BAC Information

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BAC

Clone NameB6Ng01-156F24
Chromosome7 (Build37)
Map Location 109,760,517 - 109,849,358
singlet/doubletdoublet
Overlap geneOlfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557
Upstream geneClpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552
Downstream geneOlfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156F24.bB6Ng01-156F24.g
ACCDH950896DH950897
length5771,182
definitionDH950896|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F24, 5' end.DH950897|Mus musculus domesticus DNA, BAC clone: B6Ng01-156F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,848,776 - 109,849,358)(109,760,517 - 109,761,732)
sequence
atcagagtagtaactatgtgagcaaggtaaccaaaactatagggagaatc
gtttaaaatatttagaagtgatactacaaagtgatagcacaggacaaaga
ttggtggcttcctggcagtcagaatggagggcttcatagttcacctcttt
attgagaatacagaagaccatacctcaacattagcaagttgggacaaagc
ttcaaagcatatctaaaacaattgatctagctagcatcaaggtatcaaga
tgccttctgggaacaaagcaggagagtaactggtgaggagctgtcataga
agaggaggcagaagactgggagagcctatgggtgggaaggagtgctatga
gtggctgtcttctggctgctacagtcgggaacacagagcagatatgacca
tttgcaaaaactttacacaaaatacaaaatgttaaaaacatgaaagtagg
aagagaactagctggggacaaggaccctgtaggagtgggagagggggtaa
gagagagtaatgtggatagacatcacaatgtcttgtactcatctatgaag
ttgacaaaaggaaatgctaaataaaca
gaattcttcagagctcattcccttctatactgttgaaacaaaccccttaa
tcacaaaacatacagctaagaccacggttgacaggaggacttaatgtttg
aatggcactaaggccacactattgcgtctggtgggtgctctcaggagatg
agcccttggtggagcaggagcataaatgcagccacttttgttatctttat
cctcagccatccaattccatatgatgatggagatgggtttagcctatggg
agactcaacagattatctaggaagaaatgcctagcgttggattgtgcgca
gctattctgtcataaagttcttagtattaagctgtatttcaaaagttcaa
actttccttatgtacaattacaaggtattagcagaacttatgcactataa
tagtggaactaggtcaaaatttcccccaacattcctcctaccatggggtt
tgagtgttatagtcctttgtcatctcctatgcctgagccaacctaaaatc
taaaacagatttccagctctgagaagttaagtgcgtatttcctacaagtg
tcttttcatgtaaaagccagtatataaaactacttttagtgctaaaatta
tatatataactccctatcttttctcagtaacttgattcaagtttggcact
gtaatcagagaccttggtagaataggagaacagctgctctttgctgagac
aatagataaagattaataaatgttatcaagccaatcttaatattagagat
agatgaatgaaatcaaatttgggcctggtcaggggtctacataaatatta
gagacttgtgctattccaagtttctcatttattttatttttaaatataca
atgaacagaacattctagttctggcttcaccatttgttttcttgaatata
tttttccaaatattaaatgatatctttttaacctaaggtcactattttgg
tctttaaaagctcatcatatcaaaacttgaatcaatgacttagatttgaa
aaaaccttagacataaaacagactaccatgatcctgagcactagagtcag
gagtgactgcttcaaatcatactaaaatttttatgtttggaacaattcct
aagggacttgcatagtaggccattatgccaaaagggtagtcttaagcaaa
gtgcaggaaagttccaaatgacatgagagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109848776_109849358
seq2: B6Ng01-156F24.b_45_627 (reverse)

seq1  TGTTTATTTAGCATTTCCTTTTGTCAACTTCATAGATGAGTACAAGACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATTTAGCATTTCCTTTTGTCAACTTCATAGATGAGTACAAGACAT  50

seq1  TGTGATGTCTATCCACATTACTCTCTCTTACCCCCTCTCCCACTCCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTCTATCCACATTACTCTCTCTTACCCCCTCTCCCACTCCTACA  100

seq1  GGGTCCTTGTCCCCAGCTAGTTCTCTTCCTACTTTCATGTTTTTAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTTGTCCCCAGCTAGTTCTCTTCCTACTTTCATGTTTTTAACATT  150

