BAC Information

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BAC

Clone NameB6Ng01-152M16
Chromosome9 (Build37)7 (Build37)
Map Location 79,130,184 - 79,130,6793,101,464 - 3,102,201
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152M16.bB6Ng01-152M16.g
ACCDH948279DH948280
length691740
definitionDH948279|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M16, 5' end.DH948280|Mus musculus domesticus DNA, BAC clone: B6Ng01-152M16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(79,130,184 - 79,130,679)(3,101,464 - 3,102,201)
sequence
gaattctaggccagcctggtctacagagtgagttccaggacagccagtac
tacacagagaaaccctgtctcaaaaaacaaaaaaaaaaaaaaagactcat
tgtcacaaaagatgtgtagcttttggggccacttctagaaatttggcagg
aatttgacattgggcccttgacaaggaagtaggcttcaggcaagaatttg
actttgggctaggacagggaagtaggctcagactttgtgctcatcctgat
aagcccctagaaacagtgatcctggaacttggtttattacactgtttgtt
ccttgactatttgtgtttattgtcttgctggttccttaacctagaactga
ccttattacttccatgtaagcctggcggtggtggcacacgcctttaatcc
cagcacttaggaggcagagccaggcagatttctgagttagaggtcaacct
ggtctacagagtaagtcccaggagagccagggctacacagagaaatcctg
tctcaaaaaccagaaaaaaaaaaaaatggtaaaaaaataaataaataaac
cctcctcagcctcagaactgcctggggtcatgctacagtgttgtctaatt
gccttttttctttttaatcctcattcctaccctggagaacctgttgacag
actgagctgacttggtcaaagatgcgttctttttttttttt
gaattcatgaactgattctgcagaattccaagactctactcatcactcct
cttaaagagcttttctcctgggagatgggaatatcctatctctgacactt
tccatcaaatctttcactgattcatcactttgtctgctcctcaattttat
gtgattgattgggatttaaggagaatattaaatgatactggccagaggta
ataaagttgtgtactgagggcgtgtctatattccttccagatcacagaga
cctagaagatctttggatgtgatcccttgtcaaacagtcatgttgcttga
ttcaaattcttctacaagattttctttatcatgtacaattctttattcag
tatcaaatcatttctttattcagttgagctgtaagtgggagtgtatacat
gtgtgtatgtattcacttacagctccttcagaagtttattttcttaaata
ggaatggggagtagagaggtcacaaaggaggaaatgagatggcagtggtg
gtacatggctttaatcccagcacttgggaggcagaggcaggtggatttct
gagtataaggacatccaaagctatactgagaaaccttgtctcaaagaaac
aaaaaacaaaaaaaaggaaggactgtgaggagtgcagggtaaaactaaaa
atgtccaatttgaggagttgtatgtaaacctaataaaacagtagcttttc
aatataaattgtgtgtgtgtgtttgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_79130184_79130679
seq2: B6Ng01-152M16.b_57_568

seq1  CCTGGTCTACAGAGTGAGTTTCAGGACAGCCAGGGCTACACAGAGAAACC  50
      |||||||||||||||||||| ||||||||||||  |||||||||||||||
seq2  CCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGTACTACACAGAGAAACC  50

seq1  CTGTCTCAGAAAA-AAAAAAGTTTCAAAATAATAATTGATTCAAA-----  94
      |||||||| |||| ||||||     |||| | | ||||   ||||     
seq2  CTGTCTCAAAAAACAAAAAAAAAAAAAAAGACTCATTGTCACAAAAGATG  100

seq1  --------------TCAGT--TAATAGTTACAGAGTAAAATGACCAAATC  128
                     || |  ||  | ||    || ||  ||||   || 
seq2  TGTAGCTTTTGGGGCCACTTCTAGAAATTTGGCAGGAATTTGAC---ATT  147

seq1  TATCCCCAGACTCCTAA--AAGTACACT--------GAAATCCTCACCT-  167
         |||  |||    ||  |||||  ||        ||| |  | || | 
seq2  GGGCCCTTGAC----AAGGAAGTAGGCTTCAGGCAAGAATT--TGACTTT  191

seq1  ---CTGATCCTGAGGAG-CTGCACTGTCTCTGTTCACAT-GTGA------  206
         ||    | | | ||   || | | || ||| | |||  |||      
seq2  GGGCTAGGACAGGGAAGTAGGCTCAGACTTTGTGCTCATCCTGATAAGCC  241

seq1  ACTATCAACTCT-AGCC--AAAGTAGTTTTCTTACA--GATAGT--CCTG  249
       |||  |||  | | ||   || | | ||| |||||  | | ||  | ||
seq2  CCTAGAAACAGTGATCCTGGAACTTGGTTTATTACACTGTTTGTTCCTTG  291

