BAC Information

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BAC

Clone NameB6Ng01-157I13
Chromosome7 (Build37)
Map Location 26,460,899 - 26,462,035
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik
Downstream geneBC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12, EG243881
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157I13.bB6Ng01-157I13.g
ACCDH951742DH951743
length1,2861,114
definitionDH951742|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I13, 5' end.DH951743|Mus musculus domesticus DNA, BAC clone: B6Ng01-157I13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttatgcagatggaagattatatcttataatagatatttttagca
cacagagtaaaatattaaaagtctatataagtaagacttctgaataaatt
ctaaaaggaagaaatgagatatcagttagctggaatggatccagctgaga
ttgtagtaccttttactaatgctgaaattgtctcattgtgggcagaaaat
gaacattggcaaagagcttacagtaattcttttggagaaactaacaaata
tacaaaaaagcaagtgacctcagtttataagaagaaataatcatattctc
cctcatataataaaagggacaccaatttctggagtaccttcattttatac
tcgtgcaaataaatcgggaaaggcaggatatacgccaacaagtataagag
attgcgagtccctagaattcagttcaaaaatcaaagctgtgtgccattat
tgtggtattatgagactcttgatatgcagaaagagttgttttgcatatag
aaactgctaaacttattcaagatgattccaaattaaaatcaatgtttatt
caactacaacaaatgatcaaaccagaaatcatctcttgtatataacagat
atcaaataccatgtggatctaccaggtcttctagaacaagataatgatga
aattgatcagctattgataggaagtatactagaggcttcaaatttttatt
taaaaacaccatgttaacagcaaaggtttataaaaattttttttctatca
catggcaagaagccaagaaaattgaaaagaaatgtcctacttgtccttta
tataaccaaactctattacctgcaggaaatatctctataagtgccccaaa
aatgacatttggcaaatggatgtgtttcattgtgcagagtttggtaaact
gaaatgtgtgcatcatactataaacacatatttaggatttcagtgagcaa
ctgctttaagttctgcaaaggccaattctttcattacaaatttattagaa
gttatggcaattgtggggactacctagacaatagactgacaaccctcctt
ccagcatatgtcaatagtaaataagacattttgcaaatatataaaaaacg
tttacagctttacatccagggctaaggaatgacggttatggagagattca
attatctttaaaagtgcttagaaacagaagggcatcagttctggaataga
ttacgtaggctctgacctaatttgagtgggcatcattaacaccgctcgtg
agactgtggattaacagagcacgcgctgctgatcta
gaattcactaggagggtaaggatgatgggtgttactgagctcagtggtct
gatggaaaaatgaggctagttaggagttcataccctcatccgtgagtccg
aaaggagggccttctttgtgccatgcacttttttttcaggcccgaggcac
atccctgaacaaaagagactaaatcccagccccagtggagctggtgttga
tgggagcaggcaggagcggcatgcaaacggaagcgggtagcagtttttta
acgtggcgtaaaagacaaatagagcaagaggaaggagctagtaaatacct
tctggtgaaaaccatcctggcccttgcccctggcgttatccctcccgtgg
gtctctgtgccagacactcagactgagccaagcatgctcccagacgccat
ctgctctctccgggagtggggccggtgccagcttgagtgtttggactctt
ggcaaagttccctggcaccctagagctagggaactccacggcctcacatc
gggaatcctcctgtctagccagatggagggcggcaggaaagggaggcagt
gcaaactgggtgggcttcctgaaggaggggatgtcttggagggccaggag
cgttcttcagttgaacggacacgtattataaatcataaaattgataaaca
cattacatgtgttcactgcgcttactttgccagactttgggtaaatgtgt
gggcatttgttgtcacatctaagttaaaatccatatgtcgggctgtggaa
atgactcagaggaaaggggggcttgctgctaatcctgataatctatgttg
gatcccaggaacatatctggtggaagaaaagaaccaactcctacaattca
tccactgacttctacacatgcttgctctacatagcatgtgtgcaccacac
aaagaataatgtatataaaattttttgttttgttttggagacagggtttc
tctgtgtagccctggctgtctggaactcactttgtagacaggctgactca
actcagaaatcggcttgcctctgctccgagtgctgggataaaggcgtgtg
ccacccaactcggcataaaaatgtttaatgtatacattagaagaatggcc
atgtcccgagtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_26460899_26462035
seq2: B6Ng01-157I13.g_68_1181 (reverse)

seq1  GAAACTCGGGACATATGCCCATCCTCCTAGATGTGATAACAATTAAACAT  50
      ||||||||||||  ||| |||| || ||| |||| |||   |||||||| 
seq2  GAAACTCGGGAC--ATGGCCATTCTTCTA-ATGT-ATA--CATTAAACA-  43

seq1  TTTTTTATGCCGAGTGTGGTGGCACACGCCTTTAATCCCAGCACTCGGGA  100
       ||||||||||||||  |||||||||||||||| ||||||||||||||  
seq2  -TTTTTATGCCGAGTTGGGTGGCACACGCCTTT-ATCCCAGCACTCGG--  89

seq1  GGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGT  150
       ||||||||| || |||||||||| |||| | |||||| |||||||||||
seq2  AGCAGAGGCAAGCCGATTTCTGAG-TTGA-GTCAGCCT-GTCTACAAAGT  136

seq1  GAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCCAAAAACA  200
      |||||||| ||||||||||||||||||||||||||||||||||||||   
seq2  GAGTTCCA-GACAGCCAGGGCTACACAGAGAAACCCTGTCTCCAAAA--C  183

seq1  AAAACAAAAAAATTTTTATATTACATTTATTTCTTTTGTGTGGTGCACAC  250
      |||||||||||  ||||||| |||| |||||   ||||||||||||||||
seq2  AAAACAAAAAA--TTTTATA-TACA-TTATT--CTTTGTGTGGTGCACAC  227

seq1  ATGCTATGTAGAGCAAGCATGTGTAGAAGTCAGTGGATGAATTGTAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGTAGAGCAAGCATGTGTAGAAGTCAGTGGATGAATTGTAGGAG  277

seq1  TTGGTTCTTTTCTTCCACCAGATATGTTCCTGGGATCCAACATAGATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCTTTTCTTCCACCAGATATGTTCCTGGGATCCAACATAGATTAT  327

seq1  CAGGATTAGCAGCAAGCCCCCCTTTCCTCTGAGTCATTTCCACAGCCCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTAGCAGCAAGCCCCCCTTTCCTCTGAGTCATTTCCACAGCCCGA  377

seq1  CATATGGATTTTAACTTAGATGTGACAACAAATGCCCACACATTTACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGATTTTAACTTAGATGTGACAACAAATGCCCACACATTTACCCA  427

seq1  AAGTCTGGCAAAGTAAGCGCAGTGAACACATGTAATGTGTTTATCAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGCAAAGTAAGCGCAGTGAACACATGTAATGTGTTTATCAATTT  477

seq1  TATGATTTATAATACGTGTCCGTTCAACTGAAGAACGCTCCTGGCCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTATAATACGTGTCCGTTCAACTGAAGAACGCTCCTGGCCCTCC  527

seq1  AAGACATCCCCTCCTTCAGGAAGCCCACCCAGTTTGCACTGCCTCCCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATCCCCTCCTTCAGGAAGCCCACCCAGTTTGCACTGCCTCCCTTT  577

seq1  CCTGCCGCCCTCCATCTGGCTAGACAGGAGGATTCCCGATGTGAGGCCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGCCCTCCATCTGGCTAGACAGGAGGATTCCCGATGTGAGGCCGT  627

seq1  GGAGTTCCCTAGCTCTAGGGTGCCAGGGAACTTTGCCAAGAGTCCAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCCCTAGCTCTAGGGTGCCAGGGAACTTTGCCAAGAGTCCAAACA  677

seq1  CTCAAGCTGGCACCGGCCCCACTCCCGGAGAGAGCAGATGGCGTCTGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTGGCACCGGCCCCACTCCCGGAGAGAGCAGATGGCGTCTGGGA  727

seq1  GCATGCTTGGCTCAGTCTGAGTGTCTGGCACAGAGACCCACGGGAGGGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTTGGCTCAGTCTGAGTGTCTGGCACAGAGACCCACGGGAGGGAT  777

seq1  AACGCCAGGGGCAAGGGCCAGGATGGTTTTCACCAGAAGGTATTTACTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCCAGGGGCAAGGGCCAGGATGGTTTTCACCAGAAGGTATTTACTAG  827

seq1  CTCCTTCCTCTTGCTCTATTTGTCTTTTACGCCACGTTAAAAAACTGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCTCTTGCTCTATTTGTCTTTTACGCCACGTTAAAAAACTGCTA  877

seq1  CCCGCTTCCGTTTGCATGCCGCTCCTGCCTGCTCCCATCAACACCAGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTTCCGTTTGCATGCCGCTCCTGCCTGCTCCCATCAACACCAGCTC  927

seq1  CACTGGGGCTGGGATTTAGTCTCTTTTGTTCAGGGATGTGCCTCGGGCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGCTGGGATTTAGTCTCTTTTGTTCAGGGATGTGCCTCGGGCCT  977

seq1  GAAAAAAAAGTGCATGGCACAAAGAAGGCCCTCCTTTCGGACTCACGGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGTGCATGGCACAAAGAAGGCCCTCCTTTCGGACTCACGGAT  1027

seq1  GAGGGTATGAACTCCTAACTAGCCTCATTTTTCCATCAGACCACTGAGCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTATGAACTCCTAACTAGCCTCATTTTTCCATCAGACCACTGAGCT  1077

seq1  CAGTAACACCCATCATCCTTACCCTCCTAGTGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  CAGTAACACCCATCATCCTTACCCTCCTAGTGAATTC  1114