BAC Information

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BAC

Clone NameB6Ng01-154I23
Chromosome7 (Build37)
Map Location 68,204,321 - 68,317,350
singlet/doubletdoublet
Overlap geneLOC625287, D0Kist2, LOC100041248
Upstream geneSnrpn, EG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229
Downstream geneLOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154I23.bB6Ng01-154I23.g
ACCDH949571DH949572
length1,1631,147
definitionDH949571|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I23, 5' end.DH949572|Mus musculus domesticus DNA, BAC clone: B6Ng01-154I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,316,174 - 68,317,350)(68,204,321 - 68,206,687)
sequence
gaattcctgagtccaatttggagtccacgctgctcttcttcaaccttctt
taaccatcaaactctcctcaaatatttagggtgtctctggatccaggagc
cttacatgcctctctggggtcctctagatactaaagtacttcctcttctt
ccactgaaacctctcttccttttcaaaatgcctcttctagtctacctgtc
cagctcttttctaatctacttgataaaaccataattctactgggtatgtg
tcactctggacctccctgctttgtctactattattataatgccactctgg
tatggcagaaagtacctatagtcccacaggcctcctataaaaaagcaagg
attacatatttttttctgcttttaaatatttctttttgaccagccattca
atctaattggggtataccggatattgagcttcttggaggaaaacttactc
ttctctgctcccatgcctaggccatgcttcaccacctctcttacttgttg
accatgacctccttccaataaaaatttaaggcctcaaatctgttcctatg
tctaataaagtatctgccttacctcatactttgtgatgttattgagcatc
accacttgatgtttaactcaaacctgtaatctcacccaacattacctcta
tgtcattctctcaactactctcaccactatataaaagcagaatatctgtt
catccccgaaaccacacaaagattatgttcaacacagataaaattgcgat
ctggtaggaaccgattcaattcctcgcttgcccagaaagtgggaactttg
aggttaatgctaataatcagtgtactggcagggtagctcgagaaaattaa
gatttgccttttggctacactccaaacttggtcccatgaggcaattactt
ttcataaacagaaggaggtaacccagagaccagagaaatatgatgcacag
tccctcatcctatttatagaaaccctccttaagcacaaaattgtagtact
aattcttatgagagcatgcttgcctatgactctcacttctttcactcagt
tcagatattaaaaaaaaatcataaattctagtcaatagcttcactttccg
gagtatctggtgaatatggatcaatgatccttggatacaggttgcaatgg
gcctggtaatttt
gaattcacattaatctattcttatgtccttggacaaatcccaagtccaag
tgaatcaaggacctccacatgaaaccagatacacctaaatcacagaagaa
agtacagagaccaatttggagcatagactgaaggaaaggccattcagaga
ctgcctcacttggttatccatagcatatatagtcatcaaatacagacact
attgtggatgccaagaagtgcatgttgacaggatactaatgtaggtgttt
ttgaaaggctctgccagagcatgacaaatacaatcagatgcttgtagcca
accattgttcagagcatgtagtccccaatggaggagttataaaaaagcct
aaaggagctgaaggggtttacaaccccataggaagagcaacaatattaac
caaccagacccttgagatcccagagactaaaccaccaaccaaggagtaac
acatgaagggacctatggcccttgccccatatgtaacagaggatggcctt
gtcatttaataaggggatggaaacaaacttcaagcccatcaagattaacc
atttatcagtatggcaaagatgcatagtgatactagatagctactcttta
ccttggaatagaggtatagacagtatcttgatcaattcctttatcttttt
ttccttttcaggacatcttttatcatgattctctgagcattagactgtgt
taagtaaatgactcatgattttcacactacagtggtttactgaatgctga
aacacatttttcatagtattgtccctggaaaatccttattgaaatctgct
gtgtatttttttaagtaaaattcaaagtgaagcaaatgatgaaacttaaa
aaatgggctcctgagttaatagacatggaatatagtaataactgataaaa
ataaacagaaatatagatgattttccaagatactacatttaaccaatgaa
taccaagtgtttcttcactggagtctttgaattcattttccacaagtatt
ttctataagtgacccataaaaataaacatcaattcttccttccacctgaa
tggacatttaatcataaagaactttatttctatgtaaacatcctaccttg
attgaacttggatgtcgataagggagagtgacctctaactgtgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68316174_68317350
seq2: B6Ng01-154I23.b_48_1210 (reverse)

