BAC Information

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BAC

Clone NameB6Ng01-149N12
Chromosome7 (Build37)
Map Location 85,852,034 - 86,017,645
singlet/doubletdoublet
Overlap geneMrpl46, Mrps11, Det1
Upstream geneA330068G13Rik, Ntrk3
Downstream geneIsg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149N12.bB6Ng01-149N12.g
ACCDH946073DH946074
length1,0301,014
definitionDH946073|Mus musculus domesticus DNA, BAC clone: B6Ng01-149N12, 5' end.DH946074|Mus musculus domesticus DNA, BAC clone: B6Ng01-149N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,016,623 - 86,017,645)(85,852,034 - 85,853,056)
sequence
gaattccccttactcaaaagcacacacactctgccatccgtgggtcaaga
cactgtgctctatggggaaatcttgtttgtcgttcccagcatcgattcgg
atcacgtaacccttcttcagccagagcatcaacagcagtttccgtggctg
tggcacaactcattgaaaacaccttaattacatcatccacttaaggagtt
ttggacaactggtggctaggaggaagatgtggcagggaaaaaaaaaaccc
tctacttccctcttctgatgatggctaacatatttgctttaggtactttc
aatttttatgtgtatgtgagtggaaaaaagcagggtttctctgtgtagcc
ctggctgtcctagaagttactagtagagcaggctggccttaaactcagag
atctgcctgcctctgcctcccgagtgctggggttaaaggtgtgcagcacc
accgccccaatgctccagatactttttttaaacataagaggaaagtatac
aagtattgatgcctccatcccatcttctctctttcttgtcagatgtgaat
gctatcctgagggtgagcccggtcttgctgtccatgttattaaacactta
ttgtattgacacttacctagaatagtctatgttaatattatgtgctgttt
gttttgtttgtttgtttacctatctacttatctgttttgtttatttattc
tgagacaagatatgaccgtgtttccacaactggcctaaaactgtcaaccc
ttctgtctctgcctccctagtgctaggaacagaggtgtgtgcctttcatg
cctggctttggccttacttttaatttaacattccagcttttggcttcctg
taacatggtatttctgaatgttcaagtccacttctaagacccaccagttc
attgattcacttcattgaacacctctagttcattgatccactctagtcct
ttgattacttctttgatcactcttgttttttacccctaatttggtgccta
aatagaattttaagttatttcagtgcttta
gaattccaaaacaacttggctgcagaatgagaccctgtctcaaaaaatcc
aaagagcatctgcagttttatccaaacatggctgactgcacacactccca
cagttattctccaaggctactttgtacaagagtggcagagccaaatcatt
gccacagagatcacatgacttgagagatttcaacattccttctctggtcc
ttggcataagggtacgtttgctgtccctgcgctctgccatacttctgttg
tctactgggaaacagttctttgatggtcccagcttccatagacggggatc
aggtaatacccatgttcctttgcccctccaacctttgtggtgttaatgtc
tccttgagagccttcccaaaataaagcacaagaatcagaagctgcagcct
ggtgggctgcaatgacttgcttaagagcatgcaactagaaaggagcatat
tcaagtgtcaagtccagaagttttgccctgtaagcttgacactctccctc
catattgtctcatattgcccatacatggaacccagagaacaccttagctt
tagggagctgggattccttcagtgatggaaaccccagaccagagatgact
tcccaggaatgttggttgcatggggtttatgagcagcatttgtctaacaa
agtaatttctgaacatctcacatcccttgtcacaatagcagaaggcatct
ccccgtgtatttgttttttcccagtgctggcacgacacgggagctcctgg
gcctgagaggcggagataaatatagctgttctttactctctagtcgggtt
gcctgcatccacaacaaatagacattgtcacctgacacacatcaaacctg
cacacatgctcacgaagcttgcatcacagacgtttccagattaccccaac
ctgggaaggggcacagtttctctaatatgatccaactggctgtgtggggg
ttactaggaggcagttgggtctgtcaaaagttttttttttcttctagtga
ggacaggatgaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86016623_86017645
seq2: B6Ng01-149N12.b_49_1078 (reverse)

seq1  TAAAGCACTGAAATAACTTAAAATTCTATTTAGGCAACAAAATAGGGGTA  50
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TAAAGCACTGAAATAACTTAAAATTCTATTTAGGCACCAAATTAGGGGTA  50

seq1  AAAAA-TAGAGTGATCAATG-AGTAATCAATGAACTAGAGT-GATCAATG  97
      |||||  ||||||||||| | ||||||||| | |||||||| ||||||||
seq2  AAAAACAAGAGTGATCAAAGAAGTAATCAAAGGACTAGAGTGGATCAATG  100

