BAC Information

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BAC

Clone NameB6Ng01-156H11
Chromosome7 (Build37)
Map Location 38,730,237 - 38,898,066
singlet/doubletdoublet
Overlap geneC80913, Ccne1
Upstream geneLOC100043874, Zfp536, LOC100043453, EG627844
Downstream gene1600014C10Rik, Plekhf1, Pop4, LOC668519, LOC100043464, 1700010N08Rik, EG627975, EG625594, EG627983, EG434171, LOC100043467
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156H11.bB6Ng01-156H11.g
ACCDH950964DH950965
length1,151656
definitionDH950964|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H11, 5' end.DH950965|Mus musculus domesticus DNA, BAC clone: B6Ng01-156H11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,730,237 - 38,731,420)(38,897,411 - 38,898,066)
sequence
gaattctcagaccaggaatctgaaagtgagatttatatcctaaggatatg
aatgggtaaggtgggtaaatgaaggaattgagtaatgtaagtagacacga
aagtaccaaaaatgaccagaaatgcagtactcgtgacgagaaagaatgcc
tgttggatccattggtaaactgatatggacaacaggctgagctgaaagac
accttggcagaaatctcaaacttgaaaagtaaactgagagatcaatagaa
aagccaagaattatgaatatctacaaacatgcgcaaaggagagattcaca
aaggaagagaaaaagaagcagaaagctactgaaggtcatgactgaaaaat
taatgtcagacactaaatcatacactcaagttcagagagggaaaaaaaga
ggtaggtaaacccaacacttgggaagctgaggcaggggaatcaaggtcag
cctgggctatgtagaaagttgctgtctcaaaaacaatcaagaatagttga
cagatagggatctaactgacaaaaaggaagcacagataaataacagcaag
taggataaatgcacaaaacccatatttttcttttttgagacccaccatac
caggcatatgatttatctcattccaactacaaaacaaaaagcaaacacaa
aacaaaacaaacaaacaaacaaacaaaaacaaagataaagatccagaaag
aagccacaggggaaaacagacatctgtaggaagcaccactaagaactaca
tctggtgtctcagaaatcatgcaaggagaacgaggtgaggtatttaaagt
cctgagaaggagctctccaactcagaattctgtgtggtagaaacactctg
aaaccaaaagacaaatacttcctctaacaagaactggagagaactggctg
tcaggaagcctgcaaagtagttcctcggggagaagcagacagtgccctcc
acaacgagtatctatacagtgagcacaatggaagccgtgtgtgcggtgct
gcagaactctcgaccacaaaagcttgtgactacacaggaacagatgggga
cgtgctgtcttctttgtatgtccacacccatgaatgatagagctaacgtg
attgggtagcgtaatgttgaggttctgacaacaataaaatgggagccagg
a
gaattccttcctaggtggggtttcaaagccagacaagcaaagagaacagg
ttggtccctaaattagaaataaagatatggggcaaaatgacaatcataac
aatactaagagtagtaatgaataacggtgatgatgatgatggtggtggtg
atgacgatgataaagatgcgaaacggggagcttcctgcagttgttgtgca
cagatgtgggctcaactttgccaaattattccattgtcccacgagtcgga
aaccctcatgcatacaggaattcacatttttgccgtttttcagtgggctg
ccagcacctgtctgtgtgtaacttctgttggttgccaggccgattgtaag
tggattccaacgtgacagatgacagcgactgagggatgttaatagactta
ggcctggcacccacagaggaatgtgtccctggcttcgctgacctagtggg
tgaggaccgctgccctggggattccgaggcttgctgcaaggcctgaccag
ttgctcactctctcactcactcatgacaaccatgattttctgtggcataa
gataagaaacccaatcccaactaactaagacaatacttgaaaaaaattga
ttggttccagcatccggaatttcccagtaatccagccttaagcttgattg
ggacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_38730237_38731420
seq2: B6Ng01-156H11.b_45_1195

seq1  GAATTCTCAGACCAGGAATCTGAAAGTGAGATTTATATCCTAAGGATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGACCAGGAATCTGAAAGTGAGATTTATATCCTAAGGATATG  50

seq1  AATGGGTAAGGTGGGTAAATGAAGGAATTGAGTAATGTAAGTAGACACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTAAGGTGGGTAAATGAAGGAATTGAGTAATGTAAGTAGACACGA  100

