BAC Information

Click to search

BAC

Clone NameB6Ng01-149H14
Chromosome7 (Build37)
Map Location 88,194,196 - 88,311,274
singlet/doubletdoublet
Overlap geneAlpk3, Slc28a1, EG623286
Upstream geneZfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592
Downstream geneLOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2, 2610204K14Rik, 3110040N11Rik, Btbd1, Tm6sf1, LOC100043161, Hdgfrp3, Bnc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149H14.bB6Ng01-149H14.g
ACCDH945803DH945804
length802207
definitionDH945803|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H14, 5' end.DH945804|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,310,473 - 88,311,274)(88,194,196 - 88,194,402)
sequence
gaattcttttctttaaacacattttctttaaatgtgctttgatgttatgc
ctgcatgtgcatacatatgaggatatcagagctctcggaactggagttat
agagttctgagctgtcatgtgggtgctggaaattgaacctaggttctcta
gaagagcaactagtgctttaaactgctgagccatctttccaaccctcttg
gtactctctaagtagccaagtatggtcctgaatttgtgatcctcctgcct
ctgctaactgaggattgggcttaacaatttgtgcagtgctggggatcaaa
cccagagctctgtgcatgccattcaaacattctgccaaatgggcttcatc
ttcagccctcaacatgccttcaaatacagacttccagtgcagctttattt
ctgggggtaactgtagtgaggcacactgaggcggcacttagcctctacta
tagcagttaggaaagttgctccaggagggcttggcatggagttgtgctta
accacacctcaggaagctcctgaagaaatgacccaggaagcagggaaagt
tctacactgagatattcacttcaacatcgtcatacacatagccagacaag
gagttcagctgatgatccaagagcacaatgctggaaaatatggtagacac
tctagtttgggcctgtgagatagctcagcaggtgaaatgctgtcattatg
catgacattctaaggtcagtcaattcctacaaatcaccttctggcttcca
tacgtgtgatatgggagagagagaagagagagagagagagagagagagag
ag
tcatgctaggatttggctttaaaatgagaacaaagagaaagtagtcccag
tgagggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgttgacaataggatcctaaggactcattggctagtcagttttgcacagt
gagcttctgattcacttatagaccttatctcaaagattagtcatggtaaa
gcaaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_88310473_88311274
seq2: B6Ng01-149H14.b_47_848 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCCCATATCACACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCCCATATCACACG  50

seq1  TATGGAAGCCAGAAGGTGATTTGTAGGAATTGACTGACCTTAGAATGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGCCAGAAGGTGATTTGTAGGAATTGACTGACCTTAGAATGTCA  100

seq1  TGCATAATGACAGCATTTCACCTGCTGAGCTATCTCACAGGCCCAAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATGACAGCATTTCACCTGCTGAGCTATCTCACAGGCCCAAACTA  150

seq1  GAGTGTCTACCATATTTTCCAGCATTGTGCTCTTGGATCATCAGCTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTACCATATTTTCCAGCATTGTGCTCTTGGATCATCAGCTGAAC  200

seq1  TCCTTGTCTGGCTATGTGTATGACGATGTTGAAGTGAATATCTCAGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTCTGGCTATGTGTATGACGATGTTGAAGTGAATATCTCAGTGTA  250

seq1  GAACTTTCCCTGCTTCCTGGGTCATTTCTTCAGGAGCTTCCTGAGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTCCCTGCTTCCTGGGTCATTTCTTCAGGAGCTTCCTGAGGTGTG  300

seq1  GTTAAGCACAACTCCATGCCAAGCCCTCCTGGAGCAACTTTCCTAACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCACAACTCCATGCCAAGCCCTCCTGGAGCAACTTTCCTAACTGC  350

seq1  TATAGTAGAGGCTAAGTGCCGCCTCAGTGTGCCTCACTACAGTTACCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAGAGGCTAAGTGCCGCCTCAGTGTGCCTCACTACAGTTACCCCC  400

seq1  AGAAATAAAGCTGCACTGGAAGTCTGTATTTGAAGGCATGTTGAGGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAGCTGCACTGGAAGTCTGTATTTGAAGGCATGTTGAGGGCTG  450

seq1  AAGATGAAGCCCATTTGGCAGAATGTTTGAATGGCATGCACAGAGCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAGCCCATTTGGCAGAATGTTTGAATGGCATGCACAGAGCTCTG  500

seq1  GGTTTGATCCCCAGCACTGCACAAATTGTTAAGCCCAATCCTCAGTTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGATCCCCAGCACTGCACAAATTGTTAAGCCCAATCCTCAGTTAGC  550

seq1  AGAGGCAGGAGGATCACAAATTCAGGACCATACTTGGCTACTTAGAGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGAGGATCACAAATTCAGGACCATACTTGGCTACTTAGAGAGT  600

seq1  ACCAAGAGGGTTGGAAAGATGGCTCAGCAGTTTAAAGCACTAGTTGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGAGGGTTGGAAAGATGGCTCAGCAGTTTAAAGCACTAGTTGCTCT  650

seq1  TCTAGAGAACCTAGGTTCAATTTCCAGCACCCACATGACAGCTCAGAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGAACCTAGGTTCAATTTCCAGCACCCACATGACAGCTCAGAACT  700

seq1  CTATAACTCCAGTTCCGAGAGCTCTGATATCCTCATATGTATGCACATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACTCCAGTTCCGAGAGCTCTGATATCCTCATATGTATGCACATGC  750

seq1  AGGCATAACATCAAAGCACATTTAAAGAAAATGTGTTTAAAGAAAAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAACATCAAAGCACATTTAAAGAAAATGTGTTTAAAGAAAAGAAT  800

seq1  TC  802
      ||
seq2  TC  802

seq1: chr7_88194196_88194402
seq2: B6Ng01-149H14.g_74_280

seq1  TCATGCTAGGATTTGGCTTTAAAATGAGAACAAAGAGAAAGTAGTCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTAGGATTTGGCTTTAAAATGAGAACAAAGAGAAAGTAGTCCCAG  50

seq1  TGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100

seq1  TGTTGACAAGAGGATCCTAAGGACTCATTGGCCAGTCAGTTTAGCACAGT  150
      ||||||||| |||||||||||||||||||||| ||||||||| |||||||
seq2  TGTTGACAATAGGATCCTAAGGACTCATTGGCTAGTCAGTTTTGCACAGT  150

seq1  GAGCTTCTGATTCACTAAGAGACCTTAGCTCAAAGAGTAGTCATGGAAAA  200
      |||||||||||||||| | |||||||| |||||||| ||||||||| |||
seq2  GAGCTTCTGATTCACTTATAGACCTTATCTCAAAGATTAGTCATGGTAAA  200

seq1  GCAACCC  207
      |||||||
seq2  GCAACCC  207