seq1  AACTAGA-GTGATCAATG-AGTG-ATCAATGAACT-GTGGGTCTTAGAAG  143
      ||||||| ||| |||||| |||| ||||||||||| ||||||||||||||
seq2  AACTAGAGGTGTTCAATGAAGTGAATCAATGAACTGGTGGGTCTTAGAAG  150

seq1  TGGACTTGAACATTCAAGAAATACCATGTTACAGGAAGCCAAAAGCTGGA  193
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGGACTTGAACATTC-AGAAATACCATGTTACAGGAAGCCAAAAGCTGGA  199

seq1  ATGTTAAAATTAAAAGTAAGGCCAAAGCCAGGCATG-AAGGCACACACCT  242
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGTT-AAATTAAAAGTAAGGCCAAAGCCAGGCATGAAAGGCACACACCT  248

seq1  CTGTTCCTAGCACTAGGGAGGCAGAGACAGAAGGGTTGACAGTTTTAGGC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTAGCACTAGGGAGGCAGAGACAGAAGGGTTGACAGTTTTAGGC  298

seq1  CAGTTGTGGAAACACGGTCATATCTTGTCTCAGAATAAATAAACAAAACA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTGGAAACACGGTCATATCTTGTCTCAGAATAAATAAACAAAACA  348

seq1  GATAAGTAGATAGGTAAACAAACAAAC-AAACAAACAGCACATAATATTA  391
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GATAAGTAGATAGGTAAACAAACAAACAAAACAAACAGCACATAATATTA  398

seq1  ACATAGACTATTCTAGGTAAGTGTCAATACAATAAGTGTTTAATAACATG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGACTATTCTAGGTAAGTGTCAATACAATAAGTGTTTAATAACATG  448

seq1  GACAGCAAGACCGGGCTCACCCTCAGGATAGCATTCACATCTGACAAGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAAGACCGGGCTCACCCTCAGGATAGCATTCACATCTGACAAGAA  498

seq1  AGAGAGAAGATGGGATGGAGGCATCAATACTTGTATACTTTCCTCTTATG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGATGGGATGGAGGCATCAATACTTGTATACTTTCCTCTTATG  548

seq1  TTTAAAAAAAGTATCTGGAGCATTGGGGCGGTGGTGCTGCACACCTTTAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAGTATCTGGAGCATTGGGGCGGTGGTGCTGCACACCTTTAA  598

seq1  CCCCAGCACTCGGGAGGCAGAGGCAGGCAGATCTCTGAGTTTAAGGCCAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGCACTCGGGAGGCAGAGGCAGGCAGATCTCTGAGTTTAAGGCCAG  648

seq1  CCTGCTCTACTAGTAACTTCTAGGACAGCCAGGGCTACACAGAGAAACCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCTACTAGTAACTTCTAGGACAGCCAGGGCTACACAGAGAAACCC  698

seq1  TGCTTTTTTCCACTCACATACACATAAAAATTGAAAGTACCTAAAGCAAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTTTCCACTCACATACACATAAAAATTGAAAGTACCTAAAGCAAA  748

seq1  TATGTTAGCCATCATCAGAAGAGGGAAGTAGAGGGTTTTTTTTTTCCCTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAGCCATCATCAGAAGAGGGAAGTAGAGGGTTTTTTTTTTCCCTG  798

seq1  CCACATCTTCCTCCTAGCCACCAGTTGTCCAAAACTCCTTAAGTGGATGA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTTCCTCCTAGCCACCAGTTGTCCAAAACTCCTTAAGTGGATGA  848

seq1  TGTAATTAAGGTGTTTTCAATGAGTTGTGCCACAGCCACGGAAACTGCTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAAGGTGTTTTCAATGAGTTGTGCCACAGCCACGGAAACTGCTG  898

seq1  TTGATGCTCTGGCTGAAGAAGGGTTACGTGATCCGAATCGATGCTGGGAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCTCTGGCTGAAGAAGGGTTACGTGATCCGAATCGATGCTGGGAA  948

seq1  CGACAAACAAGATTTCCCCATAGAGCACAGTGTCTTGACCCACGGATGGC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAAACAAGATTTCCCCATAGAGCACAGTGTCTTGACCCACGGATGGC  998

seq1  AGAGTGTGTGTGCTTTTGAGTAAGGGGAATTC  1023
      ||||||||||||||||||||||||||||||||
seq2  AGAGTGTGTGTGCTTTTGAGTAAGGGGAATTC  1030

seq1: chr7_85852034_85853056
seq2: B6Ng01-149N12.g_70_1083

seq1  GAATTCCAAAACAACTTGGCTGCAGAATGAGACCCTGTCTCAAAAAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAACAACTTGGCTGCAGAATGAGACCCTGTCTCAAAAAATCC  50

