BAC Information

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BAC

Clone NameB6Ng01-152L01
Chromosome7 (Build37)
Map Location 85,964,346 - 86,172,097
singlet/doubletdoublet
Overlap geneDet1, Isg20l1, Isg20
Upstream geneA330068G13Rik, Ntrk3, Mrpl46, Mrps11
Downstream geneAcan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152L01.bB6Ng01-152L01.g
ACCDH948204DH948205
length1,028989
definitionDH948204|Mus musculus domesticus DNA, BAC clone: B6Ng01-152L01, 5' end.DH948205|Mus musculus domesticus DNA, BAC clone: B6Ng01-152L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,171,062 - 86,172,097)(85,964,346 - 85,965,331)
sequence
gaattccaggtagagaaaaaccaacatatgggaaagaggaaatcattact
aagaatttcatccatagcattgaggaaagagggaaaaaaaaacttgtatt
ttacaagtccatggggtgcaagttcaggggacaaagtgactcaaaacaaa
cactcaagtcagacatgacagaaaagtctcagaacactaaacactagagt
aaattctgaatttacaaaaagaaaaggcaggtcatgtccgcacaagggct
gcattaaaatcagattgtagccgcaggaagcaataaggcacagtaagtaa
cggcgcgtaaataacacagtaagactggcattctggataaatgaagaaaa
atggtttgtgtgtaactatcctgagtcatttctgcgtcatacctctgaag
catggagggtttgatgctggggttcaggagcgacaaggaagggatggagg
gacgttagcaagtaccaagggaaacattagcaatgaactcggtaaatgtc
gttcataaaaattcaggaggaacaactagaagcatgaaaatagaacccat
gacttttagggggcagaagaaaaaaaaaggacacatatagcagaaaacag
aaaaggggacagactgtgtgtgctaaatacggcaagtgagtgtttttagg
cagttttgggtctgggtagttggccagggacagccctctctaccagtgag
acccgaaatctcagcacacttattactctgtccaaggacagggacagggg
ctgcaggagggtgtggagagagaggcagctagaagctctgtaaggagcaa
tcataggtggctgaaataagcctacagattagctgttgatagaggagcag
ttcgctgcccagaggggttgacaagatggttttgttgatgttttcttttc
ttttctaatttcacttctaaatttactttttggggtgggggctacaagag
tagagggtgaaagaactgggagaaggagtggatggggtgcatgatgtaaa
ttcccaaatttaataaaaaattatacta
gaattcaaaactatcatggctagcgctgggggtcagaggaaagggcaaaa
atggtagaagattcttgcaggttatacagggatatgctgtggtgaggggg
ctggggggctagttagctggaacaacctaggaatcaactgaaggcttgtt
tgaggtagtagaataactagctgtcctttccagaagttggagaagctgta
ggtgggagacaagaaagtaatggcttttcctggcaaacagaaacccactt
ttcaaggttcccgaggaatgccaattttgagtagcaatccttctttctac
cggtctgagaccagcctgaggagagcacagactgcaacccacaatactgt
ccatggcactgccatgttgggcgtggggacgacaggcatgtgccaccatt
cagacacgatattttcctaatacatttctcaaccttctaaaccttgcaat
gcttcccacccctgtgcacaccaccagtttgataaccaggaatagcaggc
tatgtttaactatccattgttacatcccctggaggaccccatcaggaatg
tttctcaaactcttaagtttctaacatgaaaacgtatgtactttttactc
ctccccaaaatgatgctgactgaggtgttgttgttgttgttttccagctg
ccctcaggaggacagattccaaacctctgaatctgcaacaaaagctttca
aagagcagcctgaggagtctgagttttgacctcatgagcaggcattccca
gcctttcgacatagggacgtgacatcacggtctatagagttcatacacac
acagagcaccatgcaatatagatccatgacatatcctgggttttaagttt
tgcagtttcgtgctgggtggcgtttcaaggcattgttgaagaactttgca
gtttctccagggttccataatcagcttacatcatctggattcctgtttcc
tgtattggatcacctaacacagaatttatcagctcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86171062_86172097
seq2: B6Ng01-152L01.b_43_1070 (reverse)

seq1  TAGTATAATTTTTTATTAAATTTTGGGAATTTTACATCATGCACCCCAAT  50
      |||||||||||||||||||| |||||||| ||||||||||||||||||  
seq2  TAGTATAATTTTTTATTAAA-TTTGGGAA-TTTACATCATGCACCCCA--  46

seq1  CCCACTCC-TCTCCCAGTTCTTTCACCCTCTACTCTTGTAGCCCCCACCC  99
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCCTTCTCCCAGTTCTTTCACCCTCTACTCTTGTAGCCCCCACCC  96

