BAC Information

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BAC

Clone NameB6Ng01-152J07
Chromosome7 (Build37)
Map Location 147,330,059 - 147,540,791
singlet/doubletdoublet
Overlap geneMtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60
Upstream geneStk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox
Downstream geneGA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152J07.bB6Ng01-152J07.g
ACCDH948120DH948121
length844900
definitionDH948120|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J07, 5' end.DH948121|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,330,059 - 147,330,899)(147,539,894 - 147,540,791)
sequence
gaattccaattagctgactgttggacaggtggatacccatgatcgggatg
agtaatgaggtgtgtgtgaggtctctaccctcctaagcgaggggtcagta
aggacaggctctctgaccctgttatttgtaagtgggttgatgagggatgc
atgaccaaaagatgtggcctgtttgttgcagattgtcccaaaagtcatgg
aactgatcaggtgcagctaccgctaccatcgagccgaggttggttgggtg
cagagctggggtgggtatgtggagttacccagtcccttcctacctgccgt
tctgagccttctttaatacagaagactgggctgtgtcccagccaggaccc
agcctttgtttttactgttctttagtgggaaatgctggtctttgtgttga
tgtccctttcctctgggctgtggtttcataacctgggttggataaagttg
aaactcttctgcttccacagaccccagaatactgcatcatggtggtcggt
gtccccaatgtaggcaaatcctccctcatcaactccctgaggcggcagca
cctcaggacaggtaggcagtctctgctgtgctgacttccattcctagagg
gcactgtggaagagtgaggtcagccctatgttgctttgtggcgttccttc
catagctcatggcctgctctgtccgctaaaaaggacagttcatggtctga
tggtgaacagcccttggctacacagtgtgtacttatgtgctttcacatgc
tcttggtagtgtatgtattttagactttggggataaattttatattgcct
tcatttttttttgtactaatagatagtttttattaattattttc
gaattctttcagacttgcttgccttgggaagtctatatatctacttatta
atgacatttttttggatatattcttcattggaagttttaattttagtcta
gttggattcccttaaatctaatttggctttttttctcctgatgagtttag
aattctcttagtgttttaggatctttacagcttacatatgaggtgtctag
tgaggccactttctcatgatgtctacttgcaatcctgctgcactgaggag
atgtctgtctcttccaacatcaaggctttacaagtatcatttcatttagt
aggttctctatgatttgggacttattttatagctttaccatttgaatata
gctgatagtgatagagggtaaaacattagcctgtcctactatgaaaaggt
ctctacctggtacttggacaagactagaagttgtgtgcaggatctgtggc
ctaggtatgaagactatggtttctccatgatgttaaacttcaactcagaa
gacctgacattgagttccaaggtgtgttggctagttttatgtcaacttga
tacaaagtagagtcattttggaagaagaactctcaactgagaaaatgctt
ctataattgcctgtagacaaatctggagtgcattttctaataaaaggatt
aaatgtggaatggttcagctcaccatgggcagtgtcacagctgggttagt
gggtcctggatgctataagaaagcagctgataatgacattctattatatt
catagatcagtgtctttgctcagtcatctccaaaaagctctttctgtagt
atatgaaattaatacagccacccataaccagacatcatgctgagtgtgag
agaacttggaacatttcagttcttaaatgggatgtctcttatcaaataag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147330059_147330899
seq2: B6Ng01-152J07.b_43_886

seq1  GAATTCCAATTAGCTGACTGTTGGACAGGTGGATACCCATGATCGGGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTAGCTGACTGTTGGACAGGTGGATACCCATGATCGGGATG  50

seq1  AGTAATGAGGTGTGTGTGAGGTCTCTACCCTCCTAAGCGAGGGGTCAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGAGGTGTGTGTGAGGTCTCTACCCTCCTAAGCGAGGGGTCAGTA  100

seq1  AGGACAGGCTCTCTGACCCTGTTATTTGTAAGTGGGTTGATGAGGGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGGCTCTCTGACCCTGTTATTTGTAAGTGGGTTGATGAGGGATGC  150