seq1  TTGTATTTTGTGTAAAGTTTTTGCAAATGGTCATATCTGCTCTGTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTGTGTAAAGTTTTTGCAAATGGTCATATCTGCTCTGTGTTCC  200

seq1  CGACTGTAGCAGCCAGAAGACAGCCACTCATAGCACTCCTTCCCACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTGTAGCAGCCAGAAGACAGCCACTCATAGCACTCCTTCCCACCCAT  250

seq1  AGGCTCTCCCAGTCTTCTGCCTCCTCTTCTATGACAGCTCCTCACCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTCCCAGTCTTCTGCCTCCTCTTCTATGACAGCTCCTCACCAGTT  300

seq1  ACTCTCCTGCTTTGTTCCCAGAAGGCATCTTGATACCTTGATGCTAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCTGCTTTGTTCCCAGAAGGCATCTTGATACCTTGATGCTAGCTA  350

seq1  GATCAATTGTTTTAGATATGCTTTGAAGCTTTGTCCCAACTTGCTAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATTGTTTTAGATATGCTTTGAAGCTTTGTCCCAACTTGCTAATGT  400

seq1  TGAGGTATGGTCTTCTGTATTCTCAATAAAGAGGTGAACTATGAAGCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATGGTCTTCTGTATTCTCAATAAAGAGGTGAACTATGAAGCCCT  450

seq1  CCATTCTGACTGCCAGGAAGCCACCAATCTTTGTCCTGTGCTATCACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGACTGCCAGGAAGCCACCAATCTTTGTCCTGTGCTATCACTTT  500

seq1  GTAGTATCACTTCTAAATATTTTAAACGATTCTCCCTATAGTTTTGGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATCACTTCTAAATATTTTAAACGATTCTCCCTATAGTTTTGGTTA  550

seq1  CCTTGCTCACATAGTTACTACTCTGATGAATTC  583
      |||||||||||||||||||||||||||||||||
seq2  CCTTGCTCACATAGTTACTACTCTGATGAATTC  583

seq1: chr7_109760517_109761732
seq2: B6Ng01-156F24.g_65_1246

seq1  GAATTCTTCAGAGCTCATTCCCTTCTATACTGTTGAAACAAACCCCTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGAGCTCATTCCCTTCTATACTGTTGAAACAAACCCCTTAA  50

seq1  TCACAAAACATACAGCTAAGACCACGGTTGACAGGAGGACTTAATGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAACATACAGCTAAGACCACGGTTGACAGGAGGACTTAATGTTTG  100

seq1  AATGGCACTAAGGCCACACTATTGCGTCTGGTGGGTGCTCTCAGGAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCACTAAGGCCACACTATTGCGTCTGGTGGGTGCTCTCAGGAGATG  150

seq1  AGCCCTTGGTGGAGCAGGAGCATAAATGCAGCCACTTTTGTTATCTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGGTGGAGCAGGAGCATAAATGCAGCCACTTTTGTTATCTTTAT  200

seq1  CCTCAGCCATCCAATTCCATATGATGATGGAGATGGGTTTAGCCTATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCCATCCAATTCCATATGATGATGGAGATGGGTTTAGCCTATGGG  250

seq1  AGACTCAACAGATTATCTAGGAAGAAATGCCTAGCGTTGGATTGTGCGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAACAGATTATCTAGGAAGAAATGCCTAGCGTTGGATTGTGCGCA  300

seq1  GCTATTCTGTCATAAAGTTCTTAGTATTAAGCTGTATTTCAAAAGTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCTGTCATAAAGTTCTTAGTATTAAGCTGTATTTCAAAAGTTCAA  350

seq1  ACTTTCCTTATGTACAATTACAAGGTATTAGCAGAACTTATGCACTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTATGTACAATTACAAGGTATTAGCAGAACTTATGCACTATAA  400

seq1  TAGTGGAACTAGGTCAAAATTTCCCCCAACATTCCTCCTACCATGGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGAACTAGGTCAAAATTTCCCCCAACATTCCTCCTACCATGGGGTT  450

seq1  TGAGTGTTATAGTCCTTTGTCATCTCCTATGCCTGAGCCAACCTAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTTATAGTCCTTTGTCATCTCCTATGCCTGAGCCAACCTAAAATC  500

seq1  TAAAACAGATTTCCAGCTCTGAGAAGTTAAGTGCGTATTTCCTACAAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGATTTCCAGCTCTGAGAAGTTAAGTGCGTATTTCCTACAAGTG  550

seq1  TCTTTTCATGTAAAAGCCAGTATATAAAACTACTTTTAGTGCTAAAATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCATGTAAAAGCCAGTATATAAAACTACTTTTAGTGCTAAAATTA  600

seq1  TATATATAACTCCCTATCTTTTCTCAGTAACTTGATTCAAGTTTGGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAACTCCCTATCTTTTCTCAGTAACTTGATTCAAGTTTGGCACT  650

seq1  GTAATCAGAGACCTTGGTAGAATAGGAGAACAGCTGCCCTTTGCTGAGAC  700
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTAATCAGAGACCTTGGTAGAATAGGAGAACAGCTGCTCTTTGCTGAGAC  700

seq1  AATAGATAAAGATTAATAAATGTTATCAAGCCAATCTTAATATTAGAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAAAGATTAATAAATGTTATCAAGCCAATCTTAATATTAGAGAT  750

seq1  AGATGAATGAAATCAAATTTGGGCCTGGTCAGGGGTCTACATAAATATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATGAAATCAAATTTGGGCCTGGTCAGGGGTCTACATAAATATTA  800

seq1  GAGACTTGTGCTATTCCAAGTTTCTCATTTATTTTATTTTTAAATATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTGTGCTATTCCAAGTTTCTCATTTATTTTATTTTTAAATATACA  850

seq1  ATGAACAGAACATTCTAGTTCTGGCTTCACCATTTGTTTTCTTGAATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACAGAACATTCTAGTTCTGGCTTCACCATTTGTTTTCTTGAATATA  900

seq1  TTTTTCCAAAATATTAAAATGATATCTTTTTAACCTAAGGTCACCTATTT  950
      ||||||| ||||||| ||||||||||||||||||||||||||| ||||||
seq2  TTTTTCC-AAATATT-AAATGATATCTTTTTAACCTAAGGTCA-CTATTT  947

seq1  TGGCCTTTAAAAGCTCATCATAATTCAAAAACTTGAATCCAAATGACTTA  1000
      ||| ||||||||||||||||||  || ||||||||||||  |||||||||
seq2  TGGTCTTTAAAAGCTCATCATA--TC-AAAACTTGAATC--AATGACTTA  992

seq1  GAATTTGAAAAAAACCTTAGAACAT-AAACAGACATACCCATGATCCTGA  1049
      | ||||| |||||||||||| |||| |||||||| || ||||||||||| 
seq2  G-ATTTG-AAAAAACCTTAG-ACATAAAACAGAC-TA-CCATGATCCTG-  1036

seq1  AGCACTAGAGTCAGGAGTGACTGCCTTTTCAAATGCATTACTAAAATTTT  1099
      ||||||||||||||||||||||||   ||||||| || ||||||||||||
seq2  AGCACTAGAGTCAGGAGTGACTGC---TTCAAAT-CA-TACTAAAATTTT  1081

seq1  TATGTTTGGAACAAATTTCCCTATGGAACTTTGCAATAAGTAAG-CACTA  1148
      ||||||||||||||   | |||| || || |||||   |||| | || ||
seq2  TATGTTTGGAACAA---TTCCTAAGGGAC-TTGCA--TAGTAGGCCATTA  1125

seq1  TAGCAAAAAGGTTAAGTCATATAGCAAAAAGTAGCAAGAAAAGTTCCCCA  1198
      |  ||||| |||  |||| || |||  ||||| || || ||||||||   
seq2  TGCCAAAAGGGT--AGTCTTA-AGC--AAAGT-GC-AGGAAAGTTCC---  1165

seq1  AAAATGACATGAAAGATT  1216
       ||||||||||| |||||
seq2  -AAATGACATGAGAGATT  1182