BAC Information

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BAC

Clone NameB6Ng01-148O12
Chromosome7 (Build37)
Map Location 15,337,526 - 15,338,071
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352
Downstream geneEG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148O12.bB6Ng01-148O12.g
ACCDH945389DH945390
length6481,200
definitionDH945389|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O12, 5' end.DH945390|Mus musculus domesticus DNA, BAC clone: B6Ng01-148O12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtttagctctgagccccatcttttaagggggttatttgatt
ttgtggagtccaccctcttgagttctttatatatatattagtcccctatc
tgatttaagataggtaaagatcctttcccaatctgtttgtggcctttttg
tcttattgaaggtgtcttttgccttgcagaagctttgcagtttcatgagg
tcccatttgtcaatcctcgttcttacagcacaagccattgctgttgtatt
caggaatttttcccctgtgcccatatcttcgaggcttttatgtgagttat
tcagcagaaagactccaagatgacagttacatcaaaggaaataagagata
catttatatcctggtcattgtcgtagtggtcaaacacagagagggttgat
tcaagcaaggcataataacttcctggttatctggtgagtttgtcttgtga
ataatgtttgtgtatgatgtgtaggattggaggggttacattcatgaaag
agagaaggcccttgtggaggagatcctttggtagcattcaggagatggtt
tgtgtgtgtttggaggtagaggtttgtcaaaggcccagcttgatgggtgt
agggccttgagaaaattggagagaagttgcaagtttcaacatacaaaa
gaattctggacgaaattcaagacagtctatcagaggtaaagtggggagag
agagtaggagcaacgaggaaacatggtgcaccaattaagcatacaggcct
ttcctcgggtcttgaaaccgaggaaaagtttatgtcagggaagaatacct
ggggagagattagaaggaagaaggaaaaagaaaagaaaaaagatcaatca
gcgaaggtttctaggagaaggaacttatacccgccactagatgccagaat
gacagaggcagcagggaggatatttggagacccggaggcagctatgcctt
taattgaacaattggtttatgaacaagctatgcaggaatgcagatcagca
atcacacctagaaagagtaaggggttacagaactggttaaaggtttgctg
tgagcttggagggccgcttactaatgctggattggcagcagccattctgc
atgggaggagtcgctcagactcagcagagctcaaactttgctttaattgt
ggcaaaccaggacatttcaaaaaggactgcagagcccctataaaaaggac
ggctccaggattgtgtactaaatgtggaaagggatatcattgggctaagg
actgttgttcaattagagatatatacgagacaggctcttgcagcctacaa
ggtcttattgtccaccctggagttgtagatcaggattataaaggggaact
tcaggttctctgttctcgtcctcaaggtgtcttttctatatcacaagggg
acagaatagctcaactaataattttgccaagcctacatggctgttttcct
tcctctggaattcctcgagctgccagagggattggttctactggaaatga
ttctgcttacttaataatgcctttagattccagggcatccttggagtagt
atagatggaaacatttgaggtattttagatacaggagcacacaaagtata
ttctctcactggtagccaaatcctgtcccgtaactcagtaatcacactct
ttaacaggctaggctatcagtctgttccacattaagctcccgtctttgag
ctggcaatgatgtacacatattactccttggcgagaatcaatccatgttg
cttctggccagcgatcctgtatcttgcagatgtgctgaaatcatgacctt
aagcttgagccgttctggattacctccacaggtagacatcgatcatcata

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15337526_15338071
seq2: B6Ng01-148O12.b_150_693 (reverse)

seq1  TTTGTATGTTGAAAACTTGCAAACTTCTCCTGTATTTTCTCAAGGCCCTA  50
      ||||||||||| |||||||| ||||||||    |||||||||||||||||
seq2  TTTGTATGTTG-AAACTTGC-AACTTCTCTCCAATTTTCTCAAGGCCCTA  48

seq1  CACCCATCAAGCTGGGCCTTTGACAAACCTCTACCTCCAAACACACACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCAAGCTGGGCCTTTGACAAACCTCTACCTCCAAACACACACAA  98

seq1  ACCATCTCCTGAATGCTACCAAAGGATCTCCTCCACAAGGGCCTTCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTCCTGAATGCTACCAAAGGATCTCCTCCACAAGGGCCTTCTCTC  148

seq1  TTTCATGAATGTAACCCCTCCAATCCTACACATCATACACAAACATTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAATGTAACCCCTCCAATCCTACACATCATACACAAACATTATT  198

seq1  CACAAGACAAACTCACCAGATAACCAGGAAGTTATTATGCCTTGCTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGACAAACTCACCAGATAACCAGGAAGTTATTATGCCTTGCTTGAA  248

seq1  TCAACCCTCTCTGTGTTTGACCACTACGACAATGACCAGGATATAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTCTCTGTGTTTGACCACTACGACAATGACCAGGATATAAATGT  298

seq1  ATCTCTTATTTCCTTTGATGTAACTGTCATCTTGGAGTCTTTGTGCTGAA  350
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCTCTTATTTCCTTTGATGTAACTGTCATCTTGGAGTCTTTCTGCTGAA  348

seq1  TAACTCACATAAAAGCCTCGAAGATATGGGCTCAGGGGAAAAATTCCTGA  400
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAACTCACATAAAAGCCTCGAAGATATGGGCACAGGGGAAAAATTCCTGA  398

seq1  ATACAACAGCAATGTCTTGTGCTGTAAGAACGAGGATTGACAAATGGGAC  450
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATACAACAGCAATGGCTTGTGCTGTAAGAACGAGGATTGACAAATGGGAC  448

seq1  CTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCTTCAATAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCTTCAATAAGAC  498

seq1  AAAAAGGCCACAAACAGATTGGGAAAGGATCTTTACCTATCTTAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGCCACAAACAGATTGGGAAAGGATCTTTACCTATCTTAAA  544