BAC Information

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BAC

Clone NameB6Ng01-157B13
Chromosome7 (Build37)
Map Location 105,702,643 - 105,703,737
singlet/doubletsinglet
Overlap geneA630091E08Rik
Upstream gene1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca, Tsku, LOC100040269, Gucy2d, LOC100040721, EG434215
Downstream gene2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157B13.bB6Ng01-157B13.g
ACCDH951424DH951425
length1,0611,224
definitionDH951424|Mus musculus domesticus DNA, BAC clone: B6Ng01-157B13, 5' end.DH951425|Mus musculus domesticus DNA, BAC clone: B6Ng01-157B13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgactggtgaggccaagggatgtaacccagaggttgagtaga
cagggcccgagtggataatgggcagccaatctcctgtgaggcctgcttct
gccgccgactcaggacatctgggcaggctgggcaggccttggtgttctcc
agtccagctctgttgcagacgtaggacctgccttggggaaggcagagagc
acaagactacagggagaacagaggcagacaggacctaggctggtcctcct
agctcatggttcagtgaggtttccctcaaaggtcccctcagaaacctggt
ttcctagaaccaggttgtatggtagctggaagctacacaatgccaaggaa
gaggccaggggccccaggggaggagggactggtgtctgaacctgggctgg
gccacgttttgtgttatagtcatacctgcccaggactgccagctctgatg
gggaccttctgaacagggccttgggtggccgggtctgcacatgccgcttt
ggtatctctgtagccagtctccctctcttgggattcttttcaggtcatgt
ttcttcttcctcttcctttcttcttgctgcctctctattctgggatgacc
ttgaacttgttatttagccaagaaaaaccccgaagctttggtccacttac
cctcacctcctgcatgctgggattacatacagtgcaccatctgactccat
atctgtccctattttgctctcatggatgtcgcttagtctgatggggcctc
ctggaccagcttctgtccttgcattatagatacctcacttgttctgttgg
gtcccccagtctttgctattctcttggccacagtgttactccatcctacc
ttcttccatccttccaatgccatggggtcagttggttcctttcttccctt
cccctcacatccccatgtccacctctggtagcaattactctgagttagaa
tggaatccttcaaggccaaacaactcatgagagcagttggcaacaaagtc
ctcaagaaactagtcgcctttggtcatgggagtgtgtgcatatggtgtgt
ggtgtgtgtgt
gaattctttgatgattcattcattatttagtactgagttgtccaatctcc
atcttatgtagtttctcttgctactgatttatggttttatcccattatta
tcagatagaatagataaaattatttcagggttcttttttgttaacagttg
ctttgtgtcctaaaatgcagccaattagtcgtccactgttactgtgttta
gatcaatcagtgcatttacatccagtgtggactgttttacaaggtcagat
gtgccaatggttggtgcatgtatattcagatttgcagtagcctcctcaga
ggtcatttctttatcaaacattctgactttctttatctcttctgactttt
tgaagtctatttagccagatgatagaattgttagggtcacctgctttcta
gttctattaacttggaatgtcttttattatcctttcaccaaaaggttgtt
tttgttagtgaggcatgtttcatatagacaacaaatagatgggtgttgtt
gtttttgttgttttaaatctaatctgttaatctatcctttcaattgatga
attgaagctgttagcatccagcattgttattgaaatgtatgcattcattt
ctgttactttgttatttttgtaatatttgatcctttcccaattctaaatt
gcttatatatttttctattgtagtttattctttctcatgtccccatggat
aagtttatccttcccatttgtgtattgtgctagctcagtggtgataaatg
tctctacttttgtttttatatagaacgataatatgaaagatagctttgct
gggtataataatccatgttctcaggtctatctcaataatagcagatttct
caacagaaattctaagctaagaggttatggactatatttcaatctattgc
ttattattatgatagacctgtcccagatgtgacttttggtgctagctttg
taactttaatatacatctttgttctgtacatttatattctactataatat
gacatgagatgtcttgtctgtttgcattctaatgcctttgcatttgaata
gcctactagactggaattttctgtctttttatgtattcctcatgaattaa
cttgaatttccttatccttttccttccttgaaatatcagtagtgatataa
gagacctgagtcagtctcagacctcttagaaagccatgacattttacaga
gtggttgtgaccaccatcatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_105702643_105703737
seq2: B6Ng01-157B13.b_47_1107 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAC  50
                                      |||||||||| |||||||
seq2  --------------------------------ACACACACAC-CACACAC  17

seq1  CATATGCACACACTCCCATGACCAAAGGCGACTAGTTTCTTGAGGACTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCACACACTCCCATGACCAAAGGCGACTAGTTTCTTGAGGACTTT  67

