BAC Information

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BAC

Clone NameB6Ng01-153O11
Chromosome7 (Build37)
Map Location 59,873,620 - 59,874,625
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865, LOC100040718
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153O11.bB6Ng01-153O11.g
ACCDH949088DH949089
length1,1761,014
definitionDH949088|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O11, 5' end.DH949089|Mus musculus domesticus DNA, BAC clone: B6Ng01-153O11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccactccatggagcctccagactctccagggttaggtgcatct
tctctcactgaggccagaccaggcagtcctttgctttatatatgtcagga
gccttgtatcagctagtgtatgctgcctgtttggtggctctgtgtctgag
agatttcaggggtctgggttagttgagattgcttttcttcacaggagtag
cccttctcagcttcttccagcctttccccaacttaaccacaggggtccct
ggcttctctccataggttgggtgctagtatctgcatctgactttttctgc
tgcttgttaggcctttcagagagcagccatgctaggctcctctctgcaag
cacaccacaggatcagtaatagtgtcaggtcctggagccaccccttgagc
tcaagcctgtctctggacttcctttctattgtgcccttctccattttttg
ttcctgtagttacttcagacagaaacaattctgggtcaaagcttttgacc
atgggatggtaagcccatccatctaattgatgtcctgtccctcctctgga
ggtggactctgtaaattcctcctctcccctggagagcacttcatccaagg
tccctcctttatgtcctaagagtctctaacctcccaggtccgtgataatt
gtagagggtcccccctaccccctacctctcaaggttgcctgtttccattc
tttctgctggccttcagggcttcatttctgctccctcccaaatacatgac
catgttccccttttgccctctctgtcccttctcccacccaagttcctccc
tcactctgcctccccattattgctttcttctccctcccaagtgggattga
ggcatcctttcttcagtcctttgtcttttttgacctctgagttctgtggg
ctctgtcctgggtactctgactttttggctacaccactataattaagtac
atacactgcatggccctcggaatctgaaaacctcactcgggagatatttt
tagtaaaatttacactccaatttttacaaaatttaaaaggcgagtcccat
gaagataataatattatggaaagagaaagcggaccaagctcctgcaatgt
aggctgaagaccaatgaagcagcatctcggtggagagtacgagttatacg
atcgtccaataggctgaacgtttaag
gaattcaacaaaattgtaagcagctgttattcaatacacttaaaatttat
gaaaagggagatgtaataaaaaggcattaaaagaaaaatgaaagtgttgg
tctgaaaaaaatgcaatatttatagcaaaaaaataaatgatctaaaaaat
aagtgaaaatatgaaaacaaagatgtaaataggatgttgtgttaaagcat
aaaattaatattctatcaacaaaaggaattaaaaagaaaccaaacagggc
tgaagagatgcctcagcagttagaatttctacttggtctttcagaggatt
aaaatttggttcctatcaacaacatagcaagtcagaaccatcagcaacta
gaagggctacagtgccctctttagcctctgcaaactataggcacacacat
tgtgtacacatatacatgcacacaaaacacttaagacataatttttaaat
attatttgtaataaggagaaacaaaaatagggaaatatttatgaattgac
ttcagactagttcaatctgagaatgaaagttaagaaaaaaagtaatagat
ctcattaataaaatgttgatgttaatgtgtacttatattactaatgaatg
gcacaggctaggctacttcactgtaattaatagtctttctatatagaatg
agaaactactaggagtcaaattaagaaataaagggatacctttcaataac
aatttacaaggtcagggatgctatgaattgtggacatagaagggagttag
acattaggcacaagactgcaggcatcagcacacagtggaagagatgggag
agctgtaaaatctttttcagttgaagacttggggatactttacatgggaa
atgttcccccaccatctacaaaagatgtatctcatatgacccatgacctt
tcctcccactgatgctgacaaagccatcctgtagaacatatgtagttgga
gccatggttacggcttttgcgatggcttaatcccttggaagtcggggggg
gattcatttagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59873620_59874625
seq2: B6Ng01-153O11.g_72_1085 (reverse)

seq1  CAACTA----GATCCCCCCCCGAACTCCCAGGGACTAAGCCATCGACAAA  46
      ||||||     ||||||||||||  ||| ||||| ||||||||||  |||
seq2  CAACTAAATGAATCCCCCCCCGACTTCCAAGGGATTAAGCCATCGCAAAA  50

seq1  GGCGTACACATGGCTCCAGCTACATATGTACTACAGGATGGCCTTGTCAG  96
      | ||||  |||||||||| |||||||||| |||||||||||| |||||| 
seq2  GCCGTAACCATGGCTCCAACTACATATGTTCTACAGGATGGCTTTGTCA-  99

