BAC Information

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BAC

Clone NameB6Ng01-155H11
Chromosome7 (Build37)
Map Location 133,918,500 - 134,030,567
singlet/doubletdoublet
Overlap geneGdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik
Upstream geneD430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3
Downstream geneKctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155H11.bB6Ng01-155H11.g
ACCDH950240DH950241
length1,1161,061
definitionDH950240|Mus musculus domesticus DNA, BAC clone: B6Ng01-155H11, 5' end.DH950241|Mus musculus domesticus DNA, BAC clone: B6Ng01-155H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,029,436 - 134,030,567)(133,918,500 - 133,919,564)
sequence
gaattctactcagacagctccagtggatctactgaatggggatccctggt
actggtgtctactctgccaaagcgctttatgccttcactcagtcaccagg
gcacatagaaaaccgttttctctgctaactagatctttggagggaaagag
cttggcaaatgtagtagatgaggtcctcatagtactaatactactaattt
acaacatctctcttagtgaataaaagcaatccagaacagctcttcatctt
ctctctctctctctctctctctctctctctctctctctcacacacacaca
cacacacacacacacacacacacacacacacacacacgtttgagagctgc
atgcttttcgtcctgctcctaagccctccccaggttctgctggcctctgt
gtgctaggacatctctgtgggagaagctgaaacagcctagactgtggaat
gaatccagcccagaggaactggaagctcagagaacactgctaattttcct
ttgggccaggcctcaccacccatctttttacaataggaaacagtggagcc
tattcactcggaagtgggaaaaggcatctagctttttggctgctggttga
tcctagagttccaaggctaccccagtgggattgagtgccagaacctatcc
ctagatgtcgcttcctctgatttttgaatccttgcagaaattcatccagg
ggttttcttacctgtcctgttttcttccttttctccaggtacaggtcaag
ttcttggggcccacttctgagtttagaagacctattacaaaaagtgaaga
actagactgtgggaaaataaatggcttttgactactattgtgtaagtact
tactggggattggattaaagtaaatactggggacttttccttgttgacgt
aaaagaatttttttgttttgttttcgagacagtttctctttgtatccctg
gctgtctggacttacttgcagacaagctgcctagaactcagaagatctct
tgcttgcctcctaagtgctgggatgaagcaatgcaccacctccatggggc
tttctttctattggtgtgctcatgcatgcccggcatggggttccagagac
agttgctttcctctct
gaattccttgtttgttttgagacaatgtttcactgtcaactctggctggc
ctaaaacttactatatagacctggcctaaaacttgcagagatccacctac
ctctgcatcctgagttctgagactgttcaactgcaagttcatgtaattac
atggtttatgtatttgtttttgaggcagaggcttactagctaaccccagc
gggctgctactctgtgtagcccagatggcctcccaagtgcagagttacaa
acatgcatggccacacttggctccaagatcctatacctaagttttgacag
gagctgtgtttaataaccaatttggaaatttctaaaaaagataaccatca
gctccaggacacccggttctgggaggtctgtgcagaaggaggggctgcca
cctcctggacgcgaaaggaagcttggggttggtgtttggaaactaacttg
ttttcttcctctgttcaggtgctattttggtgccttaatgaagaatcgga
ttttgaagtggccttcagcttgggagccaatggcgtcatgaccgattacc
ccacagccctgagacactacctggacaagcaggaagaagagacccagcct
cctcagcctgaggccctgtcctgtctttctcttaaaaaataaatattttc
ttgtcagtaacatagttcatggaacaaggggttggagggtcgattcggga
ggctaaaaagatggcattagcggctggggatggaagttggtggtagaagg
cttgcataccatgaatgcagctcagagtttactgcaagcaagtgcacata
gcatcttaggagagatcaagaaagcctgtggtgagctaggcctaggcttt
aacctcagtacttggaggcagaggcaggtggatttctgtggagttataat
gccagggctacaaagtgagaactctgcccactgacaccctctgcaaataa
aagcctgggggtgtcagtaggctggcccacttgttcattacattcagacc
cagagaatggcaccacacctgtgcagcttggcctccactcttaagcatgc
tatccaagcgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134029436_134030567
seq2: B6Ng01-155H11.b_47_1162 (reverse)

seq1  AGAGAGCA---CAACTG-CTCTGGGACCCCCATGCACGGGCCATGGCATG  46
      |||||| |   |||||| |||| ||| |||||||| |||| ||| |||||
seq2  AGAGAGGAAAGCAACTGTCTCT-GGAACCCCATGC-CGGG-CAT-GCATG  46

seq1  AGCACACCCAATAAGAAAGAAAAGCCCCCATGGA-GTGGTGGCATGTGCC  95
      |||||| ||||| |||||||||   ||||||||| ||||| |||| ||| 
seq2  AGCACA-CCAAT-AGAAAGAAA--GCCCCATGGAGGTGGT-GCAT-TGC-  89