seq1  AAAATTACACAGACCCATTGCAACACTGTATCCAAGGGACCATTTTGAGC  50
      |||||||| ||| ||||||||||| |||||||||| ||| ||  |||| |
seq2  AAAATTAC-CAGGCCCATTGCAAC-CTGTATCCAA-GGATCA--TTGATC  45

seq1  CATATTCAACAGATAACTCCGGGAAAGTTGAAGGCTATTGACTAGAATTT  100
      |||||||| ||||| ||||| |||||| |||| |||||||||||||| ||
seq2  CATATTCACCAGAT-ACTCC-GGAAAG-TGAA-GCTATTGACTAGAA-TT  90

seq1  TATGATTTTTTTTTAATATCTGGAACTGAGTGGGAGAGGGAGTGAGAGTC  150
      ||||||||||||||||||||| ||||||||||  |||   ||||||||||
seq2  TATGATTTTTTTTTAATATCT-GAACTGAGTGAAAGA---AGTGAGAGTC  136

seq1  ATAGGCAAGCATGCTCTCATAAGAATTAGTACCTACAATTTTGTGCTTAA  200
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATAGGCAAGCATGCTCTCATAAGAATTAGTA-CTACAATTTTGTGCTTAA  185

seq1  GGAGGGTTTCTATAAATAGGATGAGGGACTGTGCATCATATTTCTCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTTTCTATAAATAGGATGAGGGACTGTGCATCATATTTCTCTGGT  235

seq1  CTCTGGGTTACCTCCTTCTGTTTATGAAAAGTAATTGCCTCATGGGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGTTACCTCCTTCTGTTTATGAAAAGTAATTGCCTCATGGGACCA  285

seq1  AGTTTGGAGTGTAGCCAAAAGGCAAATCTTAATTTTCTCGAGCTACCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGAGTGTAGCCAAAAGGCAAATCTTAATTTTCTCGAGCTACCCTG  335

seq1  CCAGTACACTGATTATTAGCATTAACCTCAAAGTTCCCACTTTCTGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACACTGATTATTAGCATTAACCTCAAAGTTCCCACTTTCTGGGCA  385

seq1  AGCGAGGAATTGAATCGGTTCCTACCAGATCGCAATTTTATCTGTGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGGAATTGAATCGGTTCCTACCAGATCGCAATTTTATCTGTGTTGA  435

seq1  ACATAATCTTTGTGTGGTTTCGGGGATGAACAGATATTCTGCTTTTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATCTTTGTGTGGTTTCGGGGATGAACAGATATTCTGCTTTTATAT  485

seq1  AGTGGTGAGAGTAGTTGAGAGAATGACATAGAGGTAATGTTGGGTGAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGAGAGTAGTTGAGAGAATGACATAGAGGTAATGTTGGGTGAGAT  535

seq1  TACAGGTTTGAGTTAAACATCAAGTGGTGATGCTCAATAACATCACAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTTTGAGTTAAACATCAAGTGGTGATGCTCAATAACATCACAAAG  585

seq1  TATGAGGTAAGGCAGATACTTTATTAGACATAGGAACAGATTTGAGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGTAAGGCAGATACTTTATTAGACATAGGAACAGATTTGAGGCCT  635

seq1  TAAATTTTTATTGGAAGGAGGTCATGGTCAACAAGTAAGAGAGGTGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTATTGGAAGGAGGTCATGGTCAACAAGTAAGAGAGGTGGTGA  685

seq1  AGCATGGCCTAGGCATGGGAGCAGAGAAGAGTAAGTTTTCCTCCAAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCCTAGGCATGGGAGCAGAGAAGAGTAAGTTTTCCTCCAAGAAG  735