seq1  ATGACCAAAAGATGTGGCCTGTTTGTTGCAGATTGTCCCAAAAGTCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAAAGATGTGGCCTGTTTGTTGCAGATTGTCCCAAAAGTCATGG  200

seq1  AACTGATCAGGTGCAGCTACCGCTACCATCGAGCCGAGGTTGGTTGGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCAGGTGCAGCTACCGCTACCATCGAGCCGAGGTTGGTTGGGTG  250

seq1  CAGAGCTGGGGTGGGTATGTGGAGTTACCCAGTCCCTTCCTACCTGCCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTGGGGTGGGTATGTGGAGTTACCCAGTCCCTTCCTACCTGCCGT  300

seq1  TCTGAGCCTTCTTTAATACAGAAGACTGGGCTGTGTCCCAGCCAGGACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCTTCTTTAATACAGAAGACTGGGCTGTGTCCCAGCCAGGACCC  350

seq1  AGCCTTTGTTTTTACTGTTCTTTAGTGGGAAATGCTGGTCTTTGTGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGTTTTTACTGTTCTTTAGTGGGAAATGCTGGTCTTTGTGTTGA  400

seq1  TGTCCCTTTCCTCTGGGCTGTGGTTTCATAACCTGGGTTGGATAAAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTTTCCTCTGGGCTGTGGTTTCATAACCTGGGTTGGATAAAGTTG  450

seq1  AAACTCTTCTGCTTCCACAGACCCCAGAATACTGCATCATGGTGGTCGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCTGCTTCCACAGACCCCAGAATACTGCATCATGGTGGTCGGT  500

seq1  GTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAATGTAGGCAAATCCTCCCTCATCAACTCCCTGAGGCGGCAGCA  550

seq1  CCTCAGGACAGGTAGGCAGTCTCTGCTGTGCTGACTTCCATTCCTAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGACAGGTAGGCAGTCTCTGCTGTGCTGACTTCCATTCCTAGAGG  600

seq1  GCACTGTGGAAGAGTGAGGTCAGCCCTATGTTGCTTTGTGGCGTTCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGGAAGAGTGAGGTCAGCCCTATGTTGCTTTGTGGCGTTCCTTC  650

seq1  CATAGCTCATGGCCTGCTCTGTCCGCT-AAAAGGACAGTTCATGGTCTGA  699
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATAGCTCATGGCCTGCTCTGTCCGCTAAAAAGGACAGTTCATGGTCTGA  700

seq1  TGGTGAACAGCCCTTGGCTACACAGTGTGTACTTATGTGCTTTCACATGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAACAGCCCTTGGCTACACAGTGTGTACTTATGTGCTTTCACATGC  750

seq1  TCTTGGTAGTGTATGTATTTTAGACTTT-GGGATAAA-TTTATATTGCCT  797
      |||||||||||||||||||||||||||| |||||||| ||||||||||||
seq2  TCTTGGTAGTGTATGTATTTTAGACTTTGGGGATAAATTTTATATTGCCT  800

seq1  TCA-TTTTTTTTGTACTAATAGTATAGTCTTTATTAATTATTTTC  841
      ||| |||||||||||||||||| ||||| ||||||||||||||||
seq2  TCATTTTTTTTTGTACTAATAG-ATAGTTTTTATTAATTATTTTC  844

seq1: chr7_147539894_147540791
seq2: B6Ng01-152J07.g_72_971 (reverse)

seq1  CTTATTTGAT-AGAGACATTCCATTTAAG-ACTG-AATGTTCCAAGTTCT  47
      |||||||||| |||||||| ||||||||| |||| |||||||||||||||
seq2  CTTATTTGATAAGAGACATCCCATTTAAGAACTGAAATGTTCCAAGTTCT  50

seq1  CTCACACTCAGCATGATGTCTGGTTATGGGTGGCTGTATTAATTTTCATA  97
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCACACTCAGCATGATGTCTGGTTATGGGTGGCTGTATTAA-TTTCATA  99

