BAC Information

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BAC

Clone NameB6Ng01-157C14
Chromosome7 (Build37)
Map Location 125,460,127 - 125,518,714
singlet/doubletdoublet
Overlap genenone
Upstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339
Downstream geneSyt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b, Gpr139, LOC100042871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157C14.bB6Ng01-157C14.g
ACCDH951474DH951475
length1,1291,069
definitionDH951474|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C14, 5' end.DH951475|Mus musculus domesticus DNA, BAC clone: B6Ng01-157C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,517,576 - 125,518,714)(125,460,127 - 125,461,213)
sequence
gaattcctctcttcctcctctgctgccgctctgagttcagaccaactcca
gaacatcttgggattttgaccacaccccccagacttggcacaaactacgg
acctataccctgcctctactgaaggtataggtccatctagggcactaaga
ccaaccagccatttgaggcactggaactttgttcctatcaaacaaaaaaa
taactgcatggaagaagcattcctttcctgtcttaagtatccttgttgtc
cactgtggatgggagaactgcccttcattgtgtccagaattccagtagaa
ataactcagaggaattggtaggtaaaaactgtaacagtttgcccctagaa
gaaaatgctgggaggcctttaagtttcaaggtggctaacctttggagagg
gtattagctttccatcactgtaacaaaatacctgagggacaaagtatgaa
agatcaaagcaggccaaggttttgatgtctgctgagggcagtagatggag
tcacatcttggttagggcattgaaaccaggaagtagagtcggagagaggg
tgctggcttgctgatctcataaccctcgagggggtcacacatgaatgacc
ttaacttcttccaaggaaaatgtccccagtgatttcccatcaggaagctc
ttgaaagctcaaccacttcccaatactgccagattcatcacaaggaccat
tgggggacatttcatgtcatatctagatgacactagttcctttcgttcca
gactttaggtcatcttatccaggaatatttaaggttctgggttatgggtg
cttcttactagccaagtattttctaagtacttgtactggagaggcaccat
tttgttcatattgtgtaggcaggaaagctgaggtttgagacactttccag
ttggtgtcacagcagaatatgaaggtttatgcctcatagtttatgaagtg
aataagtatcgactcctcttttatatggtcgtgacagaggatttactaaa
taggcatatttttaaatgtttgatgcatatacatgtgtgtatgcagtgtt
gtatgacaagcagagatcagaggagacaccaagtgtcccttcatcactct
ttccattaggcctttgagtagggactctc
gaattcactatagagaccaggccacacaattaaaaaaaacaaaaaacaaa
aaacaaacaaacgtcaaggggcgaggctgtagcccagaagcatctgcttg
cccagtgtgcacaaggttctgggtctgatctccagcaccacaaagcagtt
cagcaagcagaagaatggtggtcagcagggagtggaggagtcctgagcag
gggtctgcggggactgaaaagtgatggagactcactctggatgtgtttaa
cattctcagctgcacacttgaaatggtcacaacagtaagaacacttagtg
tagttattagcattaaaaacatgattatctagccaaaatgtcagatgcta
aatgtacctaccatttgtctgtgttaacagatcagtcagtgaccagtcaa
ggcaggtgggaagtgctcgggaccttccaagtgcaggaagaggtgagtca
gagtaagcaagccaggactggccaatgtgaaatacttaactgtactctgg
tatgtagggattgtccatcattgtctggcacctgttaggttttcagccgt
agtctaatcaggccatgcccaccggtagatttcttacttttttttttaaa
gcaatgcaattataacacagatatctattacatgatccttagcttgctgc
taggatttctagcttcatcagatgacctttccccctgaccctggagtcct
tttttttttttttaaagatttatttatttattatatgtaagtacactgta
gctgtcttcagacactccagaagagggcctcagatttcgttacggatggt
tgtgagccaccatgtggttgctgggattagaactcgggaccttcggaaga
gcagtcggtgctcttaaccactgagccatctcgccagccccccaccagta
gatttctaagcctctaacagactcataggagcccttgttatagagcaaat
ggtagtgtcatttgtacgttccgaaggaagtcatagactttaatatttcg
ctctgggtctaagggctactgtgtgcattatgcaaaactatgatctcagt
gtgccaagagaacatacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125517576_125518714
seq2: B6Ng01-157C14.b_49_1177 (reverse)

seq1  GAGAGTCCCTACCTCAAAGGGCT-ATGTGAAGAGTGATGAAGGGGACACT  49
      ||||||||||| |||||||| || |||  |||||||||||| ||||||||
seq2  GAGAGTCCCTA-CTCAAAGGCCTAATGGAAAGAGTGATGAA-GGGACACT  48

seq1  TGGTGTCCTCCTCTGATCTCTGCTTGTTCATACACACACCTGCATACACA  99
      |||||| ||||||||||||||||||| ||||||| ||| |||||||||||
seq2  TGGTGT-CTCCTCTGATCTCTGCTTG-TCATACA-ACA-CTGCATACACA  94

