BAC Information

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BAC

Clone NameB6Ng01-148K24
Chromosome7 (Build37)
Map Location 90,168,618 - 90,325,129
singlet/doubletdoublet
Overlap geneA530021J07Rik
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148K24.bB6Ng01-148K24.g
ACCDH945225DH945226
length1,0371,064
definitionDH945225|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K24, 5' end.DH945226|Mus musculus domesticus DNA, BAC clone: B6Ng01-148K24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,168,618 - 90,169,256)(90,324,077 - 90,325,129)
sequence
gaattctatgatagagtctatgtttgtttttaataggatgaaactgagct
tcagggttaatttgggagataaaatgttgtatttataaagattctttttc
tctgagatcatgcagtgaagatttgtagttctcacataaattgtattaat
tacctttcttgattacatttcataaagaagaaatttaaaggagaaagatt
tttttctggctcagaattaaaggagaatcattcagtcatgatggaggaga
caggatcataggcagagaaatcacagccgcaggaggctaaccagccacag
tgtgcctgcacttaatgagtagagtaaagaagtgggactgagctataaaa
actcaagtcctgcccacactgacccactttctcaagcaagcccctatacc
ttccacaggttccagaactttcccaagcaacaataccaactggagaccaa
atattcaaatacacgagagtaggagggatagatagttcatgttcaaatca
caacattgtatttctggttcctatacatccatggctatttcatgatgtag
aatatgtccattccaatttaaaagttcctctgatcattaacaaggctgac
attgttcaaagtccaaagtctttttaagaccctaggcaatgtctgcactt
tgagctcctattagataagaaatgaatgacgtgcttccaatatagagtga
cacagagtatacatttccattgtgagagagaggaatggggacatagcagg
gaaatcttagaccaaagcaagactgaaactaatagagaaaacaccagctc
tcaaagctcgctttataactaccattcagggctagtaatggtctcaaaga
gacttggggtaacaccattcatccaacttttgctgtctcttagactggct
tcattccatgcctttatctttccttgttgggaccccacagtcctggcttc
tatttgaaacttaaacttcctcttcacagcttccactcagtggcctccca
gcctcctctgcattgacttcacactgccaccattttt
gaattcattgctccttgatacactgaaaacgcaagcagtttcttatacct
ttaggttccttaacaaccaaagagcaattattcacattaaattttctcgg
tgaaaattcgctggtgggtttgttatgtttgcagtggaacagcctgataa
gtgcatctgcagctaattctggaagcaaaaggagtgccacgggagaaaca
aaagaaagagctccaaagaggaagccagcaggctggtgacattgtaagga
gtggggcaacatggcagaaaaggaaaagctttggaagaagagagttccag
ggctttgtatgcacaacttccaggcttcctgacatgggaatgagaatgag
tgttccagggactggtgtcttggtaacagagcagtgatgtttgagtatga
taagggctcaggcaaggaaactggcctgaaagagaatggccataagtaga
aagatgagcaacggtgtcaacgtggctttagggagcatgaagggtaaatg
catcccctttctgcaaaagcaaaggcagctggcagggggaaagaccatcc
cctgagtcacctaaagggggctaaccaggaaaggcttcagtgtgaattga
aggccccctataatggttcagagcccagaaagaggagggggcacatgatg
gctattcttggttgtcaacttgactatgtctggaagtaactaaaactcac
aaatggctgggcacctgagagggactttgaggtggaaagacacgtcttta
atccagaccttttaaggagggaagttccaccttttatctgagccacacct
tctgctaagcataaatacataaaatcaaggaagggggaaactcacactgc
ctatttgctctcactttccctggcaagtttatttctttactggcatttag
agcctacttatttggtattccagagtatactgaagaccagcttgagatag
ccagttcttgtgactgaacaactacctggattcttggaacttcccttggt
tagacgcatttattagaactggctggaaccaacggccttataagccggat
aaaatcctcctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90168618_90169256
seq2: B6Ng01-148K24.b_43_681

seq1  GAATTCTATGATAGAGTCTATGTTTGTTTTTAATAGGATGAAACTGAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGATAGAGTCTATGTTTGTTTTTAATAGGATGAAACTGAGCT  50