seq1  CAAAAAAAGTAAATTTAAGAAGTGAAAATTAGAAAAGAAAAGAAAACATC  149
      |  ||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  C--AAAAAGTAAATTT-AGAAGTG-AAATTAGAAAAGAAAAGAAAACATC  142

seq1  AACAAAAACCATCTTGTCAACCCCTCTGGGCAGCGAACTGCTCCTCTATC  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAC-AAAACCATCTTGTCAACCCCTCTGGGCAGCGAACTGCTCCTCTATC  191

seq1  AACAGCTAATCTGTAGGCTTATTTCAGCCACCTATGATTGCTCCTTACAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAATCTGTAGGCTTATTTCAGCCACCTATGATTGCTCCTTACAG  241

seq1  AGCTTCTAGCTGCCTCTCTCTCCACACCCTCCTGCAGCCCCTGTCCCTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTAGCTGCCTCTCTCTCCACACCCTCCTGCAGCCCCTGTCCCTGT  291

seq1  CCTTGGACAGAGTAATAAGTGTGCTGAGATTTCGGGTCTCACTGGTAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGACAGAGTAATAAGTGTGCTGAGATTTCGGGTCTCACTGGTAGAG  341

seq1  AGGGCTGTCCCTGGCCAACTACCCAGACCCAAAACTGCCTAAAAACACTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGTCCCTGGCCAACTACCCAGACCCAAAACTGCCTAAAAACACTC  391

seq1  ACTTGCCGTATTTAGCACACACAGTCTGTCCCCTTTTCTGTTTTCTGCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCGTATTTAGCACACACAGTCTGTCCCCTTTTCTGTTTTCTGCTA  441

seq1  TATGTGTCCTTTTTTTTTCTTCTGCCCCCTAAAAGTCATGGGTTCTATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTCCTTTTTTTTTCTTCTGCCCCCTAAAAGTCATGGGTTCTATTT  491

seq1  TCATGCTTCTAGTTGTTCCTCCTGAATTTTTATGAACGACATTTACCGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTTCTAGTTGTTCCTCCTGAATTTTTATGAACGACATTTACCGAG  541

seq1  TTCATTGCTAATGTTTCCCTTGGTACTTGCTAACGTCCCTCCATCCCTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGCTAATGTTTCCCTTGGTACTTGCTAACGTCCCTCCATCCCTTC  591

seq1  CTTGTCGCTCCTGAACCCCAGCATCAAACCCTCCATGCTTCAGAGGTATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCGCTCCTGAACCCCAGCATCAAACCCTCCATGCTTCAGAGGTATG  641

seq1  ACGCAGAAATGACTCAGGATAGTTACACACAAACCATTTTTCTTCATTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGAAATGACTCAGGATAGTTACACACAAACCATTTTTCTTCATTTA  691

seq1  TCCAGAATGCCAGTCTTACTGTGTTATTTACGCGCCGTTACTTACTGTGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAATGCCAGTCTTACTGTGTTATTTACGCGCCGTTACTTACTGTGC  741

seq1  CTTATTGCTTCCTGCGGCTACAATCTGATTTTAATGCAGCCCTTGTGCGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGCTTCCTGCGGCTACAATCTGATTTTAATGCAGCCCTTGTGCGG  791

seq1  ACATGACCTGCCTTTTCTTTTTGTAAATTCAGAATTTACTCTAGTGTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACCTGCCTTTTCTTTTTGTAAATTCAGAATTTACTCTAGTGTTTA  841

seq1  GTGTTCTGAGACTTTTCTGTCATGTCTGACTTGAGTGTTTGTTTTGAGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTGAGACTTTTCTGTCATGTCTGACTTGAGTGTTTGTTTTGAGTC  891

seq1  ACTTTGTCCCCTGAACTTGCACCCCATGGACTTGTAAAATACAAGTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTCCCCTGAACTTGCACCCCATGGACTTGTAAAATACAAGTTTTT  941

seq1  TTTTCCCTCTTTCCTCAATGCTATGGATGAAATTCTTAGTAATGATTTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTCTTTCCTCAATGCTATGGATGAAATTCTTAGTAATGATTTCC  991

seq1  TCTTTCCCATATGTTGGTTTTTCTCTACCTGGAATTC  1036
      |||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCCATATGTTGGTTTTTCTCTACCTGGAATTC  1028

seq1: chr7_85964346_85965331
seq2: B6Ng01-152L01.g_71_1059

seq1  GAATTCAAAACTATCATGGCTAGCGCTGGGGGTCAGAGGAAAGGGCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACTATCATGGCTAGCGCTGGGGGTCAGAGGAAAGGGCAAAA  50