seq1  TCTCAACATATTTTTTGT-TTCATG-----TTATC------CTGACTCTC  287
       ||     | ||| |||| ||  ||     ||| |      |||||  | 
seq2  ACTATTTGTGTTTATTGTCTTGCTGGTTCCTTAACCTAGAACTGACCTTA  341

seq1  TCATGTGCAT---AGC----CAATGGAAGCATAAAACCAGAAATTTATAT  330
      | |  | |||   |||    |  |||  |||      ||    |||| ||
seq2  TTACTTCCATGTAAGCCTGGCGGTGGTGGCA------CACGCCTTTA-AT  384

seq1  TTCATTTCATTATAAAATTATATTAGGCTCTTAGATCTATTTGACATATT  380
        ||   || |         ||  ||||    ||| | |           
seq2  CCCA--GCACT---------TAGGAGGC----AGAGCCA----------G  409

seq1  CCAAATTTCTGTCTT-GTTGTCCTGCTGATACTGGAGGAACATGTCCC--  427
       || |||||||  || |  |||   ||| | ||  | ||  | |||||  
seq2  GCAGATTTCTGAGTTAGAGGTCAACCTGGT-CTACA-GAGTAAGTCCCAG  457

seq1  CAGAACATGTTCTTTAATGTCACTATGTATATGGCATATGAAGTTCTACT  477
       ||| |  |  ||  |                  || | ||| | ||   
seq2  GAGAGCCAGGGCTACA------------------CAGA-GAAATCCTGTC  488

seq1  TCA-----CAGAAAAAAAAAAAAA  496
      |||     ||||||||||||||||
seq2  TCAAAAACCAGAAAAAAAAAAAAA  512

seq1: chr7_3101464_3102201
seq2: B6Ng01-152M16.g_71_810

seq1  GAATTCATGAACTGATTCTGCAGAATTCCAAGACTCTACTCATCACTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAACTGATTCTGCAGAATTCCAAGACTCTACTCATCACTCCT  50

seq1  CTTAAAGAGCTTTTCTCCTGGGAGATGGGAATATCCTATCTCTGACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGAGCTTTTCTCCTGGGAGATGGGAATATCCTATCTCTGACACTT  100

seq1  TCCATCAAATCTTTCACTGATTCATCACTTTGTCTGCTCCTCAATTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCAAATCTTTCACTGATTCATCACTTTGTCTGCTCCTCAATTTTAT  150

seq1  GTGATTGATTGGGATTTAAGGAGAATATTAAATGATACTGGCCAGAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGATTGGGATTTAAGGAGAATATTAAATGATACTGGCCAGAGGTA  200

seq1  ATAAAGTTGTGTACTGAGGGCGTGTCTATATTCCTTCCAGATCACAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTGTGTACTGAGGGCGTGTCTATATTCCTTCCAGATCACAGAGA  250

seq1  CCTAGAAGATCTTTGGATGTGATCCCTTGTCAAACAGTCATGTTGCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGATCTTTGGATGTGATCCCTTGTCAAACAGTCATGTTGCTTGA  300

seq1  TTCAAATTCTTCTACAAGATTTTCTTTATCATGTACAATTCTTTATTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTCTTCTACAAGATTTTCTTTATCATGTACAATTCTTTATTCAG  350

seq1  TATCAAATCATTTCTTTATTCAGTTGAGCTGTAAGTGGGAGTGTATACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATCATTTCTTTATTCAGTTGAGCTGTAAGTGGGAGTGTATACAT  400

seq1  GTGTGTATGTATTCACTTACAGCTCCTTCAGAAGTTTATTTTCTTAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTATTCACTTACAGCTCCTTCAGAAGTTTATTTTCTTAAATA  450

seq1  GGAATGGGGAGTAGAGAGGTCACAAAGGAGGAAATGAGATGGCAGTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGGGAGTAGAGAGGTCACAAAGGAGGAAATGAGATGGCAGTGGTG  500

seq1  GTACATGGCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGGCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCT  550

seq1  GAGTATAAGGACATCCAAAGCTATACTGAGAAACCTTGTCTCAAAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATAAGGACATCCAAAGCTATACTGAGAAACCTTGTCTCAAAGAAAC  600

seq1  AAAAAACAAAAAAAAGGAAGGACTGTGAGGAGTGCA-GGTAAAACTAAAA  649
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAAACAAAAAAAAGGAAGGACTGTGAGGAGTGCAGGGTAAAACTAAAA  650

seq1  ATGTCCAA-TTGAGGAGTTGTATGAAAACCTAATAAAACAGTAGC-TTTC  697
      |||||||| ||||||||||||||| |||||||||||||||||||| ||||
seq2  ATGTCCAATTTGAGGAGTTGTATGTAAACCTAATAAAACAGTAGCTTTTC  700

seq1  AATATAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  738
      ||||||||| ||||||||||||| |||||||||||||||||
seq2  AATATAAAT-TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGT  740