BAC Information

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BAC

Clone NameB6Ng01-154N09
Chromosome7 (Build37)
Map Location 93,550,748 - 93,686,651
singlet/doubletdoublet
Overlap geneOlfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297
Upstream geneLOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303
Downstream geneOlfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154N09.bB6Ng01-154N09.g
ACCDH949773DH949774
length1,1141,106
definitionDH949773|Mus musculus domesticus DNA, BAC clone: B6Ng01-154N09, 5' end.DH949774|Mus musculus domesticus DNA, BAC clone: B6Ng01-154N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,550,748 - 93,551,883)(93,685,537 - 93,686,651)
sequence
gaattcatggtacgggatgccaagactccaggagactaagtttctgtgaa
actttttgcctcaggactgtggccaagcttttgggcttgccacacagact
tcactggaggtgggtgtgacagaggagatagtgtaaaaagcccctgtagc
accaacagccaacaaggtcattatcactgggcttggaattatgagtactg
tgccactagataacacccgagaacacaggcttggaacatgggacctaata
acattgatcaaatccatggtgtaaggaccataaatacgggcagaacctaa
gctagtgagataaaaatgtgatttctcaccaactgatctcaaggaaactg
ctgcacctttacagccaagcagtaggcaaagagagatgttgcacaactta
agtctcaggttatgacaggggtcttgtctcttctgccgagaactagctcc
tgctgaatagtgtagagatgtgagccttgtaccagtctcctgcagaacca
gaaaatcgtattggcaatggaagctgatttatttccatatctcccccagt
ggcctttgtgcagcgtttcggattgcatctggtattgagtttactgaatc
ttctattattcatatataaataacgatgtccatcattgtagtaaccaaca
gggaaattctgatactcctataccataagattttatagtagtgggctata
atgttgtatagtatttcttattttttaaaaatatctgagtgtgatccata
gtttacctgagtgtgacgtaattcttttaaatatacaaaaactagacaaa
aagaatttaaatgcttaaatatacttgtgcaagctcatgaatctccacag
tgtcatttgaatttggatacagctttgaaaaccatatgttgctattagtc
tctgttgaatccttgttttaatgctttagtatggcttttcttttctttct
ttctcccttcctttctttcttttcttctccttcctttctttcattcgtct
cttctttctttcttctttctttcccctcttcttctttcttcttctttggt
tatttgttttggggtttgtgctgtgtgttttaaagagtgatgaatgcgtt
ctgttcgtttagtt
gaattccaggacagccagggctacacagagaaaccttgtctcaaaaaaac
aaaacaaaacaaaacaaaacaaaaaaagatataatttcattaatttcaca
atcagccccatattactgagaattatgaatgaccagttgatatatttgga
atgtgcattcattaatcctttacaattaccagtgaggcctttatacaggt
aaggaaatatgattctaaagtctaatataaatttaaagtcgacttacagt
gtataaaaacatactagtatgtttatttttactattcaaactattttagt
gatagaaactcactctacatagagaattatgttctacataaacattttat
ttgggacatagcaggcacattgtccttcatcccagtctcctcactattct
cagcatgttgtcccttgtctcagtcctactaccctccttcattcctccag
tgtcccatctgatatttaagggtcttttgggattctagaaaatgcaagtt
atggaaaacatgtatttatccctctatgtatttcttattttatttggtat
gatgatttctatttgcatccatttttatcaaacaacataatttcattgca
ctttgttattaaataaaattctattgttcatatataccatcttcttttcc
atgaattcattaactgatgtctacggtggttccatatcttgccttcaagg
aatattgcgacaataagcacaattaagcagttatgtctgtcatatgtaga
gagttcttaagtcatgcatccagaactggtgtaggtaagtcatagagtag
ctctgttcatagatttcttgaaataccttcatattattcccatggtaagt
agaatacatgcaccccaactattattgcataagtttccttatctcaacac
atcctcaacagcatttgtatttgtttgttacttaatggagagagaaagat
gcccaagctggtttgatttaaatttccctatcattaatatgctaaatgct
ttttatgttattgatatttgtgtcatcctttgagagtgtatgtttatttc
attgcatgaagttggatattttttaaatgtttattgtatattctagactc
atgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93550748_93551883
seq2: B6Ng01-154N09.b_50_1163

seq1  GAATTCATGGTACGGGATGCCAAGACTCCAGGAGACTAAGTTTCTGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGTACGGGATGCCAAGACTCCAGGAGACTAAGTTTCTGTGAA  50

seq1  ACTTTTTGCCTCAGGACTGTGGCCAAGCTTTTGGGCTTGCCACACAGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTGCCTCAGGACTGTGGCCAAGCTTTTGGGCTTGCCACACAGACT  100

seq1  TCACTGGAGGTGGGTGTGACAGAGGAGATAGTGTAAAAAGCCCCTGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAGGTGGGTGTGACAGAGGAGATAGTGTAAAAAGCCCCTGTAGC  150

