BAC Information

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BAC

Clone NameB6Ng01-155I15
Chromosome7 (Build37)
Map Location 117,401,996 - 117,564,473
singlet/doubletdoublet
Overlap geneSwap70, EG668368, Sbf2
Upstream geneStk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1
Downstream geneLOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155I15.bB6Ng01-155I15.g
ACCDH950293DH950294
length1,1321,129
definitionDH950293|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I15, 5' end.DH950294|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,401,996 - 117,403,123)(117,563,329 - 117,564,473)
sequence
gaattcctctcagaataggaacatgtggtgcagttccagcaccagggaag
tttgaggcaggaggatcaagagattgaggcctgcctggtttacatgacaa
ggtctgtttctagccactaagtagaaatagggttagacttagagattatc
cttctgtgagtgagcaggagtattcctgcagggtagagaaggggtcactg
gagagattaatatgaacttgcttcagttgcggagtcagcctcttgaagtt
tcaccgcggccttggcacactgggctttagcaagccatctgccctttgac
cgagcactgcacccaaggtcacactaggatgtgggaaatagtgcctatta
cattttgtttcctttctaaatatttaacaatataaaaactatacgtttga
actgtttttgaaatgcagggttttagaaaatgtaacataaaaacatacat
ttaaaaaaataaaatttagaatgcaatgtctttgtgggtttaacttatct
gttggtaattttaaagtcttacaagttcagagtgtctcgtgtacataaga
gacgtttactgctcgttacatagagtctaaatagaatgtatttaccttgt
atacacacacacacacacacacacacacacacacacgcacgcacgcacgc
acgcaccacacacgcacgcacgcacgcacgcacgcacgcacgcacgcacg
cacgcacgcacacacgcacgtgctcgagcatgctcctttgtttgtttgtt
tgagacaggatctctctttctggctggccttgaactccgagatccacctg
cctctgcctcccgagtgctgggttagaggcgtgctcctgttcctccactc
ttgcataatttttatgtttctactaatccatctatcataatgatcactgt
gtttaaagtttacagtttttgttgttacttgttttgttttgagacatggt
ttcacagtggaggctgggctgacctcaaacttgtggctttcccctggttt
ccacccctgagccccgagatcatagatattgcttgtaccatacccagtgg
aatcaagcctttttttcctctactttcagccaatacctgtctaacgaccg
ccagtttggtgaataatgcacccccaaatatt
gaattctcttgttctcagacccttcctgctgccttgagggcccttaaagg
aaaagcagcaagacagtgtctcactgatgaactgggcttgcacgttcagc
agaaccgggcaatactggaccatcaacagtttgactacataataaggatg
atgaactgtactctacaggtaatcttgagtgattttagattattcccatt
ttgcaaataccttttttccccaaaagatatattaattactgaactatcaa
tgtcttgaggctgctatggctaaaaaagagctgaaatccatggagtcact
tgctccttagctgatgtaaatcctcacttctttgttctttccttgttttc
tagtgacaaatactttgttactttactgattttataatatgagcaatata
ttaaaggcccatagtcgtatattaccaaattttatacttatgtctgttaa
tgtagtttttggctattttattgggttttaatgttttattacaccctaat
caaaccttcaacactaggtaggagagaaagaaggttagagggaaagggaa
catacatctctttggactacttcctactgattaggatgttgagtcccttg
aggcaagtccaatcttcgtcatcagaatacctcaatttcttctcatcaaa
ccacaataacaacgaccaggagcagcacgggggcagcagcctccacaggc
tctcagggcctggctgtgcatgaagcaaatcatgacacctgctgttaggt
ggcctcttatcccacatctgggactaaaacaaaaacctattcacataaca
taactgggttttttaagaaaccaaaattctctctatatatgtcactccct
tttcagtttttagatgttattgaagcagagaggaattaataacgagcatc
caataatactgaatgaattgaaagaaacagttttctataggcttcagata
gtatatgttcttacagagatgacattcctataaaataatgagagcccaaa
ttagaagaaacaatttgggttcttgtctttgccatcctgttctcttgagt
atgaaatatgccctctgtattctggggcactatacttcgcatatctgtag
cctccccacgcatatttaaaaaataaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117401996_117403123
seq2: B6Ng01-155I15.b_47_1178

