BAC Information

Click to search

BAC

Clone NameB6Ng01-153A05
Chromosome7 (Build37)
Map Location 60,313,393 - 60,314,597
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620782, LOC100040692
Downstream geneGm1865, LOC100040718, LOC668789
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153A05.bB6Ng01-153A05.g
ACCDH948443DH948444
length1,2091,129
definitionDH948443|Mus musculus domesticus DNA, BAC clone: B6Ng01-153A05, 5' end.DH948444|Mus musculus domesticus DNA, BAC clone: B6Ng01-153A05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctgttttttattagtgctagtgcaaaaattcttaaacattgtt
tattattatgcataagtataataatacttccagcaatggactcacactct
acatagtctaacatacctgattttactatacagggaaataagtaagctat
ttctttaagctgccctgtttttacttctaaagaaggaaattgggcagggg
tatgcagctgtctgacattagagatgaatacagtgaaatattatgaattc
atctctgacactaatgcctccaggccatcaaggacaagagtgaaggatga
tcaaacagtggaatttaagaggagcagatgaaatctccaactaaaagaca
aaaagagataacagcaaaacatatcatcagaagtcaagactctcctcctt
gtgtccaagttaaggacctatataccaagaaagaaactatactacaaagc
acacagagaactgcaccacttgagaatttctttgtgggtgatgctagctg
ctttgacctgtgcagtaagtatctctgagcacatgaattgaccttatctt
ccccattctcctctgtttccctgttttcatatgttgattgcatggatcca
ggtattgttaccttcagtaattactgtccttattacagcatcttggaact
ataatataccattcatctaaagaagtggcagagcttaatttttcctattt
gcatcaaacatcataatattttttccattaaaggcaaatattgacttatt
gacttgaaatatttctcttttcaagtgattcttaagattttctggtgaat
ataaatattcaatcaatactactgagcacagtttggatccccattctcag
tggcagactactacttacaatgccttcactatttaatattcatttattat
atttataattagtttgcttttggatactcatatatcaattgacaatcaga
tttttttatataattccaatttaaaaaaaacttcttgaatatcctagata
tcactggatttatcttatattttaagttttataaaaggggagatttcaga
aaaccatctaaatggtggtggactaagaatattttctgggctatttttga
gaagaaactcctagaaaacaaagagatatagccttgggacaccagtttgc
ttcaaacaaccagaaatctatttttaattaggctttggctccttcccgga
ataggatag
gaattctcccccgaggaataccgaatggctgagaagcacgtgaaaaaatg
ttcaacatccttaatcctcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaatccaggtgacagc
agatgctggtgaggatgttgagaaagtggaacactcctccattgttggtg
ggattgcaagcttgtacaaacactatgaaaatcaatctggtggtttctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
ataaatacagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaaaccagat
gcccctcaaaagaggaatggttacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaatttttggcaaa
tggttggacttggagggcattatcctgagtgaggtaacacaatcacaaaa
gaactcaaatgatatgtactcactgataagtggatattagcccagaaact
tagtatagcgagatataaggtacaatttgcaaaacacatgaaactgaaga
agaacgaagaccaaagtatggacccttttgccccttcttagaattggaaa
caatcacttatgaaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatctcataatta
gcctccaaacgatgacaccattgcatacacttgcagcttttgctgcaagg
aatatgatatagtgtctcgatcttacagcacaaggctggtgagatggctc
agtggctaagacacccgactgctctttcaatggtccagagttcaattcct
agcaacacttggtggcttactaccatctttaatgaaatctgactcccttt
tctggagtgttgaagacagcgaggggacttactataataaaataataatc
tttcaaaaaagtctttactttgaataacattaagccaactggggtggtta
tctaaagcctaatgtaattgtgaaaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_60313393_60314597
seq2: B6Ng01-153A05.b_41_1249

seq1  GAATTCCCTGTTTTTTATTAGTGCTAGTGCAAAAATTCTTAAACATTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTTTTTTATTAGTGCTAGTGCAAAAATTCTTAAACATTGTT  50

seq1  TATTATTATGCATAAGTATAATAATACTTCCAGCAATGGACTCACACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATGCATAAGTATAATAATACTTCCAGCAATGGACTCACACTCT  100

seq1  ACATAGTCTAACATACCTGATTTTACTATACAGGGAAATAAGTAAGCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGTCTAACATACCTGATTTTACTATACAGGGAAATAAGTAAGCTAT  150

seq1  TTCTTTAAGCTGCCCTGTTTTTACTTCTAAAGAAGGAAATTGGGCAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAAGCTGCCCTGTTTTTACTTCTAAAGAAGGAAATTGGGCAGGGG  200

seq1  TATGCAGCTGTCTGACATTAGAGATGAATACAGTGAAATATTATGAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGCTGTCTGACATTAGAGATGAATACAGTGAAATATTATGAATTC  250