seq1  ACCAACAGCCAACAAGGTCATTATCACTGGGCTTGGAATTATGAGTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACAGCCAACAAGGTCATTATCACTGGGCTTGGAATTATGAGTACTG  200

seq1  TGCCACTAGATAACACCCGAGAACACAGGCTTGGAACATGGGACCTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTAGATAACACCCGAGAACACAGGCTTGGAACATGGGACCTAATA  250

seq1  ACATTGATCAAATCCATGGTGTAAGGACCATAAATACGGGCAGAACCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGATCAAATCCATGGTGTAAGGACCATAAATACGGGCAGAACCTAA  300

seq1  GCTAGTGAGATAAAAATGTGATTTCTCACCAACTGATCTCAAGGAAACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGAGATAAAAATGTGATTTCTCACCAACTGATCTCAAGGAAACTG  350

seq1  CTGCACCTTTACAGCCAAGCAGTAGGCAAAGAGAGATGTTGCACAACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCTTTACAGCCAAGCAGTAGGCAAAGAGAGATGTTGCACAACTTA  400

seq1  AGTCTCAGGTTATGACAGGGGTCTTGTCTCTTCTGCCGAGAACTAGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAGGTTATGACAGGGGTCTTGTCTCTTCTGCCGAGAACTAGCTCC  450

seq1  TGCTGAATAGTGTAGAGATGTGAGCCTTGTACCAGTCTCCTGCAGAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATAGTGTAGAGATGTGAGCCTTGTACCAGTCTCCTGCAGAACCA  500

seq1  GAAAATCGTATTGGCAATGGAAGCTGATTTATTTCCATATCTCCCCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCGTATTGGCAATGGAAGCTGATTTATTTCCATATCTCCCCCAGT  550

seq1  GGCCTTTGTGCAGCGTTTCGGATTGCATCTGGTATTGAGTTTACTGAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTGTGCAGCGTTTCGGATTGCATCTGGTATTGAGTTTACTGAATC  600

seq1  TTCTATTATTCATATATAAATAACGATGTCCATCATTGTAGTAACCAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTATTCATATATAAATAACGATGTCCATCATTGTAGTAACCAACA  650

seq1  GGGAAATTCTGATACTCCTATACCATAAGATTTTATAGTAGTGGGCTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTCTGATACTCCTATACCATAAGATTTTATAGTAGTGGGCTATA  700

seq1  ATGTTGTATAGTATTTCTTATTTTTTAAAAATATCTGAGTGTGATCCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTATAGTATTTCTTATTTTTTAAAAATATCTGAGTGTGATCCATA  750

seq1  GTTTACCTGAGTGTGACGTAATTCTTTTAAATATACAAAAACTAGACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACCTGAGTGTGACGTAATTCTTTTAAATATACAAAAACTAGACAAA  800

seq1  AAGAATTTAAATGCTTAAATATACTTGTGCAAGCTCATGAATCTCCACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTAAATGCTTAAATATACTTGTGCAAGCTCATGAATCTCCACAG  850

seq1  TGTCATTTGAATTTGGATACAGCTTTGAAAACCATATGTTGCTATTAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGAATTTGGATACAGCTTTGAAAACCATATGTTGCTATTAGTC  900

seq1  TCTGTTGAATCCTTGTTTTAATGCTTAAGTATGGCTTTTCTTTTCTTTCT  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCTGTTGAATCCTTGTTTTAATGCTTTAGTATGGCTTTTCTTTTCTTTCT  950

seq1  TTCTCCCTTCCTTTCTTTCTTTTCTTTCTTCCTTCCTTTCTTTTCATTCG  1000
      ||||||||||||||||||||||||||   ||||||||||| |||||||||
seq2  TTCTCCCTTCCTTTCTTTCTTTTCTT--CTCCTTCCTTTC-TTTCATTCG  997

seq1  TTCTTTCTTCCTTTCTTTCTTTCTTTCTTTCTCTCTTTCTTTCTTTCTTT  1050
      |   ||||| ||||| |||||||||||   | |||||       ||||||
seq2  TCTCTTCTTTCTTTC-TTCTTTCTTTC---CCCTCTT------CTTCTTT  1037

seq1  CTTTCTTTCTTTTGGTTATTTGTTTTTGGGGTTTTGTTGCTGTTGTTGTT  1100
      | |||||   |||||||||||| |||||||||||   ||||| |||   |
seq2  C-TTCTT--CTTTGGTTATTTG-TTTTGGGGTTT--GTGCTG-TGT--GT  1078

seq1  TTTAAAGAGT-ATGAATGCCGTTCTGTTCTTTTAGTT  1136
      |||||||||| ||||||| |||||||||| |||||||
seq2  TTTAAAGAGTGATGAATG-CGTTCTGTTCGTTTAGTT  1114

seq1: chr7_93685537_93686651
seq2: B6Ng01-154N09.g_67_1172 (reverse)

