
      |||||||   ||||||||||||||| |||||||||   ||||| ||||| 
seq2  TCAAGGGAGAACTCTGTGCTACATG-CAGACAATA--CACTAC-TGTGGG  1142

seq1  GGAAGCTAGATAGCCTGCCACCCTGCCTTATCTGGGCCTAGGTGTTCTGA  1198
       ||||||||||||||||||||| ||||||| |  |||||| |||||||||
seq2  TGAAGCTAGATAGCCTGCCACCTTGCCTTAAC-CGGCCTA-GTGTTCTGA  1190

seq1  GCA-TAAAG-GATGCCTCCCCAGCTTTT--GCTTCTA-AGTTGG-TTAGA  1242
      ||| ||||| ||| |||| || ||||||  ||||||| | |||| |||||
seq2  GCACTAAAGAGAT-CCTCTCCCGCTTTTGCGCTTCTAGATTTGGTTTAGA  1239

seq1  AAG  1245
      |||
seq2  AAG  1242

seq1: chr7_144234804_144235992
seq2: B6Ng01-148I15.g_65_1233 (reverse)

seq1  CAAGAAGCAGGAGTGGATGGGTAGGGGAGCAGGGCGGAGGGGGGGTATAG  50
      |||||||||||||||||| ||||  |||||| ||| |||||||   ||| 
seq2  CAAGAAGCAGGAGTGGAT-GGTA-TGGAGCA-GGCCGAGGGGG---ATAT  44

seq1  GGAACTTTCCGGATAGCATTTGAAATGTATATAAAGAAAATATCTAATAA  100
      || || ||||| || || ||   ||||| ||| ||| ||||||||||| |
seq2  GGGAC-TTCCGTAT-GCCTT--GAATGT-TATTAAG-AAATATCTAAT-A  87

seq1  AAAATAAATAAATAAATAATTTAAAAATTTTTTTAAAAACCAGCCTTCTA  150
      |||||||   |||||||| ||   ||| ||||||||||||||||||||||
seq2  AAAATAA--TAATAAATATTT---AAACTTTTTTAAAAACCAGCCTTCTA  132

seq1  C-ACATAGCATGCTGAGAAAGATCTAGATCCCCGAAGCCTGCGTTTGTGG  199
      | |||||||||||||||||||||||||||||||||||| |||| |||| |
seq2  CAACATAGCATGCTGAGAAAGATCTAGATCCCCGAAGCTTGCG-TTGT-G  180

seq1  AGATTCATTTGATGTAAGCTAGTAAAAGAGCATCGACCTTTGCGTGCGCC  249
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  AGATTCATTTGATGT-AGCTAGTAAAAGAGCATCGA-CTTTGCGTGCGCC  228

seq1  TGGGAACAGAGCAG-AAATGGTTTGTGTAAGTGTCTGGAGAGCTTGCTCC  298
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  TGGGAACAGAGCAGAAAATGGTTTGTGTAAGTGTCTGGAGAGCTTGCT-C  277

seq1  CTGCTAGGAGCCCCTGCC-TGTCATGTCCTCTTCTAGGTCCTGACCAGGA  347
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGCTAGGAGCCCCTGCCTTGTCATGTCCTCTTCTAGGTCCTGACCAGGA  327

seq1  CCTCCTCTGACATTGCAGTTGATGATAGCCTCTAGTCCCATGTGTCCTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTGACATTGCAGTTGATGATAGCCTCTAGTCCCATGTGTCCTCT  377

seq1  GCTGTGGAGGGGACAGTACCAAGACCTAATAACGATAGCTAGAACTCAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGAGGGGACAGTACCAAGACCTAATAACGATAGCTAGAACTCAAG  427

seq1  GATCCCCAAACCCATATGTGCACCCTATCTCTTCCTGCCTGACTCCTCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCAAACCCATATGTGCACCCTATCTCTTCCTGCCTGACTCCTCAG  477

seq1  TGCCCCTCTCTGCCTGGCACTGTGTTCTCTTCTCTGAGCACTGCTTGGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCTCTCTGCCTGGCACTGTGTTCTCTTCTCTGAGCACTGCTTGGAT  527

seq1  GGCTTTGCTGGCAGAGATTCCTCAGCCCCTCCCCGAGGCTGGACTCCACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGCTGGCAGAGATTCCTCAGCCCCTCCCCGAGGCTGGACTCCACA  577

seq1  ACACTGCACACATATCCTAGGATCCTGGGCCATGTGTACCTCAGCCTAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCACACATATCCTAGGATCCTGGGCCATGTGTACCTCAGCCTAAG  627

seq1  GGTAGTTATGCCACCAGAGCCCACCTGCCCCCAGCTGCTCGTGCCTCAGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTATGCCACCAGAGCCCACCTGCCCCCAGCTGCTCGTGCCTCAGA  677

seq1  AACCTACAGCATTGGCTCTTTGCATTTGCGTTTTCTCCACATTAATTAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACAGCATTGGCTCTTTGCATTTGCGTTTTCTCCACATTAATTAGC  727

seq1  ATCATGGTGATCTCTGGTGGTCAGTAAGTTAAAGGAAGAACTCATATGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGTGATCTCTGGTGGTCAGTAAGTTAAAGGAAGAACTCATATGAG  777

seq1  TGAATTAGAAGTCATATGACTCTACAAAAACCTAGCCCCCACCAAAGCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGAAGTCATATGACTCTACAAAAACCTAGCCCCCACCAAAGCAT  827

seq1  TTTATAGAATTGTTCTGTGGCAGAGTAAAACATATTGGTTTTAACTATGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGAATTGTTCTGTGGCAGAGTAAAACATATTGGTTTTAACTATGG  877

seq1  TGAACAAAATAGCCATCTTTAGACCAGCGATGCCCATCCCTGCATTCAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAAATAGCCATCTTTAGACCAGCGATGCCCATCCCTGCATTCAGC  927

seq1  CTGGCAGAGCTGTCCACCTTGCATCTTCTCAGGCTGAATGATATCAGGAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGCTGTCCACCTTGCATCTTCTCAGGCTGAATGATATCAGGAG  977

seq1  CTAATTCGCATCAGGGCTGATATGGGGAAAATCATCACACATAGGATTCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCGCATCAGGGCTGATATGGGGAAAATCATCACACATAGGATTCC  1027

seq1  AATAGGCATTTAAATCAGGAAGGACTTTCATCCCCCATTCCTTTGGATTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGCATTTAAATCAGGAAGGACTTTCATCCCCCATTCCTTTGGATTG  1077

seq1  TGTCCCCAGATGTTTCTTGTTTAAAACATAGCTTGATTAAAGGCAAAATT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGATGTTTCTTGTTTAAAACATAGCTTGATTAAAGGCAAAATT  1127

seq1  CACCCATCAAACGAAAGGAATTACCCTGCTGTGTGTGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCAAACGAAAGGAATTACCCTGCTGTGTGTGAATTC  1169