seq1  CTCAATATCCGGTATACCCCAATTAGATTGAATGGCTGGTCAAAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATATCCGGTATACCCCAATTAGATTGAATGGCTGGTCAAAAAGAAA  785

seq1  TATTTAAAAGCAGAAAAAAATATGTAATCCTTGCTTTTTTATAGGAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAAGCAGAAAAAAATATGTAATCCTTGCTTTTTTATAGGAGGCC  835

seq1  TGTGGGACTATAGGTACTTTCTGCCATACCAGAGTGGCATTATAATAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGACTATAGGTACTTTCTGCCATACCAGAGTGGCATTATAATAATA  885

seq1  GTAGACAAAGCAGGGAGGTCCAGAGTGACACATACCCAGTAGAATTATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAAAGCAGGGAGGTCCAGAGTGACACATACCCAGTAGAATTATGG  935

seq1  TTTTATCAAGTAGATTAGAAAAGAGCTGGACAGGTAGACTAGAAGAGGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAAGTAGATTAGAAAAGAGCTGGACAGGTAGACTAGAAGAGGCA  985

seq1  TTTTGAAAAGGAAGAGAGGTTTCAGTGGAAGAAGAGGAAGTACTTTAGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAAAGGAAGAGAGGTTTCAGTGGAAGAAGAGGAAGTACTTTAGTA  1035

seq1  TCTAGAGGACCCCAGAGAGGCATGTAAGGCTCCTGGATCCAGAGACACCC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGGACCCCAGAGAGGCATGTAAGGCTCCTGGATCCAGAGACACCC  1085

seq1  TAAATATTTGAGGAGAGTTTGATGGTTAAAGAAGGTTGAAGAAGAGCAGC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTGAGGAGAGTTTGATGGTTAAAGAAGGTTGAAGAAGAGCAGC  1135

seq1  -TGGACTCCAAATTGGACTCAGGAATTC  1177
       |||||||||||||||||||||||||||
seq2  GTGGACTCCAAATTGGACTCAGGAATTC  1163

seq1: chr7_68204321_68206687
seq2: B6Ng01-154I23.g_69_1212

seq1  TTCACATTAATCTATTCTTATGTCCTTGGACAAATCCCAAGTCCAAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTAATCTATTCTTATGTCCTTGGACAAATCCCAAGTCCAAGTGA  50

seq1  ATCAAGGACCTCCACATGAAACCAGATACACCTAAATCACAGAAGAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGACCTCCACATGAAACCAGATACACCTAAATCACAGAAGAAAGT  100

seq1  ACAGAGACCAATTTGGAGCATAGACTGAAGGAAAGGCCATTCAGAGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACCAATTTGGAGCATAGACTGAAGGAAAGGCCATTCAGAGACTG  150

seq1  CCTCACTTGGTTATCCATAGCATATATAGTCATCAAATACAGACACTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTTGGTTATCCATAGCATATATAGTCATCAAATACAGACACTATT  200

seq1  GTGGATGCCAAGAAGTGCATGTTGACAGGATACTAATGTAGGTGTTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGCCAAGAAGTGCATGTTGACAGGATACTAATGTAGGTGTTTTTG  250

seq1  AAAGGCTCTGCCAGAGCATGACAAATACAATCAGATGCTTGTAGCCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTCTGCCAGAGCATGACAAATACAATCAGATGCTTGTAGCCAACC  300

seq1  ATTGTTCAGAGCATGTAGTCCCCAATGGAGGAGTTATAAAAAAGCCTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCAGAGCATGTAGTCCCCAATGGAGGAGTTATAAAAAAGCCTAAA  350

seq1  GGAGCTGAAGGGGTTTACAACCCCATAGGAAGAGCAACAATATTAACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAAGGGGTTTACAACCCCATAGGAAGAGCAACAATATTAACCAA  400

