BAC Information

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BAC

Clone NameB6Ng01-153K05
Chromosome7 (Build37)
Map Location 10,255,510 - 10,402,118
singlet/doubletdoublet
Overlap geneLOC100042139, LOC100042894, Vmn2r47
Upstream geneLOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126
Downstream gene2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153K05.bB6Ng01-153K05.g
ACCDH948896DH948897
length846199
definitionDH948896|Mus musculus domesticus DNA, BAC clone: B6Ng01-153K05, 5' end.DH948897|Mus musculus domesticus DNA, BAC clone: B6Ng01-153K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,401,273 - 10,402,118)(10,255,510 - 10,255,708)
sequence
gaattctgtcaaatgtaaagttggtacatacccaccaaatattgggttat
agtgcatgtgtctagttttagaatcactctcactggttgctctagtgata
tcaggaagtatcatatctactgaacttccctacagtgtccataaaatctt
gcactcattcactttcttcattttctctcagagaactaaactctctaatt
attacaattttattctttattttgctttcatggagatggccctctggtaa
cagccaaaaaatgttgataaggcagttgaatccaccactttgtgtagaaa
aatgagatctaggaagacagggttacacataaaaaccatctaccaaatca
aataatcaatgagaaacacagactaactaaataatcagcaaagatgaaat
cagaacatattttctgacttccagtaagagcacacacataagaaaatact
tacttttttcatctgttcttcaatctactggccaatagtctaaggaggaa
atgttccttttctgctgtcaaataaaaatatattatatccaacaatgatc
agaagcccagggactctctggatgaattgggaatattgggaagaagctga
ggaggagggtgaccagcattctcaacaaacctggacaagcaagatctctc
agacattgagcctctaaccagagatcatacactagctgatgtgaagcccc
caacaaatatgcagcataagactgcctggtctagcatcagtgggagagac
acacctaaccccagagagacttaagtctccagggattgggaagggctggg
cgttggggaggtagggatatcatcttggagatgggggaggagtttt
aaactcttctcagttatacacatcagatatgacgtcatcaccaataactt
ttctattgtgcatccccacgctaaaagaaatttggagatgcataacggaa
ttcagcccacaaaatcatttcggtgtggcactgaggatgttcttcagaag
gaaagtctccagcagcagcttccagaggggtggggtggggggaagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_10401273_10402118
seq2: B6Ng01-153K05.b_45_890 (reverse)

seq1  ACAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAACGCCCA  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCTCCCCCATCTCCAAGATGATATCCCTACCTCCCCAACGCCCA  50

seq1  GCCCTTCCCAATCCCTGGAGACTTAAGTCTCTCTGGGGTTAGGTGTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCCCAATCCCTGGAGACTTAAGTCTCTCTGGGGTTAGGTGTGTCT  100

seq1  CTCCCACTGATGCTAGACCAGGCAGTCTTATGCTGCATATTTGTTGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACTGATGCTAGACCAGGCAGTCTTATGCTGCATATTTGTTGGGGG  150

seq1  CTTCACATCAGCTAGTGTATGATCTCTGGTTAGAGGCTCAATGTCTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACATCAGCTAGTGTATGATCTCTGGTTAGAGGCTCAATGTCTGAGA  200

seq1  GATCTTGCTTGTCCAGGTTTGTTGAGAATGCTGGTCACCCTCCTCCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGCTTGTCCAGGTTTGTTGAGAATGCTGGTCACCCTCCTCCTCAG  250

seq1  CTTCTTCCCAATATTCCCAATTCATCCAGAGAGTCCCTGGGCTTCTGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCCAATATTCCCAATTCATCCAGAGAGTCCCTGGGCTTCTGATC  300

seq1  ATTGTTGGATATAATATATTTTTATTTGACAGCAGAAAAGGAACATTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGATATAATATATTTTTATTTGACAGCAGAAAAGGAACATTTCC  350

seq1  TCCTTAGACTATTGGCCAGTAGATTGAAGAACAGATGAAAAAAGTAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGACTATTGGCCAGTAGATTGAAGAACAGATGAAAAAAGTAAGTA  400

seq1  TTTTCTTATGTGTGTGCTCTTACTGGAAGTCAGAAAATATGTTCTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTATGTGTGTGCTCTTACTGGAAGTCAGAAAATATGTTCTGATTT  450

seq1  CATCTTTGCTGATTATTTAGTTAGTCTGTGTTTCTCATTGATTATTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTGCTGATTATTTAGTTAGTCTGTGTTTCTCATTGATTATTTGAT  500

seq1  TTGGTAGATGGTTTTTATGTGTAACCCTGTCTTCCTAGATCTCATTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGATGGTTTTTATGTGTAACCCTGTCTTCCTAGATCTCATTTTTC  550

seq1  TACACAAAGTGGTGGATTCAACTGCCTTATCAACATTTTTTGGCTGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAGTGGTGGATTCAACTGCCTTATCAACATTTTTTGGCTGTTAC  600

seq1  CAGAGGGCCATCTCCATGAAAGCAAAATAAAGAATAAAATTGTAATAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGCCATCTCCATGAAAGCAAAATAAAGAATAAAATTGTAATAATT  650

seq1  AGAGAGTTTAGTTCTCTGAGAGAAAATGAAGAAAGTGAATGAGTGCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTTAGTTCTCTGAGAGAAAATGAAGAAAGTGAATGAGTGCAAGA  700

seq1  TTTTATGGACACTGTAGGGAAGTTCAGTAGATATGATACTTCCTGATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGACACTGTAGGGAAGTTCAGTAGATATGATACTTCCTGATATC  750

seq1  ACTAGAGCAACCAGTGAGAGTGATTCTAAAACTAGACACATGCACTATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGCAACCAGTGAGAGTGATTCTAAAACTAGACACATGCACTATAA  800

seq1  CCCAATATTTGGTGGGTATGTACCAACTTTACATTTGACAGAATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATATTTGGTGGGTATGTACCAACTTTACATTTGACAGAATTC  846

seq1: chr7_10255510_10255708
seq2: B6Ng01-153K05.g_78_276

seq1  AAACTCTTCTCAGTTATACACATCAGATATGACGTCATCACCAATAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCTCAGTTATACACATCAGATATGACGTCATCACCAATAACTT  50

seq1  TTCTATTGTGCATCCCCACGCTAAAAGAAATTTGGAGATGCATAACGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTGTGCATCCCCACGCTAAAAGAAATTTGGAGATGCATAACGGAA  100

seq1  TTCAGCCCACAAAATCATTTCGGTGTGGCACTGAGGATGTTCTTCAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCACAAAATCATTTCGGTGTGGCACTGAGGATGTTCTTCAGAAG  150

seq1  GAAAGTCTCCAGCAGCAGCTTCCAGAGGGGTGGGGTGGGGGGAAGGGAA  199
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTCCAGCAGCAGCTTCCAGAGGGGTGGGGTGGGGGGAAGGGAA  199