BAC Information

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BAC

Clone NameB6Ng01-153H07
Chromosome7 (Build37)
Map Location 140,132,120 - 140,264,647
singlet/doubletdoublet
Overlap geneZranb1, Ctbp2
Upstream geneGpr26, Cpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik
Downstream geneLOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153H07.bB6Ng01-153H07.g
ACCDH948764DH948765
length1,131931
definitionDH948764|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H07, 5' end.DH948765|Mus musculus domesticus DNA, BAC clone: B6Ng01-153H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,263,515 - 140,264,647)(140,132,120 - 140,133,057)
sequence
gaattctggaagaatgcatcgggacaagtctgcatctattaacttaattt
tgggttcacatcttactcttgcgctctcctccccccacctctgccaaagg
gtcatgtcgaaacaggcaagtaaaggagagagctaaagtttcagagaata
ataatgttattatacctttgtctgtcttagcattatccgctgtccttccc
cctcccccacccacagtcaagttgaagaaacacaaaaggctttggatttt
ctcacatgacaggagcctgagaatttcttcttttacactgagttaattgc
cacagtaggggatggacacacatcctagaactctgttaatatttacatag
tctgtctatttaagcttagtttaattttaaaatctgatacgctggatttt
atgtgttactggccctttaccctacacacacacacacacacacacacaca
cacacacacacacactgtctctcggtgtgtgtatgctcatacatgtttgt
gcaggcacggacacatgcttgtgtgtgtgccaaaggacgatcctcgccac
tatccaccctcttctgtttttgagagagtctcactctggaacttcccatg
taggcttggctggctggtcagcaggcccgtgcgtggatcttgtctctgcc
tccccagtgctaggattacagacacatgccaccatgcccttctgtttcca
cgtggtttgggggactcaaattctggtcctctggctttgcaaggcaacca
gaacacctcactagcttcttacttactagggtacctccccatcccttccc
ttccttttttatgcacatccccagtagcttacctgaaaagccagtgcagc
agcctccaggcaaatgttagggaacgtgttaaggctcccttcacacagta
caagtgacttgtttgatgttgagcctcggtaaccaaagacatgcatgtat
agcttttgacattctactctagattaattaggtgtctaatcattaataaa
taccgttttcttttgcggctgctgctgctaaacccgaactctctgctaat
aaaccattgtcagttcaaactgagcaatggtggtttggtcttttatgatc
tgcaagggaaaaggaataaaatcttttataa
gaattcctgaaatgactagaagaagatagatgaaaagaaatgtcacttac
tattgttacatgctaaaattgttaataactatcttctaggtatttttcat
tctcaccagtagagtgatagtttctgtttaattaagagtgggaaacctgt
cagaattcttttattatgttccttccataattaatgtattcttaccagat
taaaatagcaaatcttaatggggctggagagaacactgagtggttaagat
aatctgcttttgcagaggacaggagttgtgttcccagtatccacatcagc
ttactcagagggtgatgtaattctagtttcggggtggtggtggggtggca
gggttcaatacttctgtccccaaaggcaccagcactcaacatgtacacac
acacaattaaaatatttgaaagaaaagacagctctatttggaatgaagat
aggtattctagctgtaatatgggtaattgcctcagttaaataatagcata
gtgctggtgtggccggtgtcattctgatagctgttacttaacttgagttt
attttattttcacacactcttgggaggatttagcaggttttgttcagttc
agtgtttgataacaggtgactctgcaatagttaacatgagttctatagag
gatgtatgttgtattttctgaagatatttaattgactggaactatagctc
agagtacttgccagtacatgcaaagctgtgggttttattccttagtacac
ttccaaaagttaatgattgtaaaaaatttgtacttatgcccttcatgtac
tgctaatccaaataatcagcttataggtgtcaaagcagtcatgttgcgca
gattattaatacagaatctggtgtgaatcctttaggtagcaagaatgtaa
ccaacattactgaactgtttgttcttcttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_140263515_140264647
seq2: B6Ng01-153H07.b_46_1176 (reverse)

seq1  TTATAAAGAATTTACTTCCATTTTCCCTTGACAGATCATAAAAG-CCAAA  49
      |||||||  ||||  |||| |||||||||| ||||||||||||| |||||
seq2  TTATAAAAGATTTTATTCC-TTTTCCCTTG-CAGATCATAAAAGACCAAA  48

seq1  ACA-CAATGCTCAGTTTGAAACTGACAAGTGTATA-TAGCAGGAGAG-TC  96
       || || ||||||||||| |||||||||  || || ||||| ||||| ||
seq2  CCACCATTGCTCAGTTTG-AACTGACAATGGTTTATTAGCA-GAGAGTTC  96