seq1  GAATTCCTCTCAGAATAGGAACATGTGGTGCAGTTCCAGCACCAGGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCAGAATAGGAACATGTGGTGCAGTTCCAGCACCAGGGAAG  50

seq1  TTTGAGGCAGGAGGATCAAGAGATTGAGGCCTGCCTGGTTTACATGACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCAGGAGGATCAAGAGATTGAGGCCTGCCTGGTTTACATGACAA  100

seq1  GGTCTGTTTCTAGCCACTAAGTAGAAATAGGGTTAGACTTAGAGATTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTTCTAGCCACTAAGTAGAAATAGGGTTAGACTTAGAGATTATC  150

seq1  CTTCTGTGAGTGAGCAGGAGTATTCCTGCAGGGTAGAGAAGGGGTCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGAGTGAGCAGGAGTATTCCTGCAGGGTAGAGAAGGGGTCACTG  200

seq1  GAGAGATTAATATGAACTTGCTTCAGTTGCGGAGTCAGCCTCTTGAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTAATATGAACTTGCTTCAGTTGCGGAGTCAGCCTCTTGAAGTT  250

seq1  TCACCGCGGCCTTGGCACACTGGGCTTTAGCAAGCCATCTGCCCTTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGCGGCCTTGGCACACTGGGCTTTAGCAAGCCATCTGCCCTTTGAC  300

seq1  CGAGCACTGCACCCAAGGTCACACTAGGATGTGGGAAATAGTGCCTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCACTGCACCCAAGGTCACACTAGGATGTGGGAAATAGTGCCTATTA  350

seq1  CATTTTGTTTCCTTTCTAAATATTTAACAATATAAAAACTATACGTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTTCCTTTCTAAATATTTAACAATATAAAAACTATACGTTTGA  400

seq1  ACTGTTTTTGAAATGCAGGGTTTTAGAAAATGTAACATAAAAACATACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTTGAAATGCAGGGTTTTAGAAAATGTAACATAAAAACATACAT  450

seq1  TTAAAAAAATAAAATTTAGAATGCAATGTCTTTGTGGGTTTAACTTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATAAAATTTAGAATGCAATGTCTTTGTGGGTTTAACTTATCT  500

seq1  GTTGGTAATTTTAAAGTCTTACAAGTTCAGAGTGTCTCGTGTACATAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAATTTTAAAGTCTTACAAGTTCAGAGTGTCTCGTGTACATAAGA  550

seq1  GACGTTTACTGCTCGTTACATAGAGTCTAAATAGAATGTATTTACCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTTTACTGCTCGTTACATAGAGTCTAAATAGAATGTATTTACCTTGT  600

seq1  ATACACACACACACACACACACACACACACACACACACGCACGCACGCAC  650
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT--ACACACACACACACACACACACACACACACACACGCACGCACGCAC  648

seq1  GCACGCACCACACACGCACGCACGCACGCACGCACGCACGCACGCACGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCACCACACACGCACGCACGCACGCACGCACGCACGCACGCACGCA  698

seq1  CGCACGCACGCACACACGCACGTGCTCGAGCATGCTCCTTTGTTTGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACGCACGCACACACGCACGTGCTCGAGCATGCTCCTTTGTTTGTTTG  748

seq1  TTTGAGACAGGATCTCTCTTTCTGGCTGGCCTTGAACTCCGAGATCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAGGATCTCTCTTTCTGGCTGGCCTTGAACTCCGAGATCCACC  798

