BAC Information

Click to search

BAC

Clone NameB6Ng01-151J06
Chromosome7 (Build37)
Map Location 104,889,636 - 104,951,866
singlet/doubletdoublet
Overlap genenone
Upstream geneOdz4, Nars2, Gab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594
Downstream genePak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151J06.bB6Ng01-151J06.g
ACCDH947362DH947363
length1,0241,007
definitionDH947362|Mus musculus domesticus DNA, BAC clone: B6Ng01-151J06, 5' end.DH947363|Mus musculus domesticus DNA, BAC clone: B6Ng01-151J06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,889,636 - 104,890,663)(104,950,858 - 104,951,866)
sequence
gaattcacccacgtgggtggcccgcagtgagcagagtgggaacagctgcc
ggggctcccctgaccttgagcctagcagtgttctgagctgatgtatgtcg
caacgcttgccttagttcgggggtgactaagcaccatcctgcctcagtct
tgtcccacatggctctgtcacccacaagtccatctatttcctagagctga
gagggcagggcagcacagtcaggtgggtgaccttctgcacagtccagtct
catttcccaggctcaactgtcccttttataaccttatgaagattcccaga
ctgtagctcgcatctgttaccctaccatgctggtgcccgaggtaggattg
cctcaaatttgaaggaaaattcctttttaatgctaagatttctgtggtgc
caatagtcaaaaaaaaaaaaagttatttcataaaatataaagtttgtaga
gaaatgaagccctttctctttgtctatgtcaagcaaaagaatctaaggta
agttaaagccatttcttagccattactgtttggagagattgctttaaaac
cagtcctgtgagtgtgaccctttcaccaatcctagttcatcagaactcaa
ttggagattagttaacacatgtgtgtccatttcctgctgtgctaataagt
cagttttgttagtaagagccagatagaaaatctgtcttttgaactttgat
aaggctttaaaaatcatcacaatatgcattgtcattaagtagacttagga
cattgcttcagttaggaagcaagagccaagcaaatggtgcctgtgaggct
gagccctgttctgagctattccctgctgggtaaaacaatggctttcaggc
tgtgctttgtcctgggtggctgcatctctaagctccattgggctccattt
tggagggcaatagagaagtgaatggctctgaacctcatattcacagacct
gtccagcaacaccatgaggcacacactgatagcctttctttaaaatatta
tctttatgttatgtcgatgatgct
gaattctacagctattagcatcacagaaagactcaagagcctttgatgaa
agaacacaccaatactggttcaaaacaaaacaagcctgaatctgaccagg
tttctggggttgtaactcagtgctatagctcttgtctaacagtcgtgagg
ttctggttagaaaaaagggaaggagagggaagagggaggaggaaagaaaa
agaagagagagaatagggaaaagagagcggaaagcagagttggcctgtta
atatcctgctatagatttgtaagaaataaaaggatgtgctcgagaggttc
atactcatcgataactcaagtcccaggaaatgcggtgccttctttcgccc
tcctctggtaccagacacatatgtggtgcatagacatacatgcaggcaaa
atacttacataaaattaaattaaattagtctttaaaataaataaatatat
aggaccaaggaacctgtttaaacaataggatacaaaatatgaagtgaata
actctatagaacaatgttgtttcttcaaataaattgaactgatgacaaaa
gggattgagaggtttgatttgaatgaaaaatgttccccatttgactgctt
ggccccattttggtagtgctgtttgggaactcataggagatgtggccttg
ttggaagacgtatgtcactgaatcaggctttgagagttaaaagactgtga
tttgcactttgctctatctgctttcaaacttatgggtctagatttgactt
ctcagcttcttgctcctgtttaccatgcctactgcctccaccccaccagc
atggactctaaccctcttaactgtaaacccaaataactttcttctaaaat
ttgcctcggccatggtgtttcatcacagtaacgcaaaagtattaatacaa
aggaaaacttgggaaatgatgagacatcataaacacttatgaaacctatc
tggaccttttagggggagatggggaaaacaaggattcactaagtgaaact
gggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104889636_104890663
seq2: B6Ng01-151J06.b_46_1069

seq1  GAATTCACCCACGTGGGTGGCCCGCAGTGAGCAGAGTGGGAACAGCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCACGTGGGTGGCCCGCAGTGAGCAGAGTGGGAACAGCTGCC  50

seq1  GGGGCTCCCCTGACCTTGAGCCTAGCAGTGTTCTGAGCTGATGTATGTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCCCCTGACCTTGAGCCTAGCAGTGTTCTGAGCTGATGTATGTCG  100

seq1  CAACGCTTGCCTTAGTTCGGGGGTGACTAAGCACCATCCTGCCTCAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGCTTGCCTTAGTTCGGGGGTGACTAAGCACCATCCTGCCTCAGTCT  150