seq1  CATGTATATGCATTCAAACATTTAAAAATATTGCCTATTTAGTAAATCCT  149
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  CATGTATATGCA-TCAAACATTTAAAAATA-TGCCTATTTAGTAAATCCT  142

seq1  CTGTTCACGACCATTATAAAAGAGGAGTCGATACTTATTCACTTCATAAA  199
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTG-TCACGACCA-TATAAAAGAGGAGTCGATACTTATTCACTTCATAAA  190

seq1  CTATGAGGCATAAACCTTCATATTCTGCTGTGACACCAACTGGGAAGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTATGAGGCATAAACCTTCATATTCTGCTGTGACACCAACTGGAAAGTGT  240

seq1  CTTCAAGCCTCAGCTTTCCTGCCTACACAATATGAACAAAATGGTGCCTC  299
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  C-TCAAACCTCAGCTTTCCTGCCTACACAATATGAACAAAATGGTGCCTC  289

seq1  TCCAGTACAAGTACTTAGAAAATACTTGGCTAGTAAGAAGCACCCATAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTACAAGTACTTAGAAAATACTTGGCTAGTAAGAAGCACCCATAAC  339

seq1  CCAGAACCTTAAATATTCCTGGATAAGATGACCTAAAGTCTGGAACGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCTTAAATATTCCTGGATAAGATGACCTAAAGTCTGGAACGAAA  389

seq1  GGAACTAGTGTCATCTAGATATGACATGAAATGTCCCCCAATGGTCCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAGTGTCATCTAGATATGACATGAAATGTCCCCCAATGGTCCTTG  439

seq1  TGATGAATCTGGCAGTATTGGGAAGTGGTTGAGCTTTCAAGAGCTTCCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATCTGGCAGTATTGGGAAGTGGTTGAGCTTTCAAGAGCTTCCTG  489

seq1  ATGGGAAATCACTGGGGACATTTTCCTTGGAAGAAGTTAAGGTCATTCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAATCACTGGGGACATTTTCCTTGGAAGAAGTTAAGGTCATTCAT  539

seq1  GTGTGACCCCCTCGAGGGTTATGAGATCAGCAAGCCAGCACCCTCTCTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGACCCCCTCGAGGGTTATGAGATCAGCAAGCCAGCACCCTCTCTCC  589

seq1  GACTCTACTTCCTGGTTTCAATGCCCTAACCAAGATGTGACTCCATCTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTACTTCCTGGTTTCAATGCCCTAACCAAGATGTGACTCCATCTAC  639

seq1  TGCCCTCAGCAGACATCAAAACCTTGGCCTGCTTTGATCTTTCATACTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCAGCAGACATCAAAACCTTGGCCTGCTTTGATCTTTCATACTTT  689

seq1  GTCCCTCAGGTATTTTGTTACAGTGATGGAAAGCTAATACCCTCTCCAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCAGGTATTTTGTTACAGTGATGGAAAGCTAATACCCTCTCCAAA  739

seq1  GGTTAGCCACCTTGAAACTTAAAGGCCTCCCAGCATTTTCTTCTAGGGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGCCACCTTGAAACTTAAAGGCCTCCCAGCATTTTCTTCTAGGGGC  789

seq1  AAACTGTTACAGTTTTTACCTACCAATTCCTCTGAGTTATTTCTACTGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTACAGTTTTTACCTACCAATTCCTCTGAGTTATTTCTACTGGA  839

seq1  ATTCTGGACACAATGAAGGGCAGTTCTCCCATCCACAGTGGACAACAAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGACACAATGAAGGGCAGTTCTCCCATCCACAGTGGACAACAAGG  889

seq1  ATACTTAAGACAGGAAAGGAATGCTTCTTCCATGCAGTTATTTTTTTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAAGACAGGAAAGGAATGCTTCTTCCATGCAGTTATTTTTTTGTT  939

seq1  TGATAGGAACAAAGTTCCAGTGCCTCAAATGGCTGGTTGGTCTTAGTGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGAACAAAGTTCCAGTGCCTCAAATGGCTGGTTGGTCTTAGTGCC  989

seq1  CTAGATGGACCTATACCTTCAGTAGAGGCAGGGTATAGGTCCGTAGTTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGGACCTATACCTTCAGTAGAGGCAGGGTATAGGTCCGTAGTTTG  1039

seq1  TGCCAAGTCTGGGGGGTGTGGTCAAAATCCCAAGATGTTCTGGAGTTGGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGTCTGGGGGGTGTGGTCAAAATCCCAAGATGTTCTGGAGTTGGT  1089

seq1  CTGAACTCAGAGCGGCAGCAGAGGAGGAAGAGAGGAATTC  1139
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTCAGAGCGGCAGCAGAGGAGGAAGAGAGGAATTC  1129

seq1: chr7_125460127_125461213
seq2: B6Ng01-157C14.g_68_1136

seq1  GAATTCACTATAGAGACCAGGCCACACAATTAAAAAAAACAAAAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATAGAGACCAGGCCACACAATTAAAAAAAACAAAAAACAAA  50

seq1  AAACAAACAAACGTCAAGGGGCGAGGCTGTAGCCCAGAAGCATCTGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACGTCAAGGGGCGAGGCTGTAGCCCAGAAGCATCTGCTTG  100

seq1  CCCAGTGTGCACAAGGTTCTGGGTCTGATCTCCAGCACCACAAAGCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTGCACAAGGTTCTGGGTCTGATCTCCAGCACCACAAAGCAGTT  150

seq1  CAGCAAGCAGAAGAATGGTGGTCAGCAGGGAGTGGAGGAGTCCTGAGCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGCAGAAGAATGGTGGTCAGCAGGGAGTGGAGGAGTCCTGAGCAG  200

seq1  GGGTCTGCGGGGACTGAAAAGTGATGGAGACTCACTCTGGATGTGTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGCGGGGACTGAAAAGTGATGGAGACTCACTCTGGATGTGTTTAA  250

seq1  CATTCTCAGCTGCACACTTGAAATGGTCACAACAGTAAGAACACTTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCAGCTGCACACTTGAAATGGTCACAACAGTAAGAACACTTAGTG  300

seq1  TAGTTATTAGCATTAAAAACATGATTATCTAGCCAAAATGTCAGATGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATTAGCATTAAAAACATGATTATCTAGCCAAAATGTCAGATGCTA  350

seq1  AATGTACCTACCATTTGTCTGTGTTAACAGATCAGTCAGTGACCAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCTACCATTTGTCTGTGTTAACAGATCAGTCAGTGACCAGTCAA  400

seq1  GGCAGGTGGGAAGTGCTCGGGACCTTCCAAGTGCAGGAAGAGGTGAGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTGGGAAGTGCTCGGGACCTTCCAAGTGCAGGAAGAGGTGAGTCA  450

seq1  GAGTAAGCAAGCCAGGACTGGCCAATGTGAAATACTTAACTGTACTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGCAAGCCAGGACTGGCCAATGTGAAATACTTAACTGTACTCTGG  500

seq1  TATGTAGGGATTGTCCATCATTGTCTGGCACCTGTTAGGTTTTCAGCCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGGATTGTCCATCATTGTCTGGCACCTGTTAGGTTTTCAGCCGT  550

seq1  AGTCTAATCAGGCCATGCCCACCGGTAGATTTCTTACTTTTTTTTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAATCAGGCCATGCCCACCGGTAGATTTCTTACTTTTTTTTTTAAA  600

seq1  GCAATGCAATTATAACACAGATATCTATTACATGATCCTTAGCTTGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCAATTATAACACAGATATCTATTACATGATCCTTAGCTTGCTGC  650

seq1  TAGGATTTCTAGCTTCATCAGATGACCTTTCCCCCTGACCCTGGAGTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTTCTAGCTTCATCAGATGACCTTTCCCCCTGACCCTGGAGTCCT  700

seq1  TTTTTTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTA  750

seq1  GCTGTCTTCAGACACTCCAGAAGAGGGCCTCAGATTTCGTTACGGATGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTCAGACACTCCAGAAGAGGGCCTCAGATTTCGTTACGGATGGT  800

seq1  TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCGGGACCTTCGGAAGA  850
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGTGAGCCACCATGTGGTTGCTGGGATTAGAACTCGGGACCTTCGGAAGA  850

seq1  GCAGTCGGTGCTCTTAACCACTGAGCCATCTCGCCAGCCCCCCACCAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCGGTGCTCTTAACCACTGAGCCATCTCGCCAGCCCCCCACCAGTA  900

seq1  GATTTCTAAGCCTCTAACAGACTCATAGGAGCCC-TGGTATAGAGGCAAA  949
      |||||||||||||||||||||||||||||||||| || |||||| |||||
seq2  GATTTCTAAGCCTCTAACAGACTCATAGGAGCCCTTGTTATAGA-GCAAA  949

seq1  TGGTAGGTGTCATTTGTACGTTCCGAAGGAAGTTCATAGACTTT-ATATT  998
      ||||| |||||||||||||||||||||||||| ||||||||||| |||||
seq2  TGGTA-GTGTCATTTGTACGTTCCGAAGGAAG-TCATAGACTTTAATATT  997

seq1  TCCGGGCTCTGGGTCCTTAAAGGGCTACTGGTGGTGGCATTATGGCAAAA  1048
      ||   ||||||||||    |||||||||| |||   ||||||||   |||
seq2  TC---GCTCTGGGTC---TAAGGGCTACT-GTG--TGCATTATG--CAAA  1036

seq1  ACTATGATCTCAGTGTTGCACAAAGGAAGGAACATACAA  1087
      ||||||||||||||| ||| |||  ||  ||||||||||
seq2  ACTATGATCTCAGTG-TGC-CAA--GA--GAACATACAA  1069