BAC Information

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BAC

Clone NameB6Ng01-152G16
Chromosome7 (Build37)
Map Location 91,648,638 - 91,813,316
singlet/doubletdoublet
Overlap geneLOC100039239, Fah, Zfand6
Upstream geneTmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
Downstream gene2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152G16.bB6Ng01-152G16.g
ACCDH947995DH947996
length1,103186
definitionDH947995|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G16, 5' end.DH947996|Mus musculus domesticus DNA, BAC clone: B6Ng01-152G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,648,638 - 91,649,746)(91,813,130 - 91,813,316)
sequence
gaattcctatgtgataattacagagcatttcataacatgctgcctccccc
cccacaattgtattagtcagtgttctcctgagaaacagaaacagaagcaa
cggaaaagagagatgatggattgggcaggtgtatggatggatagatgaca
gagaatatagaaaccaggccggataattacaaaggttaagattcaccact
ctttatcatttttaaattaaagacccagaaatagggatgacaaaatgccc
aaggccaaatgcctgagaattgatgaggtggaatgaattctgaaacaacc
aagttcaagtttcagggcagaggatccagtcaagtttgccctttagccct
attttgttctgcccaggccctcagtggatgagtcagtaccactcctatat
tgaaagagccatctgccttactcagcccacagccagaatcagtgtctcag
cactcccaaagttgatcagcctgggtgtctgtgggcctctcaggttggtg
cataaaactaaccatcattcagtcacatgctagctcttgccttgctcctg
cagccagaactgaacattaaaaaaaatcttatttttttcatccaagcaaa
gatatagtaacaaataaaataacttctgaaatacatgaaaaaaaatgggc
agcatggcaaattagcaatataaaaaagaataattagaaaataaataaac
attaaagtaagagcacaaagctgaatcagcaagcgtatactggaggcctg
gcactgttctctggttccatgggcaccaatgagttaattcatcaacctct
gaaggcaaggcctggtataacccacattttgttagacaaagtgagagctt
aaagatccttgtctgagttcatgaagctaaattaagaagcagagatggga
tttgaacttaaggaagcagagtccacagttcaaacttccaaaatgccact
cttctgcctgcagacctgctgactgtcaaattccttgccaatgaatgtca
cagtaagcctgaattacttttcccccaggtataattagcaacaacagcag
gaaatcaagagattcacaccacaaatattgagctagaaggttcctgaaaa
gga
tcatgtggatcgagttcacctttggaaataattagggcagggagagtgaa
tgaggttttttctccctaagaaaagtagggtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgccactacttttccacttaatcttagaagtatgacca
taagtggagtgatactgatagtactgacttcactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_91648638_91649746
seq2: B6Ng01-152G16.b_43_1145

seq1  GAATTCCTATGTGATAATTACAGAGCATTTCATAACATGCTGCCTCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGTGATAATTACAGAGCATTTCATAACATGCTGCCTCCCCC  50

seq1  CCCACAATTGTATTAGTCAGTGTTCTCCTGAGAAACAGAAACAGAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAATTGTATTAGTCAGTGTTCTCCTGAGAAACAGAAACAGAAGCAA  100

seq1  CGGAAAAGAGAGATGATGGATTGGGCAGGTGTATGGATGGATAGATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAAGAGAGATGATGGATTGGGCAGGTGTATGGATGGATAGATGACA  150

seq1  GAGAATATAGAAACCAGGCCGGATAATTACAAAGGTTAAGATTCACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATAGAAACCAGGCCGGATAATTACAAAGGTTAAGATTCACCACT  200

seq1  CTTTATCATTTTTAAATTAAAGACCCAGAAATAGGGATGACAAAATGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCATTTTTAAATTAAAGACCCAGAAATAGGGATGACAAAATGCCC  250

seq1  AAGGCCAAATGCCTGAGAATTGATGAGGTGGAATGAATTCTGAAACAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAATGCCTGAGAATTGATGAGGTGGAATGAATTCTGAAACAACC  300

seq1  AAGTTCAAGTTTCAGGGCAGAGGATCCAGTCAAGTTTGCCCTTTAGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGTTTCAGGGCAGAGGATCCAGTCAAGTTTGCCCTTTAGCCCT  350

seq1  ATTTTGTTCTGCCCAGGCCCTCAGTGGATGAGTCAGTACCACTCCTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCTGCCCAGGCCCTCAGTGGATGAGTCAGTACCACTCCTATAT  400

seq1  TGAAAGAGCCATCTGCCTTACTCAGCCCACAGCCAGAATCAGTGTCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGCCATCTGCCTTACTCAGCCCACAGCCAGAATCAGTGTCTCAG  450

seq1  CACTCCCAAAGTTGATCAGCCTGGGTGTCTGTGGGCCTCTCAGGTTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCAAAGTTGATCAGCCTGGGTGTCTGTGGGCCTCTCAGGTTGGTG  500

seq1  CATAAAACTAACCATCATTCAGTCACATGCTAGCTCTTGCCTTGCTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACTAACCATCATTCAGTCACATGCTAGCTCTTGCCTTGCTCCTG  550

seq1  CAGCCAGAACTGAACATTAAAAAAAATCTTATTTTTTTCATCCAAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAACTGAACATTAAAAAAAATCTTATTTTTTTCATCCAAGCAAA  600

seq1  GATATAGTAACAAATAAAATAACTTCTGAAATACATGAAAAAAAATGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGTAACAAATAAAATAACTTCTGAAATACATGAAAAAAAATGGGC  650

seq1  AGCATGGCAAATTAGCAATATAAAAAAGAATAATTAGAAAATAAATAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCAAATTAGCAATATAAAAAAGAATAATTAGAAAATAAATAAAC  700

seq1  ATTAAAGTAAGAGCACAAAGCTGAATCAGCAAGCGTATACTGGAGGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTAAGAGCACAAAGCTGAATCAGCAAGCGTATACTGGAGGCCTG  750

seq1  GCACTGTTCTCTGGTTCCATGGGCACCAATGAGTTAATTCATCAACCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTTCTCTGGTTCCATGGGCACCAATGAGTTAATTCATCAACCTCT  800

seq1  GAAGGCAAGGCCTGGTATAACCCACATTTTG-TAGACAAAGTGAGAGCTT  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAGGCAAGGCCTGGTATAACCCACATTTTGTTAGACAAAGTGAGAGCTT  850

seq1  AAAGATCCTTGTCTGAGTTCATGAAGCTAAA-TAAGAAGCAGAGATGGGA  898
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAGATCCTTGTCTGAGTTCATGAAGCTAAATTAAGAAGCAGAGATGGGA  900

seq1  TTTGAACTTAAGGAAGCAGAGTCCACAGTCCAAACTTCCAAAATGCCACT  948
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTGAACTTAAGGAAGCAGAGTCCACAGTTCAAACTTCCAAAATGCCACT  950

seq1  CTTCTGCCTGCAGACCTGCTGACTGTCACATTTCCTTGCCAATGAATGTC  998
      |||||||||||||||||||||||||||| | |||||||||||||||||||
seq2  CTTCTGCCTGCAGACCTGCTGACTGTCA-AATTCCTTGCCAATGAATGTC  999

seq1  ACAGTAAGCCTGAATTACTTTTCCCACAAGGTTATAATTAGCAACAACAG  1048
      ||||||||||||||||||||||||| ||  | ||||||||||||||||||
seq2  ACAGTAAGCCTGAATTACTTTTCCCCCA--GGTATAATTAGCAACAACAG  1047

seq1  CAGAAAATCAAGAGATACACACACACAAAAATAAATGAGCTAGAGGTTTC  1098
      ||| |||||||||||| ||||| |||||| ||   ||||||||| | |||
seq2  CAGGAAATCAAGAGATTCACAC-CACAAATAT---TGAGCTAGAAGGTTC  1093

seq1  CAGAAAAAGGA  1109
      | | |||||||
seq2  CTG-AAAAGGA  1103

seq1: chr7_91813130_91813316
seq2: B6Ng01-152G16.g_72_257 (reverse)

seq1  CCAGTGAAGTCAGTACTCTCTGGCTTCACTCCACTTTTGGTCCTACTTCT  50
      ||||||||||||||||| ||  |  ||||||||||| ||||| |||||||
seq2  CCAGTGAAGTCAGTACTATC-AGTATCACTCCACTTATGGTCATACTTCT  49

seq1  AAGGTTAAGTGGAAAAGTTGTGGCACACACACACACACACACACACACAC  100
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAGATTAAGTGGAAAAGTAGTGGCACACACACACACACACACACACACAC  99

seq1  ACACACACCCTACTTTTCTTAGGGAGAAAAAACCTCATTCACTCTCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCCTACTTTTCTTAGGGAGAAAAAACCTCATTCACTCTCCCTG  149

seq1  CCCTAATTATTTCCAAAGGTGAACTCGATCCACATGA  187
      |||||||||||||||||||||||||||||||||||||
seq2  CCCTAATTATTTCCAAAGGTGAACTCGATCCACATGA  186