seq1  TTTCATCCCAGCACTTAGGAGGCAAAGGCAGGAGGATC-TCTGAGTTCTA  144
       ||||||||||||||||||||||||  ||| || |||| |||||||||||
seq2  -TTCATCCCAGCACTTAGGAGGCAA--GCAAGA-GATCTTCTGAGTTCTA  135

seq1  GGCCAGCTTGGTCTGCAAAGTAAGTTCCAGAACAGCCAGGGATACATAGA  194
      || |||||| |||||| ||||||| ||||| ||||||||||||||| |||
seq2  GG-CAGCTT-GTCTGC-AAGTAAG-TCCAG-ACAGCCAGGGATACAAAGA  180

seq1  GAAACTGTCTCGAAAAACAAAACAAAAAAATTCTTTTACGTCAACAAGGA  244
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAAACTGTCTCG-AAAACAAAACAAAAAAATTCTTTTACGTCAACAAGGA  229

seq1  AAAGTCCCCAGTATTTACTTTAATCCAATCCCCAGTAAGTACCTTACACA  294
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAGTCCCCAGTATTTACTTTAATCCAATCCCCAGTAAGTA-CTTACACA  278

seq1  ATAGTAGTCAAAAGCCATTTATTTTCCCACAGTCTAGTTCTTCACTTTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGTCAAAAGCCATTTATTTTCCCACAGTCTAGTTCTTCACTTTTT  328

seq1  GTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACTTGACCTGTAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGGTCTTCTAAACTCAGAAGTGGGCCCCAAGAACTTGACCTGTAC  378

seq1  CTGGAGAAAAGGAAGAAAACAGGACAGGTAAGAAAACCCCTGGATGAATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAAAAGGAAGAAAACAGGACAGGTAAGAAAACCCCTGGATGAATT  428

seq1  TCTGCAAGGATTCAAAAATCAGAGGAAGCGACATCTAGGGATAGGTTCTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGGATTCAAAAATCAGAGGAAGCGACATCTAGGGATAGGTTCTG  478

seq1  GCACTCAATCCCACTGGGGTAGCCTTGGAACTCTAGGATCAACCAGCAGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAATCCCACTGGGGTAGCCTTGGAACTCTAGGATCAACCAGCAGC  528

seq1  CAAAAAGCTAGATGCCTTTTCCCACTTCCGAGTGAATAGGCTCCACTGTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGCTAGATGCCTTTTCCCACTTCCGAGTGAATAGGCTCCACTGTT  578

seq1  TCCTATTGTAAAAAGATGGGTGGTGAGGCCTGGCCCAAAGGAAAATTAGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTGTAAAAAGATGGGTGGTGAGGCCTGGCCCAAAGGAAAATTAGC  628

seq1  AGTGTTCTCTGAGCTTCCAGTTCCTCTGGGCTGGATTCATTCCACAGTCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTCTGAGCTTCCAGTTCCTCTGGGCTGGATTCATTCCACAGTCT  678

seq1  AGGCTGTTTCAGCTTCTCCCACAGAGATGTCCTAGCACACAGAGGCCAGC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTTTCAGCTTCTCCCACAGAGATGTCCTAGCACACAGAGGCCAGC  728

seq1  AGAACCTGGGGAGGGCTTAGGAGCAGGACGAAAAGCATGCAGCTCTCAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGGGGAGGGCTTAGGAGCAGGACGAAAAGCATGCAGCTCTCAAA  778

seq1  CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  828

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGATGAAGAGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGATGAAGAGC  878

seq1  TGTTCTGGATTGCTTTTATTCACTAAGAGAGATGTTGTAAATTAGTAGTA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGGATTGCTTTTATTCACTAAGAGAGATGTTGTAAATTAGTAGTA  928

seq1  TTAGTACTATGAGGACCTCATCTACTACATTTGCCAAGCTCTTTCCCTCC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACTATGAGGACCTCATCTACTACATTTGCCAAGCTCTTTCCCTCC  978

seq1  AAAGATCTAGTTAGCAGAGAAAACGGTTTTCTATGTGCCCTGGTGACTGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTAGTTAGCAGAGAAAACGGTTTTCTATGTGCCCTGGTGACTGA  1028

seq1  GTGAAGGCATAAAGCGCTTTGGCAGAGTAGACACCAGTACCAGGGATCCC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGCATAAAGCGCTTTGGCAGAGTAGACACCAGTACCAGGGATCCC  1078

seq1  CATTCAGTAGATCCACTGGAGCTGTCTGAGTAGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTAGATCCACTGGAGCTGTCTGAGTAGAATTC  1116

seq1: chr7_133918500_133919564
seq2: B6Ng01-155H11.g_68_1128

seq1  GAATTCCTTGTTTGTTTTGAGACAATGTTTCACTGTCAACTCTGGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTGTTTTGAGACAATGTTTCACTGTCAACTCTGGCTGGC  50