seq1  CCAGACCCTTGAGATCCCAGAGACTAAACCACCAACCAAGGAGTAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACCCTTGAGATCCCAGAGACTAAACCACCAACCAAGGAGTAACACA  450

seq1  TGAAGGGACCTATGGCCCTTGCCCCATATGTAACAGAGGATGGCCTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGACCTATGGCCCTTGCCCCATATGTAACAGAGGATGGCCTTGTC  500

seq1  ATTTAATAAGGGGATGGAAACAAACTTCAAGCCCATCAAGATTAACCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAAGGGGATGGAAACAAACTTCAAGCCCATCAAGATTAACCATT  550

seq1  TATCAGTATGGCAAAGATGCATAGTGATACTAGATAGCTACTCTTTACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTATGGCAAAGATGCATAGTGATACTAGATAGCTACTCTTTACCT  600

seq1  TGGAATAGAGGTATAGACAGTATCTTGATCAATTCCTTTATCTTTTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGAGGTATAGACAGTATCTTGATCAATTCCTTTATCTTTTTTTC  650

seq1  CTTTTCAGGACATCTTTTATCATGATTCTCTGAGCATTAGACTGTGTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGGACATCTTTTATCATGATTCTCTGAGCATTAGACTGTGTTAA  700

seq1  GTAAATGACTCATGATTTTCACACTACAGTGGTTTACTGAATGCTGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGACTCATGATTTTCACACTACAGTGGTTTACTGAATGCTGAAAC  750

seq1  ACATTTTTCATAGTATTGTCCCTGGAAAATCCTTATTGAAATCTGCTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTCATAGTATTGTCCCTGGAAAATCCTTATTGAAATCTGCTGTG  800

seq1  TATTTTTTTAAGTAAAATTCAAAAGTGAAGCAAATGATGAAACTTAAAAA  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATTTTTTTAAGTAAAATTC-AAAGTGAAGCAAATGATGAAACTTAAAAA  849

seq1  ATGGGCTCCTGAGTTAATAGACATGGAATATAGTAATAACTGATAAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTCCTGAGTTAATAGACATGGAATATAGTAATAACTGATAAAAAT  899

seq1  AAACAGAAATATAGATGATTTTCCAAGATACTACATTTAACCAATGAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAATATAGATGATTTTCCAAGATACTACATTTAACCAATGAATA  949

seq1  CCAAGTGTTTCTTCACTGGAGTCTTTGAATTCATTTTCCACAAGTA-TTT  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCAAGTGTTTCTTCACTGGAGTCTTTGAATTCATTTTCCACAAGTATTTT  999

seq1  CTATAAGTGACCCATAAAAATAAACATCAATTCTTCCCTCCACCTGAATG  1049
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTATAAGTGACCCATAAAAATAAACATCAATTCTTCCTTCCACCTGAATG  1049

seq1  GACATTTAATCCAATAAGAACTTTATTTCTATGTAAAACACTCTTACCTT  1099
      |||||||||| ||  ||||||||||||||||||| ||||| || ||||||
seq2  GACATTTAAT-CATAAAGAACTTTATTTCTATGT-AAACA-TCCTACCTT  1096

seq1  GATTGAACTT-GATGTCAGATACAGGTAGAGTGGCACTTCTAACTGTGAA  1148
      |||||||||| |||||| |||| ||| ||||||  || ||||||||||||
seq2  GATTGAACTTGGATGTC-GATA-AGGGAGAGTG--ACCTCTAACTGTGAA  1142

seq1  ATATTCAAGAATCATAAGTGACTAGAATTTGAGTTTCATGGTCTTTTAGT  1198
      |                                                 
seq2  AA------------------------------------------------  1144

