BAC Information

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BAC

Clone NameB6Ng01-155M03
Chromosome7 (Build37)
Map Location 105,603,579 - 105,726,990
singlet/doubletdoublet
Overlap geneGucy2d, LOC100040721, EG434215, A630091E08Rik
Upstream geneKctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269
Downstream gene2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155M03.bB6Ng01-155M03.g
ACCDH950452DH950453
length1,003897
definitionDH950452|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M03, 5' end.DH950453|Mus musculus domesticus DNA, BAC clone: B6Ng01-155M03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,726,540 - 105,726,990)(105,603,579 - 105,604,477)
sequence
gaattcttaacacccataattgtaccagcataggagaaagcttcactcca
ctgtacaagaaaaagaagctaggcaaagcctaacagactccattaatgaa
acagagaactgagtgcagagagacccaagggagtaagaatattcaaggac
ccacagctcttgatatctgtagactccttaaaggcttagcagggcctgtt
tgtccctatgaggaggtgtcccaaagctagtatgtcccaaagggttagag
aaaattgttactggccaggacagtgcctgttcctgctgccagtcaccggg
atagcttcatgtttcacaaatcatggagctaaagtgctcagttctgctgc
tttggtctagccagtcagatctcaaaacatgcttaaaagaatccaactgt
gggctggagagatggctcagtggttaagagcaccgactgctcttccgaag
gtcctgagttcaaatcccagcaaccacatggtggctcacaaccatctgta
atgagatctgccgccctctggtgcatctgaagacagctacagtgtactta
gatataataataaataaatcttaaaaaaaaaaaaagaatccaactgcttc
caagtaaccatcccagagaaaaagactatatatgtatacacacacacaca
cacatacacacacacacacacacacacaccacatacacacacacacacac
acatacacacacacacacacatacacacacacatacacacacacatacac
acatatacacacacacacacatacacacacatacacacacacacacacat
aaacacacacgtctatcacatagtaagatgctatttacaactgttagcat
taaattttaaaaatgtcaatagttgaagatggctcagtggttaaggcatg
ggctgctcttccagaagaccctggtttgattcccagcacccacaaggcag
tcataattgtctatttctcgggtacagagatctggtgccctttaatggat
ctg
gaattcttcctggtaaagatccagctaggggcacgcgtccgaggaggccc
ggcctgtgagcgttctggatccggctgcaagatgagcctggggccgtgac
aggtgaaatggtgatgaattacacaagctgcacagataattaagtagcag
agattagaactcaggtttcctgcctccgaaggttgttaaacatgaacctg
cggaagcaaacccctagcgacttcttaaagcagatcatcaggcggccagt
tgtggtgaaattaaatcctggcatggattatcgagggtcctggcctgcct
ggatggctacatgaatgtagccctggaacagacagaggtgtatgtaaatg
gacagctgaagaataagtacggagatgtgttcatccgaggaaacaatgtg
ctgtacataagtacacagaagaggcaggcggatgtgaagacaccaggagg
cactgctcttcagagatggatagatgaagtggttttggttctcttactat
cttagttggcctgttttcatggtggtcggtgggggtttgtttgtttgttt
aattgtcattggaataagatagaggtattgcattacagattgactcttaa
gtttttcacacacacacaaaaaaaagatccagctaggatcctgtttccta
ccagtacctccttagcccccaccttttggttgccttgctttgcagacttg
gaagctgaggctcagactagaagttatctacccaggtcacagagttccag
ggaggccaagggacaaacagacctcaggtcgaccaggcaaagactgcccc
ttggccaccctgagtctcaatagaagtctgttactgttcccataaccagg
ctaggcccagttcagaacacagaaaaggcatgctttgggtagacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_105726540_105726990
seq2: B6Ng01-155M03.b_47_496 (reverse)

seq1  CTTCTGGAAGAGCAGCCCATGCCCTTAACCACTGAGCCATCTCTCCAGCC  50
      |||| |||||||||| |  ||| |||||||||||||||||||||||||||
seq2  CTTC-GGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCC  49

seq1  CACAGTTGGATTCTTTTAAGCATGTTTTGAGATCTGACTGGCTAGACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTGGATTCTTTTAAGCATGTTTTGAGATCTGACTGGCTAGACCAA  99

seq1  AGCAGCAGAACTGAGCACTTTAGCTCCATGATTTGTGAAACATGAAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGAACTGAGCACTTTAGCTCCATGATTTGTGAAACATGAAGCTA  149

seq1  TCCCGGTGACTGGCAGCAGGAACAGGCACTGTCCTGGCCAGTAACAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGTGACTGGCAGCAGGAACAGGCACTGTCCTGGCCAGTAACAATTT  199

seq1  TCTCTAACCCTTTGGGACATACTAGCTTTGGGACACCTCCTCATAGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAACCCTTTGGGACATACTAGCTTTGGGACACCTCCTCATAGGGAC  249

seq1  AAACAGGCCCTGCTAAGCCTTTAAGGAGTCTACAGATATCAAGAGCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCCCTGCTAAGCCTTTAAGGAGTCTACAGATATCAAGAGCTGTG  299

seq1  GGTCCTTGAATATTCTTACTCCCTTGGGTCTCTCTGCACTCAGTTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTGAATATTCTTACTCCCTTGGGTCTCTCTGCACTCAGTTCTCTG  349

seq1  TTTCATTAATGGAGTCTGTTAGGCTTTGCCTAGCTTCTTTTTCTTGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAATGGAGTCTGTTAGGCTTTGCCTAGCTTCTTTTTCTTGTACA  399

seq1  GTGGAGTGAAGCTTTCTCCTATGCTGGTACAATTATGGGTGTTAAGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTGAAGCTTTCTCCTATGCTGGTACAATTATGGGTGTTAAGAATT  449

seq1  C  451
      |
seq2  C  450

seq1: chr7_105603579_105604477
seq2: B6Ng01-155M03.g_67_963

seq1  GAATTCTTCCTGGTAAAGATCCAGCTAGGGGCACGCGTCCGAGGAGGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTGGTAAAGATCCAGCTAGGGGCACGCGTCCGAGGAGGCCC  50

seq1  GGCCTGTGAGCGTTCTGGATCCGGCTGCAAGATGAGCCTGGGGCCGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGTGAGCGTTCTGGATCCGGCTGCAAGATGAGCCTGGGGCCGTGAC  100

seq1  AGGTGAAATGGTGATGAATTACACAAGCTGCACAGATAATTAAGTAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAATGGTGATGAATTACACAAGCTGCACAGATAATTAAGTAGCAG  150

seq1  AGATTAGAACTCAGGTTTCCTGCCTCCGAAGGTTGTTAAACATGAACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGAACTCAGGTTTCCTGCCTCCGAAGGTTGTTAAACATGAACCTG  200

seq1  CGGAAGCAAACCCCTAGCGACTTCTTAAAGCAGATCATCAGGCGGCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGCAAACCCCTAGCGACTTCTTAAAGCAGATCATCAGGCGGCCAGT  250

seq1  TGTGGTGAAATTAAATCCTGGCATGGATTATCGAGGGTCCTGGCCTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGAAATTAAATCCTGGCATGGATTATCGAGGGTCCTGGCCTGCCT  300

seq1  GGATGGCTACATGAATGTAGCCCTGGAACAGACAGAGGTGTATGTAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTACATGAATGTAGCCCTGGAACAGACAGAGGTGTATGTAAATG  350

seq1  GACAGCTGAAGAATAAGTACGGAGATGTGTTCATCCGAGGAAACAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTGAAGAATAAGTACGGAGATGTGTTCATCCGAGGAAACAATGTG  400

seq1  CTGTACATAAGTACACAGAAGAGGCAGGCGGATGTGAAGACACCAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATAAGTACACAGAAGAGGCAGGCGGATGTGAAGACACCAGGAGG  450

seq1  CACTGCTCTTCAGAGATGGATAGATGAAGTGGTTTTGGTTCTCTTACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCTTCAGAGATGGATAGATGAAGTGGTTTTGGTTCTCTTACTAT  500

seq1  CTTAGTTGGCCTGTTTTCATGGTGGTCGGTGGGGGTTTGTTTGTTTGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTGGCCTGTTTTCATGGTGGTCGGTGGGGGTTTGTTTGTTTGTTT  550

seq1  AATTGTCATTGGAATAAGATAGAGGTATTGCATTACAGATTGACTCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCATTGGAATAAGATAGAGGTATTGCATTACAGATTGACTCTTAA  600

seq1  GTTTTTCACACACACACAAAAAAAAGATCCAGCTAGGATCCTGTTTCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCACACACACACAAAAAAAAGATCCAGCTAGGATCCTGTTTCCTA  650

seq1  CCAGTACCTCCTTAGCCCCCACCTTTTGGTTGCCTTGCTTTGCAGACTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCTCCTTAGCCCCCACCTTTTGGTTGCCTTGCTTTGCAGACTTG  700

seq1  GAAGCTGAGGCTCAGACTAGAAGTTATCTACCCAGGTCACAGAGTTCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGAGGCTCAGACTAGAAGTTATCTACCCAGGTCACAGAGTTCCAG  750

seq1  GGAGGCCAAGGGACAAACAGACCTCAGGTCGACCAGCCAAAGACTGCCCC  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGAGGCCAAGGGACAAACAGACCTCAGGTCGACCAGGCAAAGACTGCCCC  800

seq1  TGGCCCACCCTGAGTCTCAATAGAAGTCTGTTTACTGTTCCCATTAACCA  850
      | | |||||||||||||||||||||||||| |||||||||||| ||||||
seq2  TTGGCCACCCTGAGTCTCAATAGAAGTCTG-TTACTGTTCCCA-TAACCA  848

seq1  GGCTAGGCCCAGTTCAGAACACAGAAAAGGCATGCATTGGGTAGACACT  899
      ||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGCTAGGCCCAGTTCAGAACACAGAAAAGGCATGCTTTGGGTAGACACT  897