seq1  CTGCATTGAAGTCTAGAATATACAAATAAACATTTAATAAATATCCAAAC  50
      ||||||   |||||||||||||| ||||||||||||| ||||||||||  
seq2  CTGCAT--GAGTCTAGAATATAC-AATAAACATTTAAAAAATATCCAACT  47

seq1  TCATGCAAATGAAATAAACATACACTTCTCAAAGGATGAACAACAAATAT  100
      |||||| |||||||||||||||||| |||||||||||||   ||||||||
seq2  TCATGC-AATGAAATAAACATACAC-TCTCAAAGGATGA--CACAAATAT  93

seq1  CCAATAAACATAAAAAGCATTTAGCATATTAATGATAGGGAAATTTAAAT  150
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  -CAAT-AACATAAAAAGCATTTAGCATATTAATGATAGGGAAATTTAAAT  141

seq1  CAAACCAGCTTGGGCATCTTTCTCTCTCCATTAAGTAACAAACAAATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAGCTTGGGCATCTTTCTCTCTCCATTAAGTAACAAACAAATACA  191

seq1  AATGCTGTTGAGGATGTGTTGAGATAAGGAAACTTATGCAATAATAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTTGAGGATGTGTTGAGATAAGGAAACTTATGCAATAATAGTTG  241

seq1  GGGTGCATGTATTCTACTTACCATGGGAATAATATGAAGGTATTTCAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCATGTATTCTACTTACCATGGGAATAATATGAAGGTATTTCAAGA  291

seq1  AATCTATGAACAGAGCTACTCTATGACTTACCTACACCAGTTCTGGATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATGAACAGAGCTACTCTATGACTTACCTACACCAGTTCTGGATGC  341

seq1  ATGACTTAAGAACTCTCTACATATGACAGACATAACTGCTTAATTGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTAAGAACTCTCTACATATGACAGACATAACTGCTTAATTGTGCT  391

seq1  TATTGTCGCAATATTCCTTGAAGGCAAGATATGGAACCACCGTAGACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCGCAATATTCCTTGAAGGCAAGATATGGAACCACCGTAGACATC  441

seq1  AGTTAATGAATTCATGGAAAAGAAGATGGTATATATGAACAATAGAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATGAATTCATGGAAAAGAAGATGGTATATATGAACAATAGAATTT  491

seq1  TATTTAATAACAAAGTGCAATGAAATTATGTTGTTTGATAAAAATGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATAACAAAGTGCAATGAAATTATGTTGTTTGATAAAAATGGATG  541

seq1  CAAATAGAAATCATCATACCAAATAAAATAAGAAATACATAGAGGGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGAAATCATCATACCAAATAAAATAAGAAATACATAGAGGGATAA  591

seq1  ATACATGTTTTCCATAACTTGCATTTTCTAGAATCCCAAAAGACCCTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTTTTCCATAACTTGCATTTTCTAGAATCCCAAAAGACCCTTAA  641

seq1  ATATCAGATGGGACACTGGAGGAATGAAGGAGGGTAGTAGGACTGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGATGGGACACTGGAGGAATGAAGGAGGGTAGTAGGACTGAGACA  691

seq1  AGGGACAACATGCTGAGAATAGTGAGGAGACTGGGATGAAGGACAATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAACATGCTGAGAATAGTGAGGAGACTGGGATGAAGGACAATGTG  741

seq1  CCTGCTATGTCCCAAATAAAATGTTTATGTAGAACATAATTCTCTATGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTATGTCCCAAATAAAATGTTTATGTAGAACATAATTCTCTATGTA  791

seq1  GAGTGAGTTTCTATCACTAAAATAGTTTGAATAGTAAAAATAAACATACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGTTTCTATCACTAAAATAGTTTGAATAGTAAAAATAAACATACT  841

seq1  AGTATGTTTTTATACACTGTAAGTCGACTTTAAATTTATATTAGACTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTTTTTATACACTGTAAGTCGACTTTAAATTTATATTAGACTTTA  891

seq1  GAATCATATTTCCTTACCTGTATAAAGGCCTCACTGGTAATTGTAAAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATATTTCCTTACCTGTATAAAGGCCTCACTGGTAATTGTAAAGGA  941

seq1  TTAATGAATGCACATTCCAAATATATCAACTGGTCATTCATAATTCTCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAATGCACATTCCAAATATATCAACTGGTCATTCATAATTCTCAG  991

seq1  TAATATGGGGCTGATTGTGAAATTAATGAAATTATATCTTTTTTTGTTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGGGGCTGATTGTGAAATTAATGAAATTATATCTTTTTTTGTTTT  1041

seq1  GTTTTGTTTTGTTTTGTTTTTTTGAGACAAGGTTTCTCTGTGTAGCCCTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTGTTTTTTTGAGACAAGGTTTCTCTGTGTAGCCCTG  1091

seq1  GCTGTCCTGGAATTC  1115
      |||||||||||||||
seq2  GCTGTCCTGGAATTC  1106