seq1  GCATCAGTGGGAGGAAAGGTCCTTGGTCCTATGAGATACATCTTTTGTAG  146
      ||||||||||||||||||||| | |||| |||||||||||||||||||||
seq2  GCATCAGTGGGAGGAAAGGTCATGGGTCATATGAGATACATCTTTTGTAG  149

seq1  ACTGTTGGGGAACATTTCCCATGTAATGTAT-CCCAAGTCTTC-ACTGAA  194
      |  || |||||||||||||||||||| |||| ||||||||||| ||||||
seq2  ATGGTGGGGGAACATTTCCCATGTAAAGTATCCCCAAGTCTTCAACTGAA  199

seq1  AAAGGTTCTACAGCTCT-CCATCTCTTCCACTGTGTGCTGATGCCTGCAG  243
      |||| || ||||||||| ||||||||||||||||||||||||||||||||
seq2  AAAGATTTTACAGCTCTCCCATCTCTTCCACTGTGTGCTGATGCCTGCAG  249

seq1  TCTTGTGCCTAATGTCTAACTTCCTTCTATGTCCACAATTCATAGCATCC  293
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCTTGTGCCTAATGTCTAACTCCCTTCTATGTCCACAATTCATAGCATCC  299

seq1  CTGACCTTGT-AATTGTTATTG-AAGGTATCCCTTTATTTCTTAATTTGA  341
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  CTGACCTTGTAAATTGTTATTGAAAGGTATCCCTTTATTTCTTAATTTGA  349

seq1  CTCCTAGTAGTTTCTCATTCTATATAGAAAGACTATTAATTACAGTGAAG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGTAGTTTCTCATTCTATATAGAAAGACTATTAATTACAGTGAAG  399

seq1  TAGCCTAGCCTGTGCCATTCATTAGTAATATAAGTACACATTAACATCAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAGCCTGTGCCATTCATTAGTAATATAAGTACACATTAACATCAA  449

seq1  CATTTTATTAATGAGATCTATTACTTTTTTTCTTAACTTTCATTCTCAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTAATGAGATCTATTACTTTTTTTCTTAACTTTCATTCTCAGA  499

seq1  TTGAACTAGTCTGAAGTCAATTCATAAATATTTCCCTATTTTTGTTTCTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTAGTCTGAAGTCAATTCATAAATATTTCCCTATTTTTGTTTCTC  549

seq1  CTTATTACAAATAATATTTAAAAATTATGTCTTAAGTGTTTTGTGTGCAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTACAAATAATATTTAAAAATTATGTCTTAAGTGTTTTGTGTGCAT  599

seq1  GTATATGTGTACACAATGTGTGTGCCTATAGTTTGCAGAGGCTAAAGAGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGTGTACACAATGTGTGTGCCTATAGTTTGCAGAGGCTAAAGAGG  649

seq1  GCACTGTAGCCCTTCTAGTTGCTGATGGTTCTGACTTGCTATGTTGTTGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTAGCCCTTCTAGTTGCTGATGGTTCTGACTTGCTATGTTGTTGA  699

seq1  TAGGAACCAAATTTTAATCCTCTGAAAGACCAAGTAGAAATTCTAACTGC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACCAAATTTTAATCCTCTGAAAGACCAAGTAGAAATTCTAACTGC  749

seq1  TGAGGCATCTCTTCAGCCCTGTTTGGTTTCTTTTTAATTCCTTTTGTTGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATCTCTTCAGCCCTGTTTGGTTTCTTTTTAATTCCTTTTGTTGA  799

seq1  TAGAATATTAATTTTATGCTTTAACACAACATCCTATTTACATCTTTGTT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTAATTTTATGCTTTAACACAACATCCTATTTACATCTTTGTT  849

seq1  TTCATATTTTCACTTATTTTTTAGATCATTTATTTTTTTGCTATAAATAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTTCACTTATTTTTTAGATCATTTATTTTTTTGCTATAAATAT  899

seq1  TGCATTTTTTTCAGACCAACACTTTCATTTTTCTTTTAATGCCTTTTTAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTTTTCAGACCAACACTTTCATTTTTCTTTTAATGCCTTTTTAT  949

seq1  TACATCTCCCTTTTCATAAATTTTAAGTGTATTGAATAACAGCTGCTTAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTCCCTTTTCATAAATTTTAAGTGTATTGAATAACAGCTGCTTAC  999

seq1  AATTTTGTTGAATTC  1006
      |||||||||||||||
seq2  AATTTTGTTGAATTC  1014