BAC Information

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BAC

Clone NameB6Ng01-156C18
Chromosome7 (Build37)
Map Location 116,185,283 - 116,186,381
singlet/doubletsinglet
Overlap geneRic3
Upstream geneOlfr479, Olfr480, Olfr481, LOC100043059, Olfr482, Olfr483, Olfr484, Olfr485, Olfr486, Olfr487, Olfr1538-ps1, Olfr488, LOC546990, Olfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub
Downstream geneLmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156C18.bB6Ng01-156C18.g
ACCDH950746DH950747
length1,1891,091
definitionDH950746|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C18, 5' end.DH950747|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatcttttaagggggttatttgatt
ttctggagtcccccctcttgagttctttatatatatattggatattagtc
ccctatctgatttaagataggtaaagatcctttcccaatctgttggtggt
ctttttgtcttattgacggtgtcttttgccttgcagaagctttgcagttt
catgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctg
ttctattcaggaattttttccctgtgcccatatcttcgagacttttcccc
actttctcctctataagtgtcagtgtctctggttttatgtgaagttcctt
gatccacttagatttgaccttagtacaaggagagaggaatgggtccattc
gaattcttctacatgataacaaccagttgtgccagcaccatttgttgaaa
atgctgtctttcttccactggatggttttagctcccttgtcgaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccatt
ggtctacttgtctgtcactataccagtaccatgtggtttttatcacaatt
gctctgtagtaaagctttaggtcaggcatggtgattccaccagaggtact
tttatccttgagaagagtttttgctgtcctaggttttttgttattccaga
tgaatttgcagattgctctttctaattcgttgaagaattgagttggaatt
ttgatggggattacattgaatctgtagattgcttttggcaagatagccat
ttttacaatgttgatcctgccaatccatgagcatgggagatctttccatc
ttctgagatcttctttaatttctttcttcagagacttgaagtttttatca
tacagatctttcacttccttagttagagtcacgccaagatatttatatat
ttgtgactattgagaaggtgttgtttcctaattctttctcagctgtttat
tctctgttgtaaagaaaggccatgacttgttgagtaattttaatcaacta
ctcactgaagctcagttagcgattctctgggattttagggtacttatata
ccatccatcactggctaaggatatttggactcctcttccatttgatatcc
cttgtaccgtagtgtgtctaatgcacattccttgagaaa
gaattcagtcacagccattggttctgtctgtgtaaacatgagtgtgtttt
tacactacttttgcccagcagtttgtgaaccttccttcagtgagtagatg
tttcctttcgtccctttttattaatgctttaacacgtatctttctttgat
ttcatgatctagtaattaaaaatcaagtacactgatcaacctccacaatt
tctcatatttttcatttctttgtcatttatatcttgttacagaattcttt
aatgtgaacttctaatatatggatttgattttcgggcatattgatcttga
tcttgtgacctttattcatgggtataaatttttcatcttgtgatcatgcc
tttctgtttacagtagttctgttttctgtttgctccatatcctcttgaat
agggataagttatcatgttaaatcctatttcctgtgttgactattttatt
agtggcttctgtataatttgcttagtttggttctcatgttttgaattact
gtgtttttcccagaagcaatgactctttgttgtttgcttatatttcttaa
agatattttaaagtattaagtaaaatcatttgacatgagctacttcagca
ttcaggtgggtcattagtgatagttttcgatttaacattagttttactta
catataaatattgtttttgagttttcaatttatatggggtatcttctatt
tcttttcttcttcactctatgcccttagagatgcaataaatgtctcaaag
ctagcacagagctgggcctttttatttttaaaatcttttcattattatgt
tgattagagaatttaactcatttatattcaatgtaacaattggtaggtta
cgacttactagtgtcatttaatattttactacatttgtttatgtttgtat
ttgtatgtgtgttcatatgcatgtgggtggtcaccatagtgtgcatgtgg
aggtcagacaccctgtcaaagttgattctgtcctcaactgagttggtctt
gggatggaccccaggttgtagacttgtggtaaggattgctttaacctaat
ggagcatcctactagccctcattatattggagtttttaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116185283_116186381
seq2: B6Ng01-156C18.g_65_1155 (reverse)

seq1  TTTTAAAAACTACCAAAATAATAGAGGCTAGTGAGATAGCTCCATAGGGT  50
      ||||||||||| |||| |||||   |||||||  ||| |||||||  |||
seq2  TTTTAAAAACT-CCAATATAATGAGGGCTAGTAGGAT-GCTCCATTAGGT  48

