BAC Information

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BAC

Clone NameB6Ng01-150P18
Chromosome7 (Build37)
Map Location 113,115,538 - 113,116,094
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856
Downstream geneLOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966, LOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150P18.bB6Ng01-150P18.g
ACCDH946922DH946923
length1,162552
definitionDH946922|Mus musculus domesticus DNA, BAC clone: B6Ng01-150P18, 5' end.DH946923|Mus musculus domesticus DNA, BAC clone: B6Ng01-150P18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagatcctaggcatgttacagcacttagaagtggtacctcctc
tggggactcttgggctgcctgctgtgttcaaaaccaatgtagaccagcac
tgaccataattaacccaaggtgctggacaggtagggctcttgtttccttg
ctcctgctgtcacagatccctcaccattgttttgggacagatatttcatt
ccactcacaagttatcttaagatcctgagcaaacaagttttccagcatca
tggagagtcctctggggactgtgggagtctgctgagtttgcatccaaggt
gggtagagctggcattggctggaagccttgtatttctttaagggatttat
ttatgtccttgttggagtcctctatcatcatcatgagatgtgattttaaa
tcagagtcttgcttttctggtgtgttgggctaccagtgcccactgtggtg
ggagaattctgttctgatgatgccaaatatccttggcttctgttgtttat
gttcgtgtgcttgcctttcgctatctgcttattgctggtgttaggtggtc
ttgttgtctctgactgtggcttgtccttcttgttagtctgtgtgtcagta
tttctgggtgaccagttctctctgggaggaattttggtatggagattagt
ggtacagggtcagctctgggctgtagacagaaccagaagcatcctgaccc
caactgaaccttggttcctttgccctgattagtcttggagggtccctctt
gggccaggaatttgacaagaagtgttggtcgttcctgtgcttgcaggcta
gtaggcactcctgggagaccagctctcttctggcattatttgtgtatgta
gttctctagcacagaatcaactctgggcacagatggtaaccagaagactc
ctgtccaagcagctcctagttcctatatccccatggttccatccagcttc
tctgagcagtagtgtggtctacctttgctcatagcccatcttgctctctt
gggaggccgctctcctcctgcactattttgggtatagaatcctgtggcga
aggactggattcaggcacaaattgtttttagccttaaagataggaatcta
ccattgcacctattaacctagctggtcttcatgtgtacggatcctggaat
tgggtgtagagc
ccttaaatccctctggaaatagatactgaatctggcacagaggaataagg
gacctgctattgattagtattggagaatatggatagcagcagtggggagg
aggagcctgaggatggattgatggtaggagagaggtaggaaagtccctgg
gaggggatgagtcaggaagacaacatagtaagaagtattcaagggaagtt
ttatgatggaaaaataataaagtcatgaaattttctaaaatgtcatgggg
acatggagtgggggcaacaaccacaaatgaccaggaagaaatgggaaata
tctgtgcagtaacagagcagtctttttaggtttggtaggaattccatcca
gtcccataatagagtgagtaaaaatccatttcaataaaagaaaaaaattt
aaaaacattatttctgcttgttacattcattcattctagagcaaacaaca
aaaattcatgtttatttatcaatgaattgtatttatgtgatataaatcat
attgattttatatatgatcatatttatacttctgtcatatattacatgtg
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113115538_113116094
seq2: B6Ng01-150P18.g_67_624 (reverse)

seq1  AACACATGTAATATATGACAGAAGTATAAATATGATCATATAT-AAATCA  49
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACACATGTAATATATGACAGAAGTATAAATATGATCATATATAAAATCA  50

seq1  ATATGATTTATATCACATAAATACAATTCATTGATAAATAAACATGAATT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATTTATATCACATAAATACAATTCATTGATAAATAAACATGAATT  100

seq1  TTTGTTGTTTGCTCTAGAATGAATGAATGTAACAAGCAGAAATAATGTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTGCTCTAGAATGAATGAATGTAACAAGCAGAAATAATGTTT  150

seq1  TTAAATTTTTTTCTTTTATTGAAATGGATTTTTACTCACTCTATTATGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTTTTCTTTTATTGAAATGGATTTTTACTCACTCTATTATGGG  200

seq1  ACTGGATGGAATTCCTACCAAACCTAAAAAGACTGCTCTGTTACTGCACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATGGAATTCCTACCAAACCTAAAAAGACTGCTCTGTTACTGCACA  250

seq1  GATATTTCCCATTTCTTCCTGGTCATTTGTGGTTGTTGCCCCCACTCCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTCCCATTTCTTCCTGGTCATTTGTGGTTGTTGCCCCCACTCCAT  300

seq1  GTCCCCATGACATTTTAGAAAATTTCATGACTTTATTATTTTTCCATCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCATGACATTTTAGAAAATTTCATGACTTTATTATTTTTCCATCAT  350

seq1  AAAACTTCCCTTGAATACTTCTTACTATGTTGTCTTCCTGACTCATCCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTCCCTTGAATACTTCTTACTATGTTGTCTTCCTGACTCATCCCC  400

seq1  TCCCAGGGACTTTCCTACCTCTCTCCTACCATCAATCCATCCTCAGGCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGACTTTCCTACCTCTCTCCTACCATCAATCCATCCTCAGGCTC  450

seq1  CTCCTCCCCACTGCTGCTATCCATATTCTCCAATACTAATCAATAGCAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCACTGCTGCTATCCATATTCTCCAATACTAATCAATAGCAGG  500

seq1  TCCCTTATTCCTCTGTGCCAGATTCAGTATCTATTTCCAGAGGGATTTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATTCCTCTGTGCCAGATTCAGTATCTATTTCCAGAGGGATTTAA  550

seq1  GGGAATTC  557
      ||||||||
seq2  GGGAATTC  558