seq1  GGTAATTAAAGGGAATATATGAGCTATCTCCAAATGAGGGTATATTTTTG  1248
                                                        
seq2  --------------------------------------------------  1144

seq1  ACTAGTCCTATATTTATGTGTCCCAGCCCCAAGTAAAAGACCATCAGAAC  1298
                                                        
seq2  --------------------------------------------------  1144

seq1  CCCGAGAAACAGACTTTCTTTTTCATTCAGTATAGCTATGTGAACAATAA  1348
                                                        
seq2  --------------------------------------------------  1144

seq1  ATTTGATAGCAGATTCTTTTCATTTAGAATGCTTCCTCCAAGGAATCTGA  1398
                                                        
seq2  --------------------------------------------------  1144

seq1  GGGTAAACTAGGAAAGAGGATAGCGTTTGAAATGTAAATAAAGAAGATAT  1448
                                                        
seq2  --------------------------------------------------  1144

seq1  TTAACACAATAGGAGAAAAGGGGAGGGGAGGGGGCCCCAGCAAAGGCCCA  1498
                                                        
seq2  --------------------------------------------------  1144

seq1  AATTAGGATCCTGCTCAAGGGGAGGGCCAAAGGCCTGACACTATTACTTA  1548
                                                        
seq2  --------------------------------------------------  1144

seq1  GGATCTGTAGTATTCACAAAAGTTTGCTATCATGACAGCACTATGAAAAA  1598
                                                        
seq2  --------------------------------------------------  1144

seq1  CCCAAAAAGCAGCTGAAAGATTCAGATGCACATATTTGCACTAAACCAAT  1648
                                                        
seq2  --------------------------------------------------  1144

seq1  AGACAGAAGCTGCTGACTAGTGTGGTTGAATTAGGGAATGGCTAGAAGAA  1698
                                                        
seq2  --------------------------------------------------  1144

seq1  ACTGACGAGGAGGGCGACCCTGTAAGAGAACCAACAGTCTCATCTAACTT  1748
                                                        
seq2  --------------------------------------------------  1144

seq1  GGACCGCTGAGATGTCTCAAACACTGAACCACCAACCAGGCAGCATACCC  1798
                                                        
seq2  --------------------------------------------------  1144

seq1  CAGTTGAAATGAGGCCCCCAAAACATATATAGCAGAGAATTGCTGGGTCA  1848
                                                        
seq2  --------------------------------------------------  1144

seq1  GGGTTCAGTCCGAGAACATGTACCTATTGCTCAAAACACTGGAGGCCCCA  1898
                                                        
seq2  --------------------------------------------------  1144

seq1  GGAAGTTTAGAGAACTGGTTGAATGGGTTGTGGGTGTTGGGACATACATG  1948
                                                        
seq2  --------------------------------------------------  1144

seq1  AGGAGGCAGGGGTAGGGAGGATATATAGCATATGTAACAGTTTGAGGATA  1998
                                                        
seq2  --------------------------------------------------  1144

seq1  GACCAGGTGGAATGAAATCTAGAATGTAAAACAAACAAACAAACAAATAA  2048
                                                        
seq2  --------------------------------------------------  1144

seq1  ATAAAAGACAAAAAAGAAAATATTGAAATAGACACCTGAATTAATAGACA  2098
                                                        
seq2  --------------------------------------------------  1144

seq1  TGGAAAATAGTAATAGTTGATAATAATGAACACAAATGTAGAGGATTTTA  2148
                                                        
seq2  --------------------------------------------------  1144

seq1  ACTGGTATTACATTTAAACAATTAATACCAGGTATTTCTTCACTGGAGAT  2198
                                                        
seq2  --------------------------------------------------  1144

seq1  TATGACCTCTTTTTTCAGAAATATTTCTATAAGTGACACATAAAAATAAA  2248
                                                        
seq2  --------------------------------------------------  1144

seq1  CATCAATTCTTACCTCCACGCGAATGGACATTTAATCCAATAAAAATTTA  2298
                                                        
seq2  --------------------------------------------------  1144

seq1  TTTCTGTGTAAACACTCATACCCTGATTGAATTTTAAGTCACAACAATTG  2348
                                                        
seq2  --------------------------------------------------  1144

seq1  GCTCTTCTAACTGTGAAAA  2367
                         
seq2  -------------------  1144