seq1  GGGATTAGCAGCAGACAGCCGCAAAAGAAAACGGTATTTA-TAATGATTA  145
      ||| |||||||||| ||||||||||||||||||||||||| |||||||||
seq2  GGGTTTAGCAGCAG-CAGCCGCAAAAGAAAACGGTATTTATTAATGATTA  145

seq1  GACACCTAATTAATTCTAAGAGTAGAATGTCAAAAGCTATACATGCATGT  195
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  GACACCTAATTAA-TCT-AGAGTAGAATGTCAAAAGCTATACATGCATGT  193

seq1  CTTTGGTTACCGAGGCTCAACATCAAACAAGTCACTTGTACTGTGTGAAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTTACCGAGGCTCAACATCAAACAAGTCACTTGTACTGTGTGAAG  243

seq1  GGAGCCTTAACACGTTCCCTAACATTTGCCTGGAGGCTGCTGCACTGGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTAACACGTTCCCTAACATTTGCCTGGAGGCTGCTGCACTGGCT  293

seq1  TTTCAGGTAAGCTACTGGGGATGTGCATAAAAAAGGAAGGGAAGGGATGG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGTAAGCTACTGGGGATGTGCATAAAAAAGGAAGGGAAGGGATGG  343

seq1  GGAGGTACCCTAGTAAGTAAGAAGCTAGTGAGGTGTTCTGGTTGCCTTGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTACCCTAGTAAGTAAGAAGCTAGTGAGGTGTTCTGGTTGCCTTGC  393

seq1  AAAGCCAGAGGACCAGAATTTGAGTCCCCCAAACCACGTGGAAACAGAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGAGGACCAGAATTTGAGTCCCCCAAACCACGTGGAAACAGAAG  443

seq1  GGCATGGTGGCATGTGTCTGTAATCCTAGCACTGGGGAGGCAGAGACAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGTGGCATGTGTCTGTAATCCTAGCACTGGGGAGGCAGAGACAAG  493

seq1  ATCCACGCACGGGCCTGCTGACCAGCCAGCCAAGCCTACATGGGAAGTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACGCACGGGCCTGCTGACCAGCCAGCCAAGCCTACATGGGAAGTTC  543

seq1  CAGAGTGAGACTCTCTCAAAAACAGAAGAGGGTGGATAGTGGCGAGGATC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAGACTCTCTCAAAAACAGAAGAGGGTGGATAGTGGCGAGGATC  593

seq1  GTCCTTTGGCACACACACAAGCATGTGTCCGTGCCTGCACAAACATGTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTGGCACACACACAAGCATGTGTCCGTGCCTGCACAAACATGTAT  643

seq1  GAGCATACACACACCGAGAGACAGTGTGTGTGTGTGTGTGTGTGTGTGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATACACACACCGAGAGACAGTGTGTGTGTGTGTGTGTGTGTGTGTG  693

seq1  TGTGTGTGTGTGTGTAGGGTAAAGGGCCAGTAACACATAAAATCCAGCGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTAGGGTAAAGGGCCAGTAACACATAAAATCCAGCGT  743

seq1  ATCAGATTTTAAAATTAAACTAAGCTTAAATAGACAGACTATGTAAATAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATTTTAAAATTAAACTAAGCTTAAATAGACAGACTATGTAAATAT  793

seq1  TAACAGAGTTCTAGGATGTGTGTCCATCCCCTACTGTGGCAATTAACTCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAGTTCTAGGATGTGTGTCCATCCCCTACTGTGGCAATTAACTCA  843

seq1  GTGTAAAAGAAGAAATTCTCAGGCTCCTGTCATGTGAGAAAATCCAAAGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAAGAAGAAATTCTCAGGCTCCTGTCATGTGAGAAAATCCAAAGC  893

seq1  CTTTTGTGTTTCTTCAACTTGACTGTGGGTGGGGGAGGGGGAAGGACAGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGTTTCTTCAACTTGACTGTGGGTGGGGGAGGGGGAAGGACAGC  943

seq1  GGATAATGCTAAGACAGACAAAGGTATAATAACATTATTATTCTCTGAAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATGCTAAGACAGACAAAGGTATAATAACATTATTATTCTCTGAAA  993

seq1  CTTTAGCTCTCTCCTTTACTTGCCTGTTTCGACATGACCCTTTGGCAGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTCTCTCCTTTACTTGCCTGTTTCGACATGACCCTTTGGCAGAG  1043

seq1  GTGGGGGGAGGAGAGCGCAAGAGTAAGATGTGAACCCAAAATTAAGTTAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGGGAGGAGAGCGCAAGAGTAAGATGTGAACCCAAAATTAAGTTAA  1093