seq1  AAAGAGCATCTGCAGTTTTATCCAAACATGGCTGACTGCACACACTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCATCTGCAGTTTTATCCAAACATGGCTGACTGCACACACTCCCA  100

seq1  CAGTTATTCTCCAAGGCTACTTTGTACAAGAGTGGCAGAGCCAAATCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTCTCCAAGGCTACTTTGTACAAGAGTGGCAGAGCCAAATCATT  150

seq1  GCCACAGAGATCACATGACTTGAGAGATTTCAACATTCCTTCTCTGGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGAGATCACATGACTTGAGAGATTTCAACATTCCTTCTCTGGTCC  200

seq1  TTGGCATAAGGGTACGTTTGCTGTCCCTGCGCTCTGCCATACTTCTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATAAGGGTACGTTTGCTGTCCCTGCGCTCTGCCATACTTCTGTTG  250

seq1  TCTACTGGGAAACAGTTCTTTGATGGTCCCAGCTTCCATAGACGGGGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGGGAAACAGTTCTTTGATGGTCCCAGCTTCCATAGACGGGGATC  300

seq1  AGGTAATACCCATGTTCCTTTGCCCCTCCAACCTTTGTGGTGTTAATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATACCCATGTTCCTTTGCCCCTCCAACCTTTGTGGTGTTAATGTC  350

seq1  TCCTTGAGAGCCTTCCCAAAATAAAGCACAAGAATCAGAAGCTGCAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGAGCCTTCCCAAAATAAAGCACAAGAATCAGAAGCTGCAGCCT  400

seq1  GGTGGGCTGCAATGACTTGCTTAAGAGCATGCAACTAGAAAGGAGCATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTGCAATGACTTGCTTAAGAGCATGCAACTAGAAAGGAGCATAT  450

seq1  TCAAGTGTCAAGTCCAGAAGTTTTGCCCTGCAAGCTTGACACTCTCCCTC  500
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCAAGTGTCAAGTCCAGAAGTTTTGCCCTGTAAGCTTGACACTCTCCCTC  500

seq1  CATATTGTCTCATATTGCCCATACATGGAACCCAGAGAACACCTTAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTCTCATATTGCCCATACATGGAACCCAGAGAACACCTTAGCTT  550

seq1  TAGGGAGCTGGGATTCCTTCAGTGATGGAAACCCCAGACCAGAGATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGCTGGGATTCCTTCAGTGATGGAAACCCCAGACCAGAGATGACT  600

seq1  TCCCAGGAATGTTGGTTGCATGGGGTTTATGAGCAGCATTTGTCTAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGAATGTTGGTTGCATGGGGTTTATGAGCAGCATTTGTCTAACAA  650

seq1  AGTAATTTCTGAACATCTCACAT-CCTTGTCACAATAGCAGAAGGCATCT  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGTAATTTCTGAACATCTCACATCCCTTGTCACAATAGCAGAAGGCATCT  700

seq1  CCCCGTGTATTTGTTTTTTCCCAGTGCTGGCACGACACGGGAGCTCCTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTGTATTTGTTTTTTCCCAGTGCTGGCACGACACGGGAGCTCCTGG  750

seq1  GCCTGAGAGGCGGAGATAAATATAGCTGTTCTTTACTCTCTAGTCGGGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGAGGCGGAGATAAATATAGCTGTTCTTTACTCTCTAGTCGGGTT  800

seq1  GCCTGCATCCACAACAAATAGACATTGTCACCTGACACACATCAAACCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATCCACAACAAATAGACATTGTCACCTGACACACATCAAACCTG  850

seq1  CACACATGCTCACGGAAGCTTGCATCACAGACGTTTCCCAGATTAGCCCC  899
      ||||||||||||| |||||||||||||||||||||| |||||||| ||||
seq2  CACACATGCTCAC-GAAGCTTGCATCACAGACGTTT-CCAGATTA-CCCC  897

seq1  AACCTGGGAAGGGGCACAGGTTTCTCTAATATGATCCCAACTGGGCTGTG  949
      |||||||||||||||||| |||||||||||||||| |||||| |||||||
seq2  AACCTGGGAAGGGGCACA-GTTTCTCTAATATGAT-CCAACT-GGCTGTG  944

seq1  TGGGGGTTACTAGGAGGCAGGTTTGGGTTCTGTCAGAAGGTTTTTTTTTT  999
      ||||||||||||||||||||  ||||| ||||||| || |||||||||||
seq2  TGGGGGTTACTAGGAGGCAG--TTGGG-TCTGTCA-AAAGTTTTTTTTTT  990

seq1  TCTCTAGTGAGGACAGGATGAATG  1023
        ||||||||||||||||||||||
seq2  CTTCTAGTGAGGACAGGATGAATG  1014