seq1  TGCCTCTGCCTCCCGAGTGCTGGGTTAGAGGCGTGCTCCTGTTCCTCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTCCCGAGTGCTGGGTTAGAGGCGTGCTCCTGTTCCTCCAC  848

seq1  TCTTGCATAATTTTTATGTTTCTACTAATCCATCTATCATAATGATCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCATAATTTTTATGTTTCTACTAATCCATCTATCATAATGATCACT  898

seq1  GTGTTTAAAGTTTACAGTTTTTGTTGTTACTTGTTTTGTTTTTGAGACAT  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGTTTAAAGTTTACAGTTTTTGTTGTTACTTGTTTTG-TTTTGAGACAT  947

seq1  GGTTTCACAGTGGAGGCTGGGCTGACCTCAAACTTGTGGCTATTCTCCT-  999
      ||||||||||||||||||||||||||||||||||||||||| ||| ||| 
seq2  GGTTTCACAGTGGAGGCTGGGCTGACCTCAAACTTGTGGCT-TTCCCCTG  996

seq1  GTCTCCACCCCTGAGCCCCGAGATCATAGATA-TGC-TGTACCATACCCA  1047
      || ||||||||||||||||||||||||||||| ||| |||||||||||||
seq2  GTTTCCACCCCTGAGCCCCGAGATCATAGATATTGCTTGTACCATACCCA  1046

seq1  GTGAAATCAAGGCTTTTTTT-CTCTAC-TTCAGCCAATA-CTGTCTAACG  1094
      ||| ||||||| |||||||| |||||| ||||||||||| ||||||||||
seq2  GTGGAATCAAGCCTTTTTTTCCTCTACTTTCAGCCAATACCTGTCTAACG  1096

seq1  A-CGGCAGTTGTGTGAATAATGCACCCAC-AATATT  1128
      | || |||||  ||||||||||||||| | ||||||
seq2  ACCGCCAGTTTGGTGAATAATGCACCCCCAAATATT  1132

seq1: chr7_117563329_117564473
seq2: B6Ng01-155I15.g_64_1192 (reverse)

seq1  GTTTTATTTTTAATTATATGCTGGTGGGAGGCTACATGTATATGCG-AGT  49
      ||||||||||| |  |||||| |  |||||||||||   ||||||| |||
seq2  GTTTTATTTTTTA-AATATGC-GTGGGGAGGCTACA--GATATGCGAAGT  46

seq1  ATAAGTGCCCACAGAATACAGAAGAGCATAATTCTCAATACTCAAAGAGA  99
      || ||||||| |||||||||| || ||||| |||   |||||| ||||||
seq2  AT-AGTGCCC-CAGAATACAG-AGGGCATATTTC---ATACTC-AAGAGA  89

seq1  ACAGGATGGCAAAGAACAAGGAACCCAAATTGTTTCTTCTAATTTGGGCT  149
      |||||||||||||| |||| ||||||||||||||||||||||||||||||
seq2  ACAGGATGGCAAAG-ACAA-GAACCCAAATTGTTTCTTCTAATTTGGGCT  137

seq1  CTCATTATTTTATAGGAATGTCATCTCTGTAAGAACATATACTTATTCTG  199
      |||||||||||||||||||||||||||||||||||||||||||   ||||
seq2  CTCATTATTTTATAGGAATGTCATCTCTGTAAGAACATATACT--ATCTG  185

seq1  AAGCCTATAGAAAACTGTTTCTTTCAATTCATTCAGTTATTATTGGATTG  249
      |||||||||||||||||||||||||||||||||||| |||||||||| ||
seq2  AAGCCTATAGAAAACTGTTTCTTTCAATTCATTCAG-TATTATTGGA-TG  233

seq1  CTCGTTATTAATTCCTCTCTGCTTCAATAACATCTAAAAACTGAAAAGGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTATTAATTCCTCTCTGCTTCAATAACATCTAAAAACTGAAAAGGG  283