seq1  AAAAGCACTTACCTTACCACCAAGTCTAACAACCTGGGGGTCCATCCCCA  100
       |||||| |  |||||||| ||||||| ||||||| ||||||||| ||||
seq2  TAAAGCAAT--CCTTACCA-CAAGTCT-ACAACCT-GGGGTCCAT-CCCA  92

seq1  AGACCAACTCAGTGGAAGGACAGAATCAACTTTGACAGGGTGTCTGACCT  150
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  AGACCAACTCAGTTG-AGGACAGAATCAACTTTGACAGGGTGTCTGACCT  141

seq1  CCACATGCACACTATGGTGTACACCCACATGCATATGAACACACATACAA  200
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  CCACATGCACACTATGGTGACCACCCACATGCATATGAACACACATACAA  191

seq1  ATACAAACATAAACAAATGTAGTAAAATATTAAATGACACTAGTAAGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACATAAACAAATGTAGTAAAATATTAAATGACACTAGTAAGTCG  241

seq1  TAACCTACCAATTGTTACATTGAATATAAATGAGTTAAATTCTCTAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTACCAATTGTTACATTGAATATAAATGAGTTAAATTCTCTAATCA  291

seq1  ACATAATAATGAAAAGATTTTAAAAATAAAAAGGCCCAGCTCTGTGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATAATGAAAAGATTTTAAAAATAAAAAGGCCCAGCTCTGTGCTAG  341

seq1  CTTTGAGACATTTATTGCATCTCTAAGGGCATAGAGTGAAGAAG-AAAGA  399
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTGAGACATTTATTGCATCTCTAAGGGCATAGAGTGAAGAAGAAAAGA  391

seq1  AATAGAAGATACCCCATATAAATTGAAAACTCAAAAACAATATTTATATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAGATACCCCATATAAATTGAAAACTCAAAAACAATATTTATATG  441

seq1  TAAGTAAAACTAATGTTAAATCGAAAACTATCACTAATGACCCACCTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAAACTAATGTTAAATCGAAAACTATCACTAATGACCCACCTGAA  491

seq1  TGCTGAAGTAGCTCATGTCAAATGATTTTACTTAATACTTTAAAATATCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGTAGCTCATGTCAAATGATTTTACTTAATACTTTAAAATATCT  541

seq1  TTAAGAAATATAAGCAAACAACAAAGAGTCATTGCTTCTGGGAAAAACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATATAAGCAAACAACAAAGAGTCATTGCTTCTGGGAAAAACAC  591

seq1  AGTAATTCAAAACATGAGAACCAAACTAAGCAAATTATACAGAAGCCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTCAAAACATGAGAACCAAACTAAGCAAATTATACAGAAGCCACT  641

seq1  AATAAAATAGTCAACACAGGAAATAGGATTTAACATGATAACTTATCCCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAGTCAACACAGGAAATAGGATTTAACATGATAACTTATCCCT  691

seq1  ATTCAAGAGGATATGGAGCAAACAGAAAACAGAACTACTGTAAACAGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGAGGATATGGAGCAAACAGAAAACAGAACTACTGTAAACAGAAA  741

seq1  GGCATGATCACAAGATGAAAAATTTATACCCATGAATAAAGGTCACAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGATCACAAGATGAAAAATTTATACCCATGAATAAAGGTCACAAGA  791

seq1  TCAAGATCAATATGCCCGAAAATCAAATCCATATATTAGAAGTTCACATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATCAATATGCCCGAAAATCAAATCCATATATTAGAAGTTCACATT  841

seq1  AAAGAATTCTGTAACAAGATATAAATGACAAAGAAATGAAAAATATGAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTCTGTAACAAGATATAAATGACAAAGAAATGAAAAATATGAGA  891

seq1  AATTGTGGAGGTTGATCAGTGTACTTGATTTTTAATTACTAGATCATGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGGAGGTTGATCAGTGTACTTGATTTTTAATTACTAGATCATGAA  941

seq1  ATCAAAGAAAGATACGTGTTAAAGCATTAATAAAAAGGGACGAAAGGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGAAAGATACGTGTTAAAGCATTAATAAAAAGGGACGAAAGGAAA  991

seq1  CATCTACTCACTGAAGGAAGGTTCACAAACTGCTGGGCAAAAGTAGTGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACTCACTGAAGGAAGGTTCACAAACTGCTGGGCAAAAGTAGTGTA  1041

seq1  AAAACACACTCATGTTTACACAGACAGAACCAATGGCTGTGACTGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACACTCATGTTTACACAGACAGAACCAATGGCTGTGACTGAATTC  1091