seq1  TGTCCCACATGGCTCTGTCACCCACAAGTCCATCTATTTCCTAGAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCACATGGCTCTGTCACCCACAAGTCCATCTATTTCCTAGAGCTGA  200

seq1  GAGGGCAGGGCAGCACAGTCAGGTGGGTGACCTTCTGCACAGTCCAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGGGCAGCACAGTCAGGTGGGTGACCTTCTGCACAGTCCAGTCT  250

seq1  CATTTCCCAGGCTCAACTGTCCCTTTTATAACCTTATGAAGATTCCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCAGGCTCAACTGTCCCTTTTATAACCTTATGAAGATTCCCAGA  300

seq1  CTGTAGCTCGCATCTGTTACCCTACCATGCTGGTGCCCGAGGTAGGATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCTCGCATCTGTTACCCTACCATGCTGGTGCCCGAGGTAGGATTG  350

seq1  CCTCAAATTTGAAGGAAAATTCCTTTTTAATGCTAAGATTTCTGTGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAATTTGAAGGAAAATTCCTTTTTAATGCTAAGATTTCTGTGGTGC  400

seq1  CAATAGTCAAAAAAAAAAAAAGTTATTTCATAAAATATAAAGTTTGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTCAAAAAAAAAAAAAGTTATTTCATAAAATATAAAGTTTGTAGA  450

seq1  GAAATGAAGCCCTTTCTCTTTGTCTATGTCAAGCAAAAGAATCTAAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAGCCCTTTCTCTTTGTCTATGTCAAGCAAAAGAATCTAAGGTA  500

seq1  AGTTAAAGCCATTTCTTAGCCATTACTGTTTGGAGAGATTGCTTTAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGCCATTTCTTAGCCATTACTGTTTGGAGAGATTGCTTTAAAAC  550

seq1  CAGTCCTGTGAGTGTGACCCTTTCACCAATCCTAGTTCATCAGAACTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGTGAGTGTGACCCTTTCACCAATCCTAGTTCATCAGAACTCAA  600

seq1  TTGGAGATTAGTTAACACATGTGTGTCCATTTCCTGCTGTGCTAATAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGATTAGTTAACACATGTGTGTCCATTTCCTGCTGTGCTAATAAGT  650

seq1  CAGTTTTGTTAGTAAGAGCCAGATAGAAAATCTGTCTTTTGAACTTTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTGTTAGTAAGAGCCAGATAGAAAATCTGTCTTTTGAACTTTGAT  700

seq1  AAGGCTTTAAAAATCATCACAATATGCATTGTCATTAAGTAGACTTAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTAAAAATCATCACAATATGCATTGTCATTAAGTAGACTTAGGA  750

seq1  CATTGCTTCAGTTAGGAAGCAAGAGCCAAGCAAATGGTGCCTGTGAGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTTCAGTTAGGAAGCAAGAGCCAAGCAAATGGTGCCTGTGAGGCT  800

seq1  GAGCCCTGTTCTGAGCTATTCCCTGCTGGGTAAAACAATGGCTTTCAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCTGTTCTGAGCTATTCCCTGCTGGGTAAAACAATGGCTTTCAGGC  850

seq1  TGTGCTTTGTCCTGGGTGGCTGCATCTCTAAGCTCCATTGGGCTCCATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTGTCCTGGGTGGCTGCATCTCTAAGCTCCATTGGGCTCCATTT  900

seq1  T-GAGGGCAAATAGAGAAGTGAATGGCTCTGAACCTCATATCCACAGACC  949
      | |||||| |||||||||||||||||||||||||||||||| ||||||||
seq2  TGGAGGGC-AATAGAGAAGTGAATGGCTCTGAACCTCATATTCACAGACC  949

seq1  TGTCCAGCAACAACCATGAGGCACACACTGATAAGCCTTTCTTTAAAATA  999
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  TGTCCAGCAAC-ACCATGAGGCACACACTGAT-AGCCTTTCTTTAAAATA  997

seq1  TTTATCTTTATGTTATGTCGATGAATGCT  1028
       |||||||||||||||||||||| |||||
seq2  -TTATCTTTATGTTATGTCGATG-ATGCT  1024

seq1: chr7_104950858_104951866
seq2: B6Ng01-151J06.g_67_1073 (reverse)

seq1  CCAA-CCAGTTTTACATAGTGAAATCTTGTCT--CCCCTCTCCCCCTAAA  47
      |||| ||||||| || |||||||  ||||| |  ||| ||||||||||||
seq2  CCAACCCAGTTTCACTTAGTGAATCCTTGTTTTCCCCATCTCCCCCTAAA  50