seq1  TAGATGCAGACTTGTCCCGATGCATTCTTCCAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCAGACTTGTCCCGATGCATTCTTCCAGAATTC  1131

seq1: chr7_140132120_140133057
seq2: B6Ng01-153H07.g_69_999

seq1  GAATTCCTGAAATGACTAGAAGAAGATAGATGAAAAGAAATGTCACTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAATGACTAGAAGAAGATAGATGAAAAGAAATGTCACTTAC  50

seq1  TATTGTTACATGCTAAAATTGTTAATAACTATCTTCTAGGTATTTTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTACATGCTAAAATTGTTAATAACTATCTTCTAGGTATTTTTCAT  100

seq1  TCTCACCAGTAGAGTGATAGTTTCTGTTTAATTAAGAGTGGGAAACCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAGTAGAGTGATAGTTTCTGTTTAATTAAGAGTGGGAAACCTGT  150

seq1  CAGAATTCTTTTATTATGTTCCTTCCATAATTAATGTATTCTTACCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTCTTTTATTATGTTCCTTCCATAATTAATGTATTCTTACCAGAT  200

seq1  TAAAATAGCAAATCTTAATGGGGCTGGAGAGAACACTGAGTGGTTAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGCAAATCTTAATGGGGCTGGAGAGAACACTGAGTGGTTAAGAT  250

seq1  AATCTGCTTTTGCAGAGGACAGGAGTTGTGTTCCCAGTATCCACATCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGCTTTTGCAGAGGACAGGAGTTGTGTTCCCAGTATCCACATCAGC  300

seq1  TTACTCAGAGGGTGATGTAATTCTAGTTTCGGGGTGGTGGTGGGGTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAGAGGGTGATGTAATTCTAGTTTCGGGGTGGTGGTGGGGTGGCA  350

seq1  GGGTTCAATACTTCTGTCCCCAAAGGCACCAGCACTCAACATGTACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCAATACTTCTGTCCCCAAAGGCACCAGCACTCAACATGTACACAC  400

seq1  ACACAATTAAAATATTTGAAAGAAAAGACAGCTCTATTTGGAATGAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTAAAATATTTGAAAGAAAAGACAGCTCTATTTGGAATGAAGAT  450

seq1  AGGTATTCTAGCTGTAATATGGGTAATTGCCTCAGTTAAATAATAGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTCTAGCTGTAATATGGGTAATTGCCTCAGTTAAATAATAGCATA  500

seq1  GTGCTGGTGTGGCCGGTGTCATTCTGATAGCTGTTACTTAACTTGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGTGTGGCCGGTGTCATTCTGATAGCTGTTACTTAACTTGAGTTT  550

seq1  ATTTTATTTTCACACACTCTTGGGAGGATTTAGCAGG-TTTGTTCAGTTC  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATTTTATTTTCACACACTCTTGGGAGGATTTAGCAGGTTTTGTTCAGTTC  600

seq1  AGTGTTTGATAACAGGTGACTCTGCAATAGTTAACATGAGTTCTATAGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGATAACAGGTGACTCTGCAATAGTTAACATGAGTTCTATAGAG  650

seq1  GATGTATGTTGTATTTTCTGAAGATATTTAATTGACTGGAACTATAGCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATGTTGTATTTTCTGAAGATATTTAATTGACTGGAACTATAGCTC  700

seq1  AGAGTACTTGCCAGTACATGCAAAGCTGTGGGTTTTATTCCTTAGTACCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGAGTACTTGCCAGTACATGCAAAGCTGTGGGTTTTATTCCTTAGTA-CA  749

seq1  CTACCAAAAGTTAATGATTGTAAAAAATTTGTACTTATGCCCTTTATGTA  799
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTCCAAAAGTTAATGATTGTAAAAAATTTGTACTTATGCCCTTCATGTA  799

seq1  CTGCTAATCCAAATAATCAGCTCATAGGTTGTCACAGCAGTTCAGGTTGC  849
      |||||||||||||||||||||| ||||| ||||| ||||| ||| |||||
seq2  CTGCTAATCCAAATAATCAGCTTATAGG-TGTCAAAGCAG-TCATGTTGC  847

seq1  GCAGATTTTGAATACAGAAGTCTGGTGTAGAATACTTTCAGGTAGCAAGG  899
      ||||||| | ||||||||| |||||||| |||| |||| ||||||||| |
seq2  GCAGATTATTAATACAGAA-TCTGGTGT-GAATCCTTT-AGGTAGCAA-G  893

seq1  AATGGAACAAACACTTACTGAACAGTTTGTTATTCTTAG  938
      |||| ||| |||| ||||||||| ||||||| ||||| |
seq2  AATGTAACCAACA-TTACTGAACTGTTTGTTCTTCTTGG  931