BAC Information

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BAC

Clone NameB6Ng01-154L23
Chromosome7 (Build37)
Map Location 149,476,211 - 149,476,728
singlet/doubletsinglet
Overlap geneENSMUSG00000038442
Upstream geneDrd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b, Tollip, EG623757, Brsk2, 2700078K21Rik, Dusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629
Downstream geneKrtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154L23.bB6Ng01-154L23.g
ACCDH949709DH949710
length1,0381,170
definitionDH949709|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L23, 5' end.DH949710|Mus musculus domesticus DNA, BAC clone: B6Ng01-154L23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtagtcagctacacggtctttctagggcattggaacactgg
tgaagactaaactgtatcaggatacaattttaaaaggcactatagtaaga
taacactaaaggagagtacatggatcctccttaacagccttgggtgacag
gcagggaacagagaggagggggtgatgaccggcttcttagcacaaggcca
tttggcttgttagggtgggaggctgtgaagagcttgccttttgacggtat
ggtctccaacctctctcccacctttgaattaaacttaataaggccacact
taaatgaggtgatcaaatgatcttctcatccttggatgagtgggcattaa
ctatggctgggggagcattgacccgattcatcccgtgggtgctgtcacga
cccacaatcatggctcttggtatcttttggggaggggaggcagagtctta
gaaagatacttttggttgcaactggaactagataccaacctccatccaaa
ccggatgtttctcagggaactcagaaatggtcaagttggaccatcccctt
cagtgcttagcctcggacccacactggtgcccattcatattatcacgtac
cagcatgcacagttctgagtactgtgcagctcccaagggagaattgtcaa
cctcagattcagcaaggcctctacaagaattatgtcactagtaacaccac
aatttgtggatcttaggttatattaggagctagaagtcaccctcctcatc
cctaatatctccacagcctgaggaaccaaagggaactttgcaatagcagc
aaaggtggaaaactggagaccagctaagagactaagcctgtcttatcaga
ataaaaacaacattcttctaatatctgaaatttctgcctttctagcccta
atagcaaaccttaatcacaaatcagaccaaaagccacaatatgtgctgga
atgcctttagaatgaaaattagtagctgccacctgcatgcttttgaggcg
ggaatgtaccacgcagcagtaggctgaggtgttgactg
gaattccttccagagaaattcaaggttgggtttatatgagtgtctggaca
caccatttttatatcatcttgttttatgagggttttttttaatgcaccac
atttaacactcattgactgcttaatgctgcacttgaagctagcagcagca
tcactcaagcatggaagaagcttctggaacacaaacagttctgtataagg
agcagagatatccaatagcactacacttagggtcatttcaaacagtgtag
tcacacagaagaagaaaaacagatgggagttggggggatggtactaagta
caccatgaaaagaaatgtttgtttatagcatgggagaaagaagagaagtt
tggcagcaagtatatgagaggtaaaataaggaagaaaataatattacttg
gtattaacttggttttgccattactactgtatggttataagggaatttac
ttaattactctctcagtttatccttttctaaaaatgaagatagtaatatt
actgtattgttttaattgaagattaaaataattacatgcataaaaaagtg
tttggttacgccccttctaagcacaacaaaagtaccattttggttagcta
agaaaaataaacagaggtgtgttaggagcaggtgtggcggcagtcctaaa
ggcgccagggactgcagctaagtcatatgacttgcacctgacttcctcat
ataagacacaaacatcttgagtgctgcgcaggtgtaccaggatacaggtg
aatccaatttggtggagatttgcccctgctgccctgattagctgaagcct
cgtgactggcaagggggcgtggccctgcggttcgtggatgagagagagta
taaaaggagtgagaggcccagggttcaggggagatataaacaagagatat
aaaacagggagatataaaacaggagatataaacagggagagatataaaca
gggagatattaacaggaaatatagagaagagaacagactgaataacgtgt
gcagaggatctgtagcagcgtcgtcttctggccagtgagcgcacgcagag
ttgtgctgaaccggaaaagaacatctcagcagagcgtagacctgctcaga
gatcgaactgctactgaacggtataaggctctgtaccactgtggaagaga
cttcgcaatggactccagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149476211_149476728
seq2: B6Ng01-154L23.b_170_586 (reverse)

seq1  TCCAACTAGACCGTTTCTGAGTTCCCTGAGAGACACACCTGGTTTACACG  50
      ||||||| |||| ||||||||||||||  |||| ||| | |||||  | |
seq2  TCCAACTTGACCATTTCTGAGTTCCCT--GAGAAACATCCGGTTTGGATG  48

seq1  GAGGTTGGTATCTAGTTCCAGTTACAAGC-AAAGAATCTTTCTAAGGCTC  99
      ||||||||||||||||||||||| ||| | |||| ||||||||||| |||
seq2  GAGGTTGGTATCTAGTTCCAGTTGCAACCAAAAGTATCTTTCTAAGACTC  98

seq1  TGCCTCCCCTCCCCAAAAGATACCAAGAGCCATAAGTGTGGGTCGTGACA  149
      ||||||||||||||||||||||||||||||||| | ||||||||||||||
seq2  TGCCTCCCCTCCCCAAAAGATACCAAGAGCCATGATTGTGGGTCGTGACA  148

seq1  GCACCCACAGGAGGAATCGGGTCAATGCTCCCCCAGCCATGGTTAATGCC  199
      |||||||| ||| ||||||||||||||||||||||||||| |||||||||
seq2  GCACCCACGGGATGAATCGGGTCAATGCTCCCCCAGCCATAGTTAATGCC  198

seq1  CACTCATCCAAGGATGAGAAGATCATTTAATCACCTCAGTTAAGTGTGGC  249
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  CACTCATCCAAGGATGAGAAGATCATTTGATCACCTCATTTAAGTGTGGC  248

seq1  CTTATTAAATTTAATTCAAAGG-GGGGGAGATGTTGGAGACCATACCATA  298
      |||||||| ||||||||||||| ||| |||| ||||||||||||||| | 
seq2  CTTATTAAGTTTAATTCAAAGGTGGGAGAGAGGTTGGAGACCATACCGTC  298

seq1  AGAAAGTAGGCCTTTCACAGTTTCCCACCCTAACAAGCCAAATGGCCTTG  348
      | || | | ||  |||||||  ||||||||||||||||||||||||||||
seq2  AAAAGGCAAGCTCTTCACAGCCTCCCACCCTAACAAGCCAAATGGCCTTG  348

seq1  TGCTAAGGAGCC-ATCATCACCCCCTCCTCCCTATTTTCTTCCTGGCACC  397
      ||||||| ||||  |||||||||||||||| || ||  || |||| ||||
seq2  TGCTAAGAAGCCGGTCATCACCCCCTCCTCTCTGTTCCCTGCCTGTCACC  398

seq1  TGAGGCTGTAAAAAGCCGAATTATAGTCCCCTCTTCATTATCTCTCCCTG  447
        |||||||  || |  ||                               
seq2  CAAGGCTGT-TAAGGAGGAT------------------------------  417

seq1  ACTCCCAAGACTTCTAAGGACATGAGTTACATGCTGAGCCCAGCCTGATA  497
                                                        
seq2  --------------------------------------------------  417

seq1  CCCAAGGCTGTTAAGGAGGAT  518
                           
seq2  ---------------------  417