seq1  TCAGGGTTAATTTGGGAGATAAAATGTTGTATTTATAAAGATTCTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTTAATTTGGGAGATAAAATGTTGTATTTATAAAGATTCTTTTTC  100

seq1  TCTGAGATCATGCAGTGAAGATTTGTAGTTCTCACATAAATTGTATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATCATGCAGTGAAGATTTGTAGTTCTCACATAAATTGTATTAAT  150

seq1  TACCTTTCTTGATTACATTTCATAAAGAAGAAATTTAAAGGAGAAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTCTTGATTACATTTCATAAAGAAGAAATTTAAAGGAGAAAGATT  200

seq1  TTTTTCTGGCTCAGAATTAAAGGAGAATCATTCAGTCATGATGGAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGGCTCAGAATTAAAGGAGAATCATTCAGTCATGATGGAGGAGA  250

seq1  CAGGATCATAGGCAGAGAAATCACAGCCGCAGGAGGCTAACCAGCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCATAGGCAGAGAAATCACAGCCGCAGGAGGCTAACCAGCCACAG  300

seq1  TGTGCCTGCACTTAATGAGTAGAGTAAAGAAGTGGGACTGAGCTATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCACTTAATGAGTAGAGTAAAGAAGTGGGACTGAGCTATAAAA  350

seq1  ACTCAAGTCCTGCCCACACTGACCCACTTTCTCAAGCAAGCCCCTATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGTCCTGCCCACACTGACCCACTTTCTCAAGCAAGCCCCTATACC  400

seq1  TTCCACAGGTTCCAGAACTTTCCCAAGCAACAATACCAACTGGAGACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAGGTTCCAGAACTTTCCCAAGCAACAATACCAACTGGAGACCAA  450

seq1  ATATTCAAATACACGAGAGTAGGAGGGATAGATAGTTCATGTTCAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCAAATACACGAGAGTAGGAGGGATAGATAGTTCATGTTCAAATCA  500

seq1  CAACATTGTATTTCTGGTTCCTATACATCCATGGCTATTTCATGATGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGTATTTCTGGTTCCTATACATCCATGGCTATTTCATGATGTAG  550

seq1  AATATGTCCATTCCAATTTAAAAGTTCCTCTGATCATTAACAAGGCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTCCATTCCAATTTAAAAGTTCCTCTGATCATTAACAAGGCTGAC  600

seq1  ATTGTTCAAAGTCCAAAGTCTTTTTAAGACCCTAGGCAA  639
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCAAAGTCCAAAGTCTTTTTAAGACCCTAGGCAA  639

seq1: chr7_90324077_90325129
seq2: B6Ng01-148K24.g_68_1131 (reverse)

seq1  CACA-GAGGA-TTTAT-CGGCTTAT-AGGCTGT--GGTCCAGCCAG-TCT  43
      |||| ||||| ||||| |||||||| |||| ||  | ||||||||| |||
seq2  CACAGGAGGATTTTATCCGGCTTATAAGGCCGTTGGTTCCAGCCAGTTCT  50

seq1  AATAATGGCTGTCT-ACCAAGGGAAGTTCCAAGAATCCA-GTAGTTGTTC  91
      |||||  || |||| |||||||||||||||||||||||| ||||||||||
seq2  AATAAATGC-GTCTAACCAAGGGAAGTTCCAAGAATCCAGGTAGTTGTTC  99

seq1  AGTTCACAAG-ACTGGCTATCTC-AGCTGGTCTTCAGTATACTCTGGAAT  139
      || ||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  AG-TCACAAGAACTGGCTATCTCAAGCTGGTCTTCAGTATACTCTGGAAT  148

seq1  ACCAAATAAGTAGGCTCT-AATGCCAGTAAAGAAATAAACTTGCCAGGGA  188
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCAAATAAGTAGGCTCTAAATGCCAGTAAAGAAATAAACTTGCCAGGGA  198

