BAC Information

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BAC

Clone NameB6Ng01-157K08
Chromosome7 (Build37)
Map Location 98,842,924 - 98,844,135
singlet/doubletsinglet
Overlap geneDlg2
Upstream geneLOC666689, LOC621816, LOC100039943
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157K08.bB6Ng01-157K08.g
ACCDH951822DH951823
length1,189556
definitionDH951822|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K08, 5' end.DH951823|Mus musculus domesticus DNA, BAC clone: B6Ng01-157K08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttttccctcttacaaaagtataataaatatttccaaggcattt
ttatatatttttatttgaaccctataaattacctatgataatgggttgtc
tctattatacacgaaaggaaataaaggctcggaaaagtcaagaggctata
tctgactatatacatgttaccaagagcaaacaaggaccttacaattccta
tcatttcttataatgcttaggcctgtatcattgcttttagcatgctgttg
accagttaccagacaaggagtagattcatgaatgagatgtttattttggt
ttgaggtttatgaccatcattcagtgtgtttcagagggcatgttagcagg
acagactcataactctggtggatgaggccttgctcacatctgggccaaat
gggaagcagagaaaagaaagtggaagccctcagctggctctctcctcttt
cctctggttaagtccagtacctctgcatatagaaggtgctgaccacattc
caggatgccattcttccttccattagtcctctttggaaatgtcctcataa
acacacaccaaagtgttttcctgggcatttcttaactcaatcaaactgac
aatcatggattcacttagaatacaaaaaggcatagagaatggccattata
tctaagtaacctctatacaacaaaataattaccatatatttgatcaatct
catatactccctttcctgacaaatctgtagaaaaagctctttctggcatt
atgatgatattcccttagggggctcatcccctttgctcagtgaaagccat
gatctgggctgatatctagtcctagttgattgttttgaagctgtggctac
tcaagcctgactgagaattattttgtaatagataagaagccacactgagt
atcattaccgtgagtagacagtattgggaacaatcttgctagttgtccct
gttaatgaaaccagaaattctctataaagccacactacagtgtatgaata
tggtgccattccctgagacttggccattcagcaatcatatagcatctgct
ttaatcaactcttaatccttccaaattctaatatgcaaatagaagtaaag
aggatcggtcatgaggacccatcatcctggcaggtagcctatggagttat
cctttgttttagaaatatattttaattaggagttctcat

ctgttaactatggtttcagaatgcttcaattgaacagaatctggaagaaa
ggacttgaaaacaagaagagactgagggaaaggaggtccagcaacgggtc
caacttgggatgcatctcaagtggaggcgccaaggcctaaaactattatt
gatgctatgctatgcttacagacaggagcctagcatgcctgccttctgaa
agcccaacaagcagctgaccaagatggacacagatacttatacccaacca
atggactgaagtctgtggttgaaatagggaaagactggaagaagttgaag
aggagggtgatcccataggaagatccacagtctcaaccaacctggatccc
agagatctctctgatactgagccaccaaccaggaaggtctgaggcctggg
aaacatatgcagcagaggcctgcctggtctggcctcagtgagaagagaca
cctaaccctcaagggacttgaggccccagggagttgggaggcctggcagg
gtggggggagtggggacatcctcttggagatgggagaggaggaatgggat
gaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_98842924_98844135
seq2: B6Ng01-157K08.b_47_1235

seq1  GAATTCCTTTTCCCTCTTACAAAAGTATAATAAATATTTCCAAGGCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTCCCTCTTACAAAAGTATAATAAATATTTCCAAGGCATTT  50

seq1  TTATATATTTTTATTTGAACCCTATAAATTACCTATGATAATGGGTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTTTTATTTGAACCCTATAAATTACCTATGATAATGGGTTGTC  100

seq1  TCTATTATACACGAAAGGAAATAAAGGCTCGGAAAAGTCAAGAGGCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTATACACGAAAGGAAATAAAGGCTCGGAAAAGTCAAGAGGCTATA  150

seq1  TCTGACTATATACATGTTACCAAGAGCAAACAAGGACCTTACAATTCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTATATACATGTTACCAAGAGCAAACAAGGACCTTACAATTCCTA  200

seq1  TCATTTCTTATAATGCTTAGGCCTGTATCATTGCTTTTAGCATGCTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTATAATGCTTAGGCCTGTATCATTGCTTTTAGCATGCTGTTG  250

seq1  ACCAGTTACCAGACAAGGAGTAGATTCATGAATGAGATGTTTATTTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTACCAGACAAGGAGTAGATTCATGAATGAGATGTTTATTTTGGT  300

seq1  TTGAGGTTTATGACCATCATTCAGTGTGTTTCAGAGGGCATGTTAGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTTATGACCATCATTCAGTGTGTTTCAGAGGGCATGTTAGCAGG  350

seq1  ACAGACTCATAACTCTGGTGGATGAGGCCTTGCTCACATCTGGGCCAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTCATAACTCTGGTGGATGAGGCCTTGCTCACATCTGGGCCAAAT  400

seq1  GGGAAGCAGAGAAAAGAAAGTGGAAGCCCTCAGCTGGCTCTCTCCTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAGAGAAAAGAAAGTGGAAGCCCTCAGCTGGCTCTCTCCTCTTT  450

seq1  CCTCTGGTTAAGTCCAGTACCTCTGCATATAGAAGGTGCTGACCACATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTTAAGTCCAGTACCTCTGCATATAGAAGGTGCTGACCACATTC  500

seq1  CAGGATGCCATTCTTCCTTCCATTAGTCCTCTTTGGAAATGTCCTCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCCATTCTTCCTTCCATTAGTCCTCTTTGGAAATGTCCTCATAA  550

seq1  ACACACACCAAAGTGTTTTCCTGGGCATTTCTTAACTCAATCAAACTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCAAAGTGTTTTCCTGGGCATTTCTTAACTCAATCAAACTGAC  600

seq1  AATCATGGATTCACTTAGAATACAAAAAGGCATAGAGAATGGCCATTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGGATTCACTTAGAATACAAAAAGGCATAGAGAATGGCCATTATA  650

seq1  TCTAAGTAACCTCTATACAACAAAATAATTACCATATATTTGATCAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTAACCTCTATACAACAAAATAATTACCATATATTTGATCAATCT  700

seq1  CATATACTCCCTTTCCTGACAAATCTGTAGAAAAAGCTCTTTCTGGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTCCCTTTCCTGACAAATCTGTAGAAAAAGCTCTTTCTGGCATT  750

seq1  ATGATGATATTCCCTTAGGGGGCTCATCCCCTTTGCTCAGTGAAAGCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGATATTCCCTTAGGGGGCTCATCCCCTTTGCTCAGTGAAAGCCAT  800

seq1  GATCTGGGCTGATATCTAGTCCTAGTTGATTGTTTTGAAGCTGTGGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGCTGATATCTAGTCCTAGTTGATTGTTTTGAAGCTGTGGCTAC  850

seq1  TCAAGCCTGACTGAGAATTATTTTGTAATAGATAAGAAGCCACACTGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCCTGACTGAGAATTATTTTGTAATAGATAAGAAGCCACACTGAGT  900

seq1  ATCATTACCGTGAGTAGACAGTTATTGGGAACAATCTTGCTAGTTGTCCC  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATCATTACCGTGAGTAGACAG-TATTGGGAACAATCTTGCTAGTTGTCCC  949

seq1  TGTTAATGAAAACCAGAAATTCTCTTATAAAGCCACACTACAGTGTTATG  1000
      |||||||| ||||||||||||||| |||||||||||||||||||| ||||
seq2  TGTTAATG-AAACCAGAAATTCTC-TATAAAGCCACACTACAGTG-TATG  996

seq1  AATATGGTTGCCATTCCCTGAGACTTGGCCATTCAGCAAATCATATAGCC  1050
      ||||||| ||||||||||||||||||||||||||||| ||||||||||| 
seq2  AATATGG-TGCCATTCCCTGAGACTTGGCCATTCAGC-AATCATATAGC-  1043

seq1  TTTCTGTCTTTAATCAACTCTTAATCTCTCCAAATATCTAATATGCAAAT  