seq1  TACTACAGAAAGAAGCTTTTTTGGAGATGACTGAGC-AAGACACTGATCT  146
      |||||||||||| ||| ||||||||||||||||||| |||||||||||||
seq2  TACTACAGAAAG-AGC-TTTTTGGAGATGACTGAGCAAAGACACTGATCT  147

seq1  ATGAATATAATAGAATGTCATTATCAGCCTGCTTTCTTATAGCATCCAGG  196
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGAATATAATAGAATGTCATTATCAG-CTGCTTTCTTATAGCATCCAGG  196

seq1  A-CCACTAACCCAGCTGTGACACTGCCCATGGTGAGCTGAACCATTCCAC  245
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTAACCCAGCTGTGACACTGCCCATGGTGAGCTGAACCATTCCAC  246

seq1  A-TTAATCC-TTTATTAGGAAAATGCACTCCAGATTTGTCTACAGGCAAT  293
      | ||||||| ||||||| ||||||||||||||||||||||||||||||||
seq2  ATTTAATCCTTTTATTA-GAAAATGCACTCCAGATTTGTCTACAGGCAAT  295

seq1  TATAGAAGCATTTTCTCAGTTGAGAGTTCTTCTTCCAAAATGACTCTACT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAGCATTTTCTCAGTTGAGAGTTCTTCTTCCAAAATGACTCTACT  345

seq1  TTGTATCAAGTTGACATAAAACTAGCCAACACACCTTGGAACTCAATGTC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCAAGTTGACATAAAACTAGCCAACACACCTTGGAACTCAATGTC  395

seq1  AGGTCTTCTGAGTTGAAGTTTAACATCATGGAGAAACCATAGTCTTCATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTCTGAGTTGAAGTTTAACATCATGGAGAAACCATAGTCTTCATA  445

seq1  CCTAGGCCACAGATCCTGCACACAACTTCTAGTCTTGTCCAAGTACCAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCCACAGATCCTGCACACAACTTCTAGTCTTGTCCAAGTACCAGG  495

seq1  TAGAGACCTTTTCATAGTAGGACAGGCTAATGTTTTACCCTCTATCACTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACCTTTTCATAGTAGGACAGGCTAATGTTTTACCCTCTATCACTA  545

seq1  TCAGCTATATTCAAATGGTAAAGCTATAAAATAAGTCCCAAATCATAGAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATATTCAAATGGTAAAGCTATAAAATAAGTCCCAAATCATAGAG  595

seq1  AACCTACTAAATGAAATGATACTTGTAAAGCCTTGATGTTGGAAGAGACA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTAAATGAAATGATACTTGTAAAGCCTTGATGTTGGAAGAGACA  645

seq1  GACATCTCCTCAGTGCAGCAGGATTGCAAGTAGACATCATGAGAAAGTGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTCCTCAGTGCAGCAGGATTGCAAGTAGACATCATGAGAAAGTGG  695

seq1  CCTCACTAGACACCTCATATGTAAGCTGTAAAGATCCTAAAACACTAAGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTAGACACCTCATATGTAAGCTGTAAAGATCCTAAAACACTAAGA  745

seq1  GAATTCTAAACTCATCAGGAGAAAAAAAGCCAAATTAGATTTAAGGGAAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACTCATCAGGAGAAAAAAAGCCAAATTAGATTTAAGGGAAT  795

seq1  CCAACTAGACTAAAATTAAAACTTCCAATGAAGAATATATCCAAAAAAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTAGACTAAAATTAAAACTTCCAATGAAGAATATATCCAAAAAAAT  845

seq1  GTCATTAATAAGTAGATATATAGACTTCCCAAGGCAAGCAAGTCTGAAAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTAATAAGTAGATATATAGACTTCCCAAGGCAAGCAAGTCTGAAAG  895

seq1  AATTC  898
      |||||
seq2  AATTC  900