seq1  AGTGACATATATAGAGAGAATTTTGGTTTCTTAAAAAACCCAGTTATGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACATATATAGAGAGAATTTTGGTTTCTTAAAAAACCCAGTTATGTT  333

seq1  ATGTGAATAGGTTTTTGTTTTAGTCCCAGATGTGGGATAAGAGGCCACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATAGGTTTTTGTTTTAGTCCCAGATGTGGGATAAGAGGCCACCT  383

seq1  AACAGCAGGTGTCATGATTTGCTTCATGCACAGCCAGGCCCTGAGAGCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAGGTGTCATGATTTGCTTCATGCACAGCCAGGCCCTGAGAGCCT  433

seq1  GTGGAGGCTGCTGCCCCCGTGCTGCTCCTGGTCGTTGTTATTGTGGTTTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGGCTGCTGCCCCCGTGCTGCTCCTGGTCGTTGTTATTGTGGTTTG  483

seq1  ATGAGAAGAAATTGAGGTATTCTGATGACGAAGATTGGACTTGCCTCAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAGAAATTGAGGTATTCTGATGACGAAGATTGGACTTGCCTCAAG  533

seq1  GGACTCAACATCCTAATCAGTAGGAAGTAGTCCAAAGAGATGTATGTTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAACATCCTAATCAGTAGGAAGTAGTCCAAAGAGATGTATGTTCC  583

seq1  CTTTCCCTCTAACCTTCTTTCTCTCCTACCTAGTGTTGAAGGTTTGATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTCTAACCTTCTTTCTCTCCTACCTAGTGTTGAAGGTTTGATTA  633

seq1  GGGTGTAATAAAACATTAAAACCCAATAAAATAGCCAAAAACTACATTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTAATAAAACATTAAAACCCAATAAAATAGCCAAAAACTACATTAA  683

seq1  CAGACATAAGTATAAAATTTGGTAATATACGACTATGGGCCTTTAATATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATAAGTATAAAATTTGGTAATATACGACTATGGGCCTTTAATATA  733

seq1  TTGCTCATATTATAAAATCAGTAAAGTAACAAAGTATTTGTCACTAGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATATTATAAAATCAGTAAAGTAACAAAGTATTTGTCACTAGAAA  783

seq1  ACAAGGAAAGAACAAAGAAGTGAGGATTTACATCAGCTAAGGAGCAAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAAGAACAAAGAAGTGAGGATTTACATCAGCTAAGGAGCAAGTG  833

seq1  ACTCCATGGATTTCAGCTCTTTTTTAGCCATAGCAGCCTCAAGACATTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATGGATTTCAGCTCTTTTTTAGCCATAGCAGCCTCAAGACATTGA  883

seq1  TAGTTCAGTAATTAATATATCTTTTGGGGAAAAAAGGTATTTGCAAAATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAGTAATTAATATATCTTTTGGGGAAAAAAGGTATTTGCAAAATG  933

seq1  GGAATAATCTAAAATCACTCAAGATTACCTGTAGAGTACAGTTCATCATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAATCTAAAATCACTCAAGATTACCTGTAGAGTACAGTTCATCATC  983

seq1  CTTATTATGTAGTCAAACTGTTGATGGTCCAGTATTGCCCGGTTCTGCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATGTAGTCAAACTGTTGATGGTCCAGTATTGCCCGGTTCTGCTG  1033

seq1  AACGTGCAAGCCCAGTTCATCAGTGAGACACTGTCTTGCTGCTTTTCCTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCAAGCCCAGTTCATCAGTGAGACACTGTCTTGCTGCTTTTCCTT  1083

seq1  TAAGGGCCCTCAAGGCAGCAGGAAGGGTCTGAGAACAAGAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCCCTCAAGGCAGCAGGAAGGGTCTGAGAACAAGAGAATTC  1129