seq1  GTTGCCAACTGCTCTCATGGGTTGTTTGGGCTTTGAAGGATTCCATTCTA  150
      ||||||||||||||||||| ||||||| ||| ||||||||||||||||||
seq2  GTTGCCAACTGCTCTCATGAGTTGTTT-GGCCTTGAAGGATTCCATTCTA  116

seq1  ACTCAGAGTAATTGCTACCAGAGGTGGACATGGGGATGTGAGGGGAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAGTAATTGCTACCAGAGGTGGACATGGGGATGTGAGGGGAAGGG  166

seq1  AAGAAAGGAACCAACTGACCCCATGGCATTGGAAGGATGGAAGAAGGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGGAACCAACTGACCCCATGGCATTGGAAGGATGGAAGAAGGTAG  216

seq1  GATGGAGTAACACTGTGGCCAAGAGAATAGCAAAGACTGGGGGACCCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGTAACACTGTGGCCAAGAGAATAGCAAAGACTGGGGGACCCAAC  266

seq1  AGAACAAGTGAGGTATCTATAATGCAAGGACAGAAGCTGGTCCAGGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAGTGAGGTATCTATAATGCAAGGACAGAAGCTGGTCCAGGAGGC  316

seq1  CCCATCAGACTAAGCGACATCCATGAGAGCAAAATAGGGACAGATATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAGACTAAGCGACATCCATGAGAGCAAAATAGGGACAGATATGGA  366

seq1  GTCAGATGGTGCACTGTATGTAATCCCAGCATGCAGGAGGTGAGGGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGGTGCACTGTATGTAATCCCAGCATGCAGGAGGTGAGGGTAAG  416

seq1  TGGACCAAAGCTTCGGGGTTTTTCTTGGCTAAATAACAAGTTCAAGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAAAGCTTCGGGGTTTTTCTTGGCTAAATAACAAGTTCAAGGTCA  466

seq1  TCCCAGAATAGAGAGGCAGCAAGAAGAAAGGAAGAGGAAGAAGAAACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAATAGAGAGGCAGCAAGAAGAAAGGAAGAGGAAGAAGAAACATG  516

seq1  ACCTGAAAAGAATCCCAAGAGAGGGAGACTGGCTACAGAGATACCAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAAAGAATCCCAAGAGAGGGAGACTGGCTACAGAGATACCAAAGC  566

seq1  GGCATGTGCAGACCCGGCCACCCAAGGCCCTGTTCAGAAGGTCCCCATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGCAGACCCGGCCACCCAAGGCCCTGTTCAGAAGGTCCCCATCA  616

seq1  GAGCTGGCAGTCCTGGGCAGGTATGACTATAACACAAAACGTGGCCCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGCAGTCCTGGGCAGGTATGACTATAACACAAAACGTGGCCCAGC  666

seq1  CCAGGTTCAGACACCAGTCCCTCCTCCCCTGGGGCCCCTGGCCTCTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCAGACACCAGTCCCTCCTCCCCTGGGGCCCCTGGCCTCTTCCT  716

seq1  TGGCATTGTGTAGCTTCCAGCTACCATACAACCTGGTTCTAGGAAACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTGTGTAGCTTCCAGCTACCATACAACCTGGTTCTAGGAAACCAG  766

seq1  GTTTCTGAGGGGACCTTTGAGGGAAACCTCACTGAACCATGAGCTAGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGAGGGGACCTTTGAGGGAAACCTCACTGAACCATGAGCTAGGAG  816

seq1  GACCAGCCTAGGTCCTGTCTGCCTCTGTTCTCCCTGTAGTCTTGTGCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCCTAGGTCCTGTCTGCCTCTGTTCTCCCTGTAGTCTTGTGCTCT  866

seq1  CTGCCTTCCCCAAGGCAGGTCCTACGTCTGCAACAGAGCTGGACTGGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTCCCCAAGGCAGGTCCTACGTCTGCAACAGAGCTGGACTGGAGA  916

seq1  ACACCAAGGCCTGCCCAGCCTGCCCAGATGTCCTGAGTCGGCGGCAGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAGGCCTGCCCAGCCTGCCCAGATGTCCTGAGTCGGCGGCAGAAG  966

seq1  CAGGCCTCACAGGAGATTGGCTGCCCATTATCCACTCGGGCCCTGTCTAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTCACAGGAGATTGGCTGCCCATTATCCACTCGGGCCCTGTCTAC  1016

seq1  TCAACCTCTGGGTTACATCCCTTGGCCTCACCAGTCAGAGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCTCTGGGTTACATCCCTTGGCCTCACCAGTCAGAGAATTC  1061