seq1  ATGGTAGAAGATTCTTGCAGGTTATACAGGGATATGCTGTGGTGAGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGAAGATTCTTGCAGGTTATACAGGGATATGCTGTGGTGAGGGGG  100

seq1  CTGGGGGGCTAGTTAGCTGGAACAACCTAGGAATCAACTGAAGGCTTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGGCTAGTTAGCTGGAACAACCTAGGAATCAACTGAAGGCTTGTT  150

seq1  TGAGGTAGTAGAATAACTAGCTGTCCTTTCCAGAAGTTGGAGAAGCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAGTAGAATAACTAGCTGTCCTTTCCAGAAGTTGGAGAAGCTGTA  200

seq1  GGTGGGAGACAAGAAAGTAATGGCTTTTCCTGGCAAACAGAAACCCACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAGACAAGAAAGTAATGGCTTTTCCTGGCAAACAGAAACCCACTT  250

seq1  TTCAAGGTTCCCGAGGAATGCCAATTTTGAGTAGCAATCCTTCTTTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTTCCCGAGGAATGCCAATTTTGAGTAGCAATCCTTCTTTCTAC  300

seq1  CGGTCTGAGACCAGCCTGAGGAGAGCACAGACTGCAACCCACAATACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTGAGACCAGCCTGAGGAGAGCACAGACTGCAACCCACAATACTGT  350

seq1  CCATGGCACTGCCATGTTGGGCGTGGGGACGACAGGCATGTGCCACCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCACTGCCATGTTGGGCGTGGGGACGACAGGCATGTGCCACCATT  400

seq1  CAGACACGATATTTTCCTAATACATTTCTCAACCTTCTAAACCTTGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACGATATTTTCCTAATACATTTCTCAACCTTCTAAACCTTGCAAT  450

seq1  GCTTCCCACCCCTGTGCACACCACCAGTTTGATAACCAGGAATAGCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCACCCCTGTGCACACCACCAGTTTGATAACCAGGAATAGCAGGC  500

seq1  TATGTTTAACTATCCATTGTTACATCCCCTGGAGGACCCCATCAGGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTAACTATCCATTGTTACATCCCCTGGAGGACCCCATCAGGAATG  550

seq1  TTTCTCAAACTCTTAAGTTTCTAACATGAAAACGTATGTACTTTTTACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAACTCTTAAGTTTCTAACATGAAAACGTATGTACTTTTTACTC  600

seq1  CTCCCCAAAATGATGCTGACTGAGGTGTTGTTGTTGTTGTTTTCCAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAAAATGATGCTGACTGAGGTGTTGTTGTTGTTGTTTTCCAGCTG  650

seq1  CCCTCAGGAGGACAGATTCCAAACCTCTGAATCTGCAACAAAAGCTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGGAGGACAGATTCCAAACCTCTGAATCTGCAACAAAAGCTTTCA  700

seq1  AAGAGCAGCCTGAGGAGTCTGAG-TTTGACCTCATGAGCAGGCATTCCCA  749
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGAGCAGCCTGAGGAGTCTGAGTTTTGACCTCATGAGCAGGCATTCCCA  750

seq1  GCCTTTCGACATAGGGACGTGACATCACGGTCTATAGAGTTCATACACAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCGACATAGGGACGTGACATCACGGTCTATAGAGTTCATACACAC  800

seq1  ACAGAGCACCATGCAATAGAGATCCAAGACATATCCTGGGTTTTAAG-TT  848
      |||||||||||||||||| ||||||| |||||||||||||||||||| ||
seq2  ACAGAGCACCATGCAATATAGATCCATGACATATCCTGGGTTTTAAGTTT  850

seq1  TGCAGTTTCGTGCTGGGTGGCG-TTCAAGGCATTGTTGAAGAAC-ATGCA  896
      |||||||||||||||||||||| |||||||||||||||||||||  ||||
seq2  TGCAGTTTCGTGCTGGGTGGCGTTTCAAGGCATTGTTGAAGAACTTTGCA  900

seq1  GTTTCTCCAGGGTTCCATATTCAGCTTACATCATCT-GATTCCTGTTTTC  945
      ||||||||||||||||||| |||||||||||||||| |||||||| ||||
seq2  GTTTCTCCAGGGTTCCATAATCAGCTTACATCATCTGGATTCCTG-TTTC  949

seq1  CTGTATTGGATCACCTATCTCAGGAGTTAATCAGCTCCTGT  986
      ||||||||||||||||| | || || || ||||||||||||
seq2  CTGTATTGGATCACCTAACACA-GAATTTATCAGCTCCTGT  989