seq1  AAGTACCAAAAATGACCAGAAATGCAGTACTCGTGACGAGAAAGAATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCAAAAATGACCAGAAATGCAGTACTCGTGACGAGAAAGAATGCC  150

seq1  TGTTGGATCCATTGGTAAACTGATATGGACAACAGGCTGAGCTGAAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGATCCATTGGTAAACTGATATGGACAACAGGCTGAGCTGAAAGAC  200

seq1  ACCTTGGCAGAAATCTCAAACTTGAAAAGTAAACTGAGAGATCAATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGCAGAAATCTCAAACTTGAAAAGTAAACTGAGAGATCAATAGAA  250

seq1  AAGCCAAGAATTATGAATATCTACAAACATGCGCAAAGGAGAGATTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAAGAATTATGAATATCTACAAACATGCGCAAAGGAGAGATTCACA  300

seq1  AAGGAAGAGAAAAAGAAGCAGAAAGCTACTGAAGGTCATGACTGAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAGAAAAAGAAGCAGAAAGCTACTGAAGGTCATGACTGAAAAAT  350

seq1  TAATGTCAGACACTAAATCATACACTCAAGTTCAGAGAGGGAAAAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCAGACACTAAATCATACACTCAAGTTCAGAGAGGGAAAAAAAGA  400

seq1  GGTAGGTAAACCCAACACTTGGGAAGCTGAGGCAGGGGAATCAAGGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGTAAACCCAACACTTGGGAAGCTGAGGCAGGGGAATCAAGGTCAG  450

seq1  CCTGGGCTATGTAGAAAGTTGCTGTCTCAAAAACAATCAAGAATAGTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCTATGTAGAAAGTTGCTGTCTCAAAAACAATCAAGAATAGTTGA  500

seq1  CAGATAGGGATCTAACTGACAAAAAGGAAGCACAGATAAATAACAGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGGGATCTAACTGACAAAAAGGAAGCACAGATAAATAACAGCAAG  550

seq1  TAGGATAAATGCACAAAACCCATATTTTTCTTTTTTGAGACCCACCATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATAAATGCACAAAACCCATATTTTTCTTTTTTGAGACCCACCATAC  600

seq1  CAGGCATATGATTTATCTCATTCCAACTACAAAACAAAAAGCAAACACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATATGATTTATCTCATTCCAACTACAAAACAAAAAGCAAACACAA  650

seq1  AACAAAACAAACAAACAAACAAACAAAAACAAAGATAAAGATCCAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAACAAACAAACAAACAAAAACAAAGATAAAGATCCAGAAAG  700

seq1  AAGCCACAGGGGAAAACAGACATCTGTAGGAAGCACCACTAAGAACTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACAGGGGAAAACAGACATCTGTAGGAAGCACCACTAAGAACTACA  750

seq1  TCTGGTGTCTCAGAAATCATGCAAGGAGAACGAGGTGAGGTATTTAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTGGTGTCTCAGAAATCATGCAAGGAGAACGAGGTGAGGTATTTAAAGT  800

seq1  CCTGAGAAGGAGCTCTCCAACTCAGAATTCTGTGTGGTAGAAACACTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGAAGGAGCTCTCCAACTCAGAATTCTGTGTGGTAGAAACACTCTG  850

seq1  AAACCAAAAGACAAATACTTCCTCTAACAAGAACTGGAGAGAACTGGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAAGACAAATACTTCCTCTAACAAGAACTGGAGAGAACTGGCTG  900

seq1  TCAGGAAGCCTGCAAAGTAGTTCCTCGGGGAGAAGGCAGACAGTGCCCTC  950
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAGGAAGCCTGCAAAGTAGTTCCTCGGGGAGAA-GCAGACAGTGCCCTC  949

seq1  CAACAACGAGTATCTATACAGTGAGCACAATGGAAGCCGTGTGTGCGGGT  1000
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  C-ACAACGAGTATCTATACAGTGAGCACAATGGAAGCCGTGTGTGC-GGT  997

seq1  GCTGCAGAAACTCCTCGGACCAACAAAAAGCCTGTGACTACACAAGGGAC  1050
      ||||||| |||| ||| |||||   |||||| ||||||||||| ||| ||
seq2  GCTGCAG-AACT-CTC-GACCA--CAAAAGCTTGTGACTACAC-AGGAAC  1041

