BAC Information

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BAC

Clone NameB6Ng01-149K21
Chromosome16 (Build37)7 (Build37)
Map Location 62,657,973 - 62,659,06790,441,720 - 90,441,861
singlet/doubletsingletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1, Epha3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149K21.bB6Ng01-149K21.g
ACCDH945951DH945952
length1,093688
definitionDH945951|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K21, 5' end.DH945952|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(62,657,973 - 62,659,067)(90,441,720 - 90,441,861)
sequence
gaattctttcagaacaaaggtgtaaacctttcccatctcataccccatgg
cacatggcaagggcactgcatccaaaaggctctcagaatacttgctgtgt
gtagtatatgaactgacaagaatagaacaaagaaaatagtgctcagatgt
cctttcctacctatgtggcttgaaagaaacaggaaggcatgaactcaatg
ttatctgtatatttacttacacacttaatgtaagagaaagaattgaacta
aattataatttagataaattgctaacagtcagttggtacttctagggaag
aaagaaagactgctttctccagatagaattttgaccataacatcacagaa
aggagacaagagcaaccaccaagggtgttacagaaatcagaggccctacc
tattctgtgtcttttgaagaaggaaaaatagccagagcaaaaatgtattt
catccatacatggggaaaataattcctaattaaatagttttatagctgca
ctaagttaaacgatgtataaagtgttgaactctcctgtctgtgaaagcat
ttaaatcagtactgtttctaaccatacaagcacagattagaaaaatacag
gtaaattataaagataatctacccttgcacatagaaattgtgagacaacc
ttctgctaaaaaacttggctattcatgtgagtttttccttcttcctttgc
cacccaggatgttttattcaaatgtgtgtacaagtagagagataaggtgt
aagggagagaaaagaggaaaacttcttaactcttgatatttgccttttgc
tttgaaaatgtatttctgtcaatattcaaaagttggaaggaaatgagata
gatgtatattttaaaagaagtgactttggaaaaatggggtagaggaacgg
gctttcgtaggttttactgcatttatgtgctctctgtttgctttaagaga
tactgtatttcttcccatgccattttctttacaggggaaggtgattgagc
tgtttcattaaatttgaatatgaagactgatttcaacgaagcattgcaca
ggaaagaaggaaaggaaaaatctctctcatggacgatataatt
gaattcaagacccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacaccaaagtagatggtgagaagctggaagcaatccaaataaa
atcagggactagacaaggctgcccactttctccctacctcttcaacatag
tacttgaagtcctagccacagcaattcgacaacaaaaggagatccagggg
atacaaattggcaaagaagaagtcaaaatatcactttttgcagatgatat
gatagcatatataagtgaccctaaaaattccaccagagaacacctaaacc
tgataaacagcttcagtgaagtagctggttataaaattaactcaaacatg
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaataacacacttcccaatagccacaaataatataaaaaacttggcat
gactctaactaaggagtgaaagatctgtatgataagaacttcattcttga
aaaaagaaataaagaagtttaaaaatggaagtccccatgtctggttgcag
acattgtaaaatgctacttgcaaacattaagatgatgatcccctaatcca
ccatcttatgttagaagcatggattccggatacaaactaggagaaccttt
ggaaaagactgggatttgcacaactcttcaaaatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62657973_62659067
seq2: B6Ng01-149K21.b_47_1139 (reverse)

seq1  AATTATATAGTCCATGAGAGAGA-TTTTCCTTTCCTTCTTTCCTGTGCAA  49
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  AATTATATCGTCCATGAGAGAGATTTTTCCTTTCCTTCTTTCCTGTGCAA  50

seq1  TGCTTCGTTGAAATCAGTCTTCATATTCAAATTTAATTGAAACAGCTCCA  99
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  TGCTTCGTTGAAATCAGTCTTCATATTCAAATTTAA-TGAAACAGCT-CA  98

seq1  ATCACCTTCCCCTGTAAAGAAAATGGCATGGGAAGAAATACAGTATCTCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATCACCTTCCCCTGTAAAGAAAATGGCATGGGAAGAAATACAGTATCTCT  148

seq1  TAAAGCAAACAGAGAGCACATAAATGCAGTAAAACCTAACGAAAGCCCGT  199
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAAAGCAAACAGAGAGCACATAAATGCAGTAAAACCT-ACGAAAGCCCGT  197

seq1  TCCTCTACCCCATTTTTCCAAAGTCACTTCTTTTAAAATATACATCTATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTACCCCATTTTTCCAAAGTCACTTCTTTTAAAATATACATCTATC  247

seq1  TCATTTCCTTCCAACTTTTGAATATTGACAGAAATACATTTTCAAAGCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCTTCCAACTTTTGAATATTGACAGAAATACATTTTCAAAGCAA  297

seq1  AAGGCAAATATCAAGAGTTAAGAAGTTTTCCTCTTTTCTCTCCCTTACAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATATCAAGAGTTAAGAAGTTTTCCTCTTTTCTCTCCCTTACAC  347

seq1  CTTATCTCTCTACTTGTACACACATTTGAATAAAACATCCTGGGTGGCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTCTCTACTTGTACACACATTTGAATAAAACATCCTGGGTGGCAA  397