seq1  AGGGTCCAGATAAGGTTTTCATAAGGTTGTTTTATTGATGTCTCATCATT  97
      | ||||||||||  | |||||||||  |||||   |||||||||||||||
seq2  A-GGTCCAGATA--GGTTTCATAAG--TGTTT--ATGATGTCTCATCATT  93

seq1  T-CCAAGTTTCCTTTTGTATTAATACTTTTGCGTTACTGTGATGAAACAC  146
      | |||||||| | |||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTTTTCCTTTGTATTAATACTTTTGCGTTACTGTGATGAAACAC  143

seq1  CATGGCCGAGGCAAATTTTAGAAGAAAGTTTATTTGGGTTTACAGTTAAG  196
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATGGCCGAGGCAAATTTTAGAAGAAAG-TTATTTGGGTTTACAGTTAAG  192

seq1  AGGGTTAGAGTCCATGCTGGTGGGGTGGAGGCAGTAGGCATGGTAAACAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAGAGTCCATGCTGGTGGGGTGGAGGCAGTAGGCATGGTAAACAG  242

seq1  GAGCAAGAAGCTGAGAAGTCAAATCTAGAACCATAAGTTTG-AAGCAGAT  295
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  GAGCAAGAAGCTGAGAAGTCAAATCTAGACCCATAAGTTTGAAAGCAGAT  292

seq1  AGAGCAAAGTGCAAATCACAGTCTTTTAACTCTCAAAGCCTGATTCAGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAAGTGCAAATCACAGTCTTTTAACTCTCAAAGCCTGATTCAGTG  342

seq1  ACATACGTCTTCCAACAAGGCCACATCTCCTATGAGTTCCCAAACAGCAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACGTCTTCCAACAAGGCCACATCTCCTATGAGTTCCCAAACAGCAC  392

seq1  TACC-AAATGGGGCCAAGCAGTCAAATGGGGAACATTTTTCATTCAAATC  444
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAATGGGGCCAAGCAGTCAAATGGGGAACATTTTTCATTCAAATC  442

seq1  AAACCTCTCAATCCCTTTTGTCATCAGTTCAATTTATTTGAAGAAACAAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCTCAATCCCTTTTGTCATCAGTTCAATTTATTTGAAGAAACAAC  492

seq1  ATTGTTCTATAGAGTTATTCACTTCATATTTTGTATCCTATTGTTTAAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTATAGAGTTATTCACTTCATATTTTGTATCCTATTGTTTAAAC  542

seq1  AGGTTCCTTGGTCCTATATATTTATTTATTTTAAAGACTAATTTAATTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCTTGGTCCTATATATTTATTTATTTTAAAGACTAATTTAATTTA  592

seq1  ATTTTATGTAAGTATTTTGCCTGCATGTATGTCTATGCACCACATATGTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGTAAGTATTTTGCCTGCATGTATGTCTATGCACCACATATGTG  642

seq1  TCTGGTACCAGAGGAGGGCGAAAGAAGGCACCGCATTTCCTGGGACTTGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACCAGAGGAGGGCGAAAGAAGGCACCGCATTTCCTGGGACTTGA  692

seq1  GTTATCGATGAGTATGAACCTCTCGAGCACATCCTTTTATTTCTTACAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCGATGAGTATGAACCTCTCGAGCACATCCTTTTATTTCTTACAAA  742

seq1  TCTATAGCAGGATATTAACAGGCCAACTCTGCTTTCCGCTCTCTTTTCCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGCAGGATATTAACAGGCCAACTCTGCTTTCCGCTCTCTTTTCCC  792

seq1  TATTCTCTCTCTTCTTTTTCTTTCCTCCTCCCTCTTCCCTCTCCTTCCCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTCTCTTCTTTTTCTTTCCTCCTCCCTCTTCCCTCTCCTTCCCT  842

seq1  TTTTTCTAACCAGAACCTCACGACTGTTAGACAAGAGCTATAGCACTGAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAACCAGAACCTCACGACTGTTAGACAAGAGCTATAGCACTGAG  892

seq1  TTACAACCCCAGAAACCTGGTCAGATTCAGGCTTGTTTTGTTTTGAACCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACCCCAGAAACCTGGTCAGATTCAGGCTTGTTTTGTTTTGAACCA  942

seq1  GTATTGGTGTGTTCTTTCATCAAAGGCTCTTGAGTCTTTCTGTGATGCTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGTGTGTTCTTTCATCAAAGGCTCTTGAGTCTTTCTGTGATGCTA  992

seq1  ATAGCTGTAGAATTC  1009
      |||||||||||||||
seq2  ATAGCTGTAGAATTC  1007