seq1  AAGTGAGAGCAAATAGGCAGTGTGAGTTTCCCCCTTCCTTGATTTTATGT  238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGAGCAAATAGGCAGTGTGAGTTTCCCCCTTCCTTGATTTTATGT  248

seq1  ATTTATGC-TAGCAGAAGGTGTGGCTCAGATTAAAGGTGGAACTTCCCTC  287
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  ATTTATGCTTAGCAGAAGGTGTGGCTCAGATAAAAGGTGGAACTTCCCTC  298

seq1  CTTAAAAGGTCTGGATTAAAGACGTGTCTTTCCACCTCAAAGTCCCTCTC  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGGTCTGGATTAAAGACGTGTCTTTCCACCTCAAAGTCCCTCTC  348

seq1  AGGTGCCCAGCCATTTGTGAGTTTTAGTTACTTCCAGACATAGTCAAGTT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCCCAGCCATTTGTGAGTTTTAGTTACTTCCAGACATAGTCAAGTT  398

seq1  GACAACCAAGAATAGCCATCATGTGCCCCCTCCTCTTTCTGGGCTCTGAA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCAAGAATAGCCATCATGTGCCCCCTCCTCTTTCTGGGCTCTGAA  448

seq1  CCATTATAGGGGGCCTTCAATTCACACTGAAGCCTTTCCTGGTTAGCCCC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATAGGGGGCCTTCAATTCACACTGAAGCCTTTCCTGGTTAGCCCC  498

seq1  CTTTAGGTGACTCAGGGGATGGTCTTTCCCCCTGCCAGCTGCCTTTGCTT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGTGACTCAGGGGATGGTCTTTCCCCCTGCCAGCTGCCTTTGCTT  548

seq1  TTGCAGAAAGGGGATGCATTTACCCTTCATGCTCCCTAAAGCCACGTTGA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAAAGGGGATGCATTTACCCTTCATGCTCCCTAAAGCCACGTTGA  598

seq1  CACCGTTGCTCATCTTTCTACTTATGGCCATTCTCTTTCAGGCCAGTTTC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTTGCTCATCTTTCTACTTATGGCCATTCTCTTTCAGGCCAGTTTC  648

seq1  CTTGCCTGAGCCCTTATCATACTCAAACATCACTGCTCTGTTACCAAGAC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGAGCCCTTATCATACTCAAACATCACTGCTCTGTTACCAAGAC  698

seq1  ACCAGTCCCTGGAACACTCATTCTCATTCCCATGTCAGGAAGCCTGGAAG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTCCCTGGAACACTCATTCTCATTCCCATGTCAGGAAGCCTGGAAG  748

seq1  TTGTGCATACAAAGCCCTGGAACTCTCTTCTTCCAAAGCTTTTCCTTTTC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATACAAAGCCCTGGAACTCTCTTCTTCCAAAGCTTTTCCTTTTC  798

seq1  TGCCATGTTGCCCCACTCCTTACAATGTCACCAGCCTGCTGGCTTCCTCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTTGCCCCACTCCTTACAATGTCACCAGCCTGCTGGCTTCCTCT  848

seq1  TTGGAGCTCTTTCTTTTGTTTCTCCCGTGGCACTCCTTTTGCTTCCAGAA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTCTTTCTTTTGTTTCTCCCGTGGCACTCCTTTTGCTTCCAGAA  898

seq1  TTAGCTGCAGATGCACTTATCAGGCTGTTCCACTGCAAACATAACAAACC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGCAGATGCACTTATCAGGCTGTTCCACTGCAAACATAACAAACC  948

seq1  CACCAGCGAATTTTCACCGAGAAAATTTAATGTGAATAATTGCTCTTTGG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCGAATTTTCACCGAGAAAATTTAATGTGAATAATTGCTCTTTGG  998

seq1  TTGTTAAGGAACCTAAAGGTATAAGAAACTGCTTGCGTTTTCAGTGTATC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGGAACCTAAAGGTATAAGAAACTGCTTGCGTTTTCAGTGTATC  1048

seq1  AAGGAGCAATGAATTC  1053
      ||||||||||||||||
seq2  AAGGAGCAATGAATTC  1064