seq1  AGGATGGGGGACGGTGGCCTGTCTTCTCTGTAGTGTCACACAACCCATGA  1100
      | ||| |||||| |||  ||||||||| |||| |||| ||| ||||||||
seq2  A-GAT-GGGGAC-GTG--CTGTCTTCTTTGTA-TGTC-CAC-ACCCATGA  1083

seq1  CATGAATAGAGCTAACAGTTGATTGGGTTAGCCGTAGATGTTTGAGGGTT  1150
       ||| |||||||||||   |||||||| ||| |||| ||| |||| ||||
seq2  -ATG-ATAGAGCTAAC--GTGATTGGG-TAG-CGTA-ATG-TTGA-GGTT  1124

seq1  CTGACAACCAATAAAAAAAAGTGGGAAGCCAGGA  1184
      ||||||| ||||||||     |||| ||||||||
seq2  CTGACAA-CAATAAAA-----TGGG-AGCCAGGA  1151

seq1: chr7_38897411_38898066
seq2: B6Ng01-156H11.g_69_724 (reverse)

seq1  GTGT-CCAATCAAGCTTAAGGCTGGATTACTGGGAACTTCCTGGATGCTG  49
      |||| ||||||||||||||||||||||||||||||| |||| ||||||||
seq2  GTGTCCCAATCAAGCTTAAGGCTGGATTACTGGGAAATTCC-GGATGCTG  49

seq1  GAACCAATCAATTATTTTCAAGTATTGACTTAGCTAGTTGGGATTGGGTT  99
      ||||||||||||| ||||||||||||| ||||| ||||||||||||||||
seq2  GAACCAATCAATTTTTTTCAAGTATTGTCTTAGTTAGTTGGGATTGGGTT  99

seq1  TCTTATCTTATGCCACAGAAAATCATGGTTGTCATGAGTGAGTGAGAGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATCTTATGCCACAGAAAATCATGGTTGTCATGAGTGAGTGAGAGAG  149

seq1  TGAGCAACTGGTCAGGCTTTGCAGCAAGCCTCCGAATCCCCAGGGCAGCG  199
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  TGAGCAACTGGTCAGGCCTTGCAGCAAGCCTCGGAATCCCCAGGGCAGCG  199

seq1  GTCCTCACCCACTAGGTCAGCGAAGCCAGGGACACATTCCTCTGTGGGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACCCACTAGGTCAGCGAAGCCAGGGACACATTCCTCTGTGGGTG  249

seq1  CCAGGCCTAAGTCTATTAACATCCCTCAGTCGCTGTCATCTGTCACGTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTAAGTCTATTAACATCCCTCAGTCGCTGTCATCTGTCACGTTG  299

seq1  GAATCCACTTACAATCGGCCTGGCAACCAACAGAAGTTACACACAGACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACTTACAATCGGCCTGGCAACCAACAGAAGTTACACACAGACAG  349

seq1  GTGCTGGCAGCCCACTGAAAAACGGCAAAAATGTGAATTCCTGTATGCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGCAGCCCACTGAAAAACGGCAAAAATGTGAATTCCTGTATGCAT  399

seq1  GAGGGTTTCCGACTCGTGGGACAATGGAATAATTTGGCAAAGTTGAGCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTTCCGACTCGTGGGACAATGGAATAATTTGGCAAAGTTGAGCCC  449

seq1  ACATCTGTGCACAACAACTGCAGGAAGCTCCCCGTTTCGCATCTTTATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGTGCACAACAACTGCAGGAAGCTCCCCGTTTCGCATCTTTATCA  499

seq1  TCGTCATCACCACCACCATCATCATCATCACCGTTATTCATTACTACTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCATCACCACCACCATCATCATCATCACCGTTATTCATTACTACTCT  549

seq1  TAGTATTGTTATGATTGTCATTTTGCCCCATATCTTTATTTCTAATTTAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTGTTATGATTGTCATTTTGCCCCATATCTTTATTTCTAATTTAG  599

seq1  GGACCAACCTGTTCTCTTTGCTTGTCTGGCTTTGAAACCCCACCTAGGAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAACCTGTTCTCTTTGCTTGTCTGGCTTTGAAACCCCACCTAGGAA  649

seq1  GGAATTC  656
      |||||||
seq2  GGAATTC  656