seq1  ATCTCTGACACTAATGCCTCCAGGCCATCAAGGACAAGAGTGAAGGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGACACTAATGCCTCCAGGCCATCAAGGACAAGAGTGAAGGATGA  300

seq1  TCAAACAGTGGAATTTAAGAGGAGCAGATGAAATCTCCAACTAAAAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGTGGAATTTAAGAGGAGCAGATGAAATCTCCAACTAAAAGACA  350

seq1  AAAAGAGATAACAGCAAAACATATCATCAGAAGTCAAGACTCTCCTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGATAACAGCAAAACATATCATCAGAAGTCAAGACTCTCCTCCTT  400

seq1  GTGTCCAAGTTAAGGACCTATATACCAAGAAAGAAACTATACTACAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCAAGTTAAGGACCTATATACCAAGAAAGAAACTATACTACAAAGC  450

seq1  ACACAGAGAACTGCACCACTTGAGAATTTCTTTGTGGGTGATGCTAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGAACTGCACCACTTGAGAATTTCTTTGTGGGTGATGCTAGCTG  500

seq1  CTTTGACCTGTGCAGTAAGTATCTCTGAGCACATGAATTGACCTTATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCTGTGCAGTAAGTATCTCTGAGCACATGAATTGACCTTATCTT  550

seq1  CCCCATTCTCCTCTGTTTCCCTGTTTTCATATGTTGATTGCATGGATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTCTCCTCTGTTTCCCTGTTTTCATATGTTGATTGCATGGATCCA  600

seq1  GGTATTGTTACCTTCAGTAATTACTGTCCTTATTACAGCATCTTGGAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGTTACCTTCAGTAATTACTGTCCTTATTACAGCATCTTGGAACT  650

seq1  ATAATATACCATTCATCTAAAGAAGTGGCAGAGCTTAATTTTTCCTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATACCATTCATCTAAAGAAGTGGCAGAGCTTAATTTTTCCTATTT  700

seq1  GCATCAAACATCATAATATTTTTTCCATTAAAGGCAAATATTGACTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAACATCATAATATTTTTTCCATTAAAGGCAAATATTGACTTATT  750

seq1  GACTTGAAATATTTCTCTTTTCAAGTGATTCTTAAGATTTTCTGGTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAAATATTTCTCTTTTCAAGTGATTCTTAAGATTTTCTGGTGAAT  800

seq1  ATAAATATTCAATCAATACTACTGAGCACAGTTTGGATCCCCATTCTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTCAATCAATACTACTGAGCACAGTTTGGATCCCCATTCTCAG  850

seq1  TGGCAGACTACTACTTACAATGCCTTCACTATTTTAATA-TCATTTATTA  899
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  TGGCAGACTACTACTTACAATGCCTTCACTA-TTTAATATTCATTTATTA  899

seq1  TATTTATAATTAGTTTGCTTTTGGATACTCATATATCAATTGACAATCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATTAGTTTGCTTTTGGATACTCATATATCAATTGACAATCAG  949

seq1  A-TTTTTTATATAATTCCAAATTTAAAAAAAAAACTCTTGAATATCCTAG  998
      | ||||||||||||||||||  || ||||||||  |||||||||||||||
seq2  ATTTTTTTATATAATTCCAA--TTTAAAAAAAACTTCTTGAATATCCTAG  997

seq1  ATATCACTGGATATA-CTTATA-TTTAAG-TATATAAAAAGGGAGATGTC  1045
      |||||||||||| || |||||| |||||| | ||||||| ||||||| ||
seq2  ATATCACTGGATTTATCTTATATTTTAAGTTTTATAAAAGGGGAGATTTC  1047

seq1  AGAAAACCATCTAAAAATGGT-GTGGACTAAGGATA-TTTCTGGGCTATT  1093
      ||||||||||||  ||||||| |||||||||| ||| |||||||||||||
seq2  AGAAAACCATCT--AAATGGTGGTGGACTAAGAATATTTTCTGGGCTATT  1095

seq1  TTTGAGA--GAACT-CTAAGAAACAAAGAGAT-GAGCCTTGGGACACCAG  1139
      |||||||   |||| |||  ||||||||||||  ||||||||||||||||
seq2  TTTGAGAAGAAACTCCTAGAAAACAAAGAGATATAGCCTTGGGACACCAG  1145

seq1  -TTGCTTCAA--AACCACAGAATTATTTTTAGATTATGGCTTTGTGCTCT  1186
       |||||||||  ||||| | |  |||||||| |||| ||||||| |||| 
seq2  TTTGCTTCAAACAACCAGAAATCTATTTTTA-ATTA-GGCTTTG-GCTCC  1192

seq1  TCCCAGGAATAGAGGATAG  1205
      | || |||||  |||||||
seq2  TTCCCGGAAT--AGGATAG  1209