seq1  CTAAAACTTACTATATAGACCTGGCCTAAAACTTGCAGAGATCCACCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACTTACTATATAGACCTGGCCTAAAACTTGCAGAGATCCACCTAC  100

seq1  CTCTGCATCCTGAGTTCTGAGACTGTTCAACTGCAAGTTCATGTAATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATCCTGAGTTCTGAGACTGTTCAACTGCAAGTTCATGTAATTAC  150

seq1  ATGGTTTATGTATTTGTTTTTGAGGCAGAGGCTTACTAGCTAACCCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTATGTATTTGTTTTTGAGGCAGAGGCTTACTAGCTAACCCCAGC  200

seq1  GGGCTGCTACTCTGTGTAGCCCAGATGGCCTCCCAAGTGCAGAGTTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCTACTCTGTGTAGCCCAGATGGCCTCCCAAGTGCAGAGTTACAA  250

seq1  ACATGCATGGCCACACTTGGCTCCAAGATCCTATACCTAAGTTTTGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCATGGCCACACTTGGCTCCAAGATCCTATACCTAAGTTTTGACAG  300

seq1  GAGCTGTGTTTAATAACCAATTTGGAAATTTCTAAAAAAGATAACCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTGTTTAATAACCAATTTGGAAATTTCTAAAAAAGATAACCATCA  350

seq1  GCTCCAGGACACCCGGTTCTGGGAGGTCTGTGCAGAAGGAGGGGCTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGGACACCCGGTTCTGGGAGGTCTGTGCAGAAGGAGGGGCTGCCA  400

seq1  CCTCCTGGACGCGAAAGGAAGCTTGGGGTTGGTGTTTGGAAACTAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGACGCGAAAGGAAGCTTGGGGTTGGTGTTTGGAAACTAACTTG  450

seq1  TTTTCTTCCTCTGTTCAGGTGCTATTTTGGTGCCTTAATGAAGAATCGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCTCTGTTCAGGTGCTATTTTGGTGCCTTAATGAAGAATCGGA  500

seq1  TTTTGAAGTGGCCTTCAGCTTGGGAGCCAATGGCGTCATGACCGATTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTGGCCTTCAGCTTGGGAGCCAATGGCGTCATGACCGATTACC  550

seq1  CCACAGCCCTGAGACACTACCTGGACAAGCAGGAAGAAGAGACCCAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGCCCTGAGACACTACCTGGACAAGCAGGAAGAAGAGACCCAGCCT  600

seq1  CCTCAGCCTGAGGCCCTGTCCTGTCTTTCTCTTAAAAAATAAATATTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCTGAGGCCCTGTCCTGTCTTTCTCTTAAAAAATAAATATTTTC  650

seq1  TTGTCAGTAACATAGTTCATGGAACAAGGGGTTGGAGGGTCGATTCGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTAACATAGTTCATGGAACAAGGGGTTGGAGGGTCGATTCGGGA  700

seq1  GGCTAAAAAGATGGCATTAGCGGCTGGGGATGGAAGTTGGTGGTAGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAAAGATGGCATTAGCGGCTGGGGATGGAAGTTGGTGGTAGAAGG  750

seq1  CTTGCATACCATGAATGCAGCTCAGAGTTTACTGCAAGCAAGTGCACATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATACCATGAATGCAGCTCAGAGTTTACTGCAAGCAAGTGCACATA  800

seq1  GCATCTTAGGAGAGATCAAGAAAGCCTGTGGTGAGCTAGGCCTAGGCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTAGGAGAGATCAAGAAAGCCTGTGGTGAGCTAGGCCTAGGCTTT  850

seq1  AACCTCAGTACTTGGAAGGCAGAGGCAGGTGGATTTCTGT-GAGTTATAA  899
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  AACCTCAGTACTTGG-AGGCAGAGGCAGGTGGATTTCTGTGGAGTTATAA  899

seq1  TGCCAGGGCTACAAAGTGAG-ACTCTGCCCACTGACACCC-CTGCAAATA  947
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  TGCCAGGGCTACAAAGTGAGAACTCTGCCCACTGACACCCTCTGCAAATA  949

seq1  AAAGCCTGGGGGTGTCAGTAGGCTGGCCCACTTGTTCCACTACATTCCAG  997
      |||||||||||||||||||||||||||||||||||| || |||||| |||
seq2  AAAGCCTGGGGGTGTCAGTAGGCTGGCCCACTTGTT-CATTACATT-CAG  997

seq1  ACCCAGCAGAGTGGCACCACACCCTGTGCCAGCTTGGCCTCCACTCTAAA  1047
      |||||| ||| |||||||||| |||||| |||||||||||||||||| ||
seq2  ACCCAG-AGAATGGCACCACA-CCTGTG-CAGCTTGGCCTCCACTCTTAA  1044

seq1  GCATGCTAGCCCAAGCGT  1065
      ||||||||  ||||||||
seq2  GCATGCTA-TCCAAGCGT  1061