BAC Information

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BAC

Clone NameB6Ng01-154I19
Chromosome7 (Build37)
Map Location 134,271,830 - 134,470,820
singlet/doubletdoublet
Overlap geneSpn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal
Upstream geneXpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt
Downstream geneZfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154I19.bB6Ng01-154I19.g
ACCDH949565DH949566
length1,007243
definitionDH949565|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I19, 5' end.DH949566|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,271,830 - 134,272,832)(134,470,578 - 134,470,820)
sequence
gaattcactatgcagaccagactgggctcaagctcatagaaatctacctg
cctctgcctccagagtgttggacttaaagcatgctcatggcaggacccag
cctccagacattaaaaaaagtgagagtcttgatatgcacatagctcaagc
tgggttcatgcctcagcctcctgatttctgggcttacggggcaggctaac
cattatagcctacagaccccaaatgtcagcattctgactcaaggggcatt
tctgctggcacagcgcatagctgtatgcagtaaatgatataacttctcta
tttatccaccacaccgttattacagctgatcataaatggatcaccatagt
tcatgcctgtaattccagctactccagaggggcacttgagcccagcctgg
gccacagatggagatgacccagaacaaaacaacaaacaactagaaacctc
tttccaaccctgcagccctcattgttaggcctctaatcatctccagagag
tattttggaattcactcctgtgcttacacctctgggcagcaaccctgtat
tcggcagcctgggtgttgggctctctgtaaagacgatgcagcgcaacgtt
ggaaggctccctgctctgacaccctcacagccacacagcctggccttgga
actcagtcggggggctcgcttgctcagtgccctgagcatctgcagtcccc
agcactgcacatgccaggtatggtggcactcacctgtaatgccagcactc
aggaggtggaggcagggggatcagcaggttaaggtcacagactcgggaga
tggctctgtgtataaagagcactggctgtgcagactttgaggacctgagt
ctggaccacagcacccatgtgaaaaagttggggtgtggccatgctctcct
gtaacccttatgccttgggaagaagaggaagttgaagatacagggtcact
ggtgcttttcttggccactagcctcgcctccctggccccaaggctgacag
ctccaag
tgcatcccaggaggaaaaagagacccagggaaagggaagggtttttcggc
caggctttggaaggaggagcacagaacaactgtaaggtcttggggaagca
agatccagtggcctccaccactgggagatagccaaggaggctggtggatg
ctagctgatacaggctagctaataagtttataaagctgtctgagcatttt
tcatccctggagcaaaggtagggagaggaagagggagggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134271830_134272832
seq2: B6Ng01-154I19.b_44_1050

seq1  GAATTCACTATGCAGACCAGACTGGGCTCAAGCTCATAGAAATCTACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGCAGACCAGACTGGGCTCAAGCTCATAGAAATCTACCTG  50

seq1  CCTCTGCCTCCAGAGTGTTGGACTTAAAGCATGCTCATGGCAGGACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCAGAGTGTTGGACTTAAAGCATGCTCATGGCAGGACCCAG  100

seq1  CCTCCAGACATTAAAAAAAGTGAGAGTCTTGATATGCACATAGCTCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGACATTAAAAAAAGTGAGAGTCTTGATATGCACATAGCTCAAGC  150

seq1  TGGGTTCATGCCTCAGCCTCCTGATTTCTGGGCTTACGGGGCAGGCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCATGCCTCAGCCTCCTGATTTCTGGGCTTACGGGGCAGGCTAAC  200

seq1  CATTATAGCCTACAGACCCCAAATGTCAGCATTCTGACTCAAGGGGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAGCCTACAGACCCCAAATGTCAGCATTCTGACTCAAGGGGCATT  250

seq1  TCTGCTGGCACAGCGCATAGCTGTATGCAGTAAATGATATAACTTCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGCACAGCGCATAGCTGTATGCAGTAAATGATATAACTTCTCTA  300

seq1  TTTATCCACCACACCGTTATTACAGCTGATCATAAATGGATCACCATAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCACCACACCGTTATTACAGCTGATCATAAATGGATCACCATAGT  350

seq1  TCATGCCTGTAATTCCAGCTACTCCAGAGGGGCACTTGAGCCCAGCCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCTGTAATTCCAGCTACTCCAGAGGGGCACTTGAGCCCAGCCTGG  400

seq1  GCCACAGATGGAGATGACCCAGAACAAAACAACAAACAACTAGAAACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGATGGAGATGACCCAGAACAAAACAACAAACAACTAGAAACCTC  450

seq1  TTTCCAACCCTGCAGCCCTCATTGTTAGGCCTCTAATCATCTCCAGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACCCTGCAGCCCTCATTGTTAGGCCTCTAATCATCTCCAGAGAG  500

seq1  TATTTTGGAATTCACTCCTGTGCTTACACCTCTGGGCAGCAACCCTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGAATTCACTCCTGTGCTTACACCTCTGGGCAGCAACCCTGTAT  550

seq1  TCGGCAGCCTGGGTGTTGGGCTCTCTGTAAAGACGATGCAGCGCAACGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCAGCCTGGGTGTTGGGCTCTCTGTAAAGACGATGCAGCGCAACGTT  600

seq1  GGAAGGCTCCCTGCTCTGACACCCTCACAGCCACACAGCCTGGCCTTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCTCCCTGCTCTGACACCCTCACAGCCACACAGCCTGGCCTTGGA  650

seq1  ACTCAGTC-GGGGGCTCGCTTGCTCAGTGCCCTGAGCATCTGCAGTCCCC  699
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTCGGGGGGCTCGCTTGCTCAGTGCCCTGAGCATCTGCAGTCCCC  700

seq1  AGCACTGCACATGCCAGGTATGGTGGCACTCACCTGTAATGCCAGCACTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCACATGCCAGGTATGGTGGCACTCACCTGTAATGCCAGCACTC  750

seq1  AGGAGGTGGAGGCAGGGGGATCAGCAGGTCAAGGTCACAGACTCGGGAGA  799
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGGAGGTGGAGGCAGGGGGATCAGCAGGTTAAGGTCACAGACTCGGGAGA  800

seq1  TGGCTCTGTGTAT-AAGAGCACTGGCTGTGCAGAC-TTGAGGACCTGAGT  847
      ||||||||||||| ||||||||||||||||||||| ||||||||||||||
seq2  TGGCTCTGTGTATAAAGAGCACTGGCTGTGCAGACTTTGAGGACCTGAGT  850

seq1  CTGGACCCACAGCACCCATGTGAAAAAGTT-GGGTGTGGCCATGCTCTCC  896
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGGA-CCACAGCACCCATGTGAAAAAGTTGGGGTGTGGCCATGCTCTCC  899

seq1  TGTAACCCTAGTGCCTTGGGAAGAGGAGGAAG-TGAAGATACAGGGTCAC  945
      |||||||||  ||||||||||||| ||||||| |||||||||||||||||
seq2  TGTAACCCTTATGCCTTGGGAAGAAGAGGAAGTTGAAGATACAGGGTCAC  949

seq1  TGGTGCTTT--CTGGCCACTAGCCTCGCCTCCCCTGGCCCCAATGCCTGA  993
      |||||||||   |||||||||||||||||| |||||||||||| | ||||
seq2  TGGTGCTTTTCTTGGCCACTAGCCTCGCCT-CCCTGGCCCCAA-GGCTGA  997

seq1  CAGCTCCAAG  1003
      ||||||||||
seq2  CAGCTCCAAG  1007

seq1: chr7_134470578_134470820
seq2: B6Ng01-154I19.g_76_318 (reverse)

seq1  CTCCCCCTCCCTCTTCCTCTCCCTACCTTTGCTCCAGGGATGAAAAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCTCCCTCTTCCTCTCCCTACCTTTGCTCCAGGGATGAAAAATGC  50

seq1  TCAGACAGCTTTATAAACTTATTAGCTAGCCTGTATCAGCTAGCATCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACAGCTTTATAAACTTATTAGCTAGCCTGTATCAGCTAGCATCCAC  100

seq1  CAGCCTCCTTGGCTATCTCCCAGTGGTGGAGGCCACTGGATCTTGCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCCTTGGCTATCTCCCAGTGGTGGAGGCCACTGGATCTTGCTTCC  150

seq1  CCAAGACCTTACAGTTGTTCTGTGCTCCTCCTTCCAAAGCCTGGCCGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGACCTTACAGTTGTTCTGTGCTCCTCCTTCCAAAGCCTGGCCGAAA  200

seq1  AACCCTTCCCTTTCCCTGGGTCTCTTTTTCCTCCTGGGATGCA  243
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTTCCCTTTCCCTGGGTCTCTTTTTCCTCCTGGGATGCA  243