seq1  AGGAAGAAGGAAAAACTCACATGAATAGCCAAGTTTTTTAGCAGAAGGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGGAAAAACTCACATGAATAGCCAAGTTTTTTAGCAGAAGGTT  447

seq1  GTCTCACAATTTCTATGTGCAAGGGTAGATTATCTTTATAATTTACCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACAATTTCTATGTGCAAGGGTAGATTATCTTTATAATTTACCTGT  497

seq1  ATTTTTCTAATCTGTGCTTGTATGGTTAGAAACAGTACTGATTTAAATGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTAATCTGTGCTTGTATGGTTAGAAACAGTACTGATTTAAATGC  547

seq1  TTTCACAGACAGGAGAGTTCAACACTTTATACATCGTTTAACTTAGTGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGACAGGAGAGTTCAACACTTTATACATCGTTTAACTTAGTGCA  597

seq1  GCTATAAAACTATTTAATTAGGAATTATTTTCCCCATGTATGGATGAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAAAACTATTTAATTAGGAATTATTTTCCCCATGTATGGATGAAAT  647

seq1  ACATTTTTGCTCTGGCTATTTTTCCTTCTTCAAAAGACACAGAATAGGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTGCTCTGGCTATTTTTCCTTCTTCAAAAGACACAGAATAGGTA  697

seq1  GGGCCTCTGATTTCTGTAACACCCTTGGTGGTTGCTCTTGTCTCCTTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCTGATTTCTGTAACACCCTTGGTGGTTGCTCTTGTCTCCTTTCT  747

seq1  GTGATGTTATGGTCAAAATTCTATCTGGAGAAAGCAGTCTTTCTTTCTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTATGGTCAAAATTCTATCTGGAGAAAGCAGTCTTTCTTTCTTC  797

seq1  CCTAGAAGTACCAACTGACTGTTAGCAATTTATCTAAATTATAATTTAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGTACCAACTGACTGTTAGCAATTTATCTAAATTATAATTTAGT  847

seq1  TCAATTCTTTCTCTTACATTAAGTGTGTAAGTAAATATACAGATAACATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTTTCTCTTACATTAAGTGTGTAAGTAAATATACAGATAACATT  897

seq1  GAGTTCATGCCTTCCTGTTTCTTTCAAGCCACATAGGTAGGAAAGGACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCATGCCTTCCTGTTTCTTTCAAGCCACATAGGTAGGAAAGGACAT  947

seq1  CTGAGCACTATTTTCTTTGTTCTATTCTTGTCAGTTCATATACTACACAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCACTATTTTCTTTGTTCTATTCTTGTCAGTTCATATACTACACAC  997

seq1  AGCAAGTATTCTGAGAGCCTTTTGGATGCAGTGCCCTTGCCATGTGCCAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTATTCTGAGAGCCTTTTGGATGCAGTGCCCTTGCCATGTGCCAT  1047

seq1  GGGGTATGAGATGGGAAAGGTTTACACCTTTGTTCTGAAAGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTATGAGATGGGAAAGGTTTACACCTTTGTTCTGAAAGAATTC  1093

seq1: chr7_90441720_90441861
seq2: B6Ng01-149K21.g_241_756

seq1  AATTCGACACCAAAAGGAGAACAAGGGGATACAAATCAGAAAGGAAGAAG  50
      ||||||||| |||||||||| | |||||||||||||  | || |||||||
seq2  AATTCGACAACAAAAGGAGATCCAGGGGATACAAATTGGCAAAGAAGAAG  50

seq1  TCAAAATATCACTTTTTGCAGATGATATGATAG------TAAGT-ATTTT  93
      |||||||||||||||||||||||||||||||||      ||||| |   |
seq2  TCAAAATATCACTTTTTGCAGATGATATGATAGCATATATAAGTGACCCT  100

seq1  ACTAACT----GAGTCATCTCCTGTGCTTCATAATCAACTCTTCAAAATG  139
      |  || |     ||  | | |||   | | |||| ||   ||||  | ||
seq2  AAAAATTCCACCAGAGAACACCTAAACCTGATAAACA--GCTTC--AGTG  146

seq1  AAA-----------------------------------------------  142
      ||                                                
seq2  AAGTAGCTGGTTATAAAATTAACTCAAACATGTCAATGGCCTTTCTCTAC  196

seq1  --------------------------------------------------  142
                                                        
seq2  ACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAATAACACACTTCCC  246

seq1  --------------------------------------------------  142
                                                        
seq2  AATAGCCACAAATAATATAAAAAACTTGGCATGACTCTAACTAAGGAGTG  296

seq1  --------------------------------------------------  142
                                                        
seq2  AAAGATCTGTATGATAAGAACTTCATTCTTGAAAAAAGAAATAAAGAAGT  346

seq1  --------------------------------------------------  142
                                                        
seq2  TTAAAAATGGAAGTCCCCATGTCTGGTTGCAGACATTGTAAAATGCTACT  396

seq1  --------------------------------------------------  142
                                                        
seq2  TGCAAACATTAAGATGATGATCCCCTAATCCACCATCTTATGTTAGAAGC  446

seq1  --------------------------------------------------  142
                                                        
seq2  ATGGATTCCGGATACAAACTAGGAGAACCTTTGGAAAAGACTGGGATTTG  496

seq1  --------------------  142
                          
seq2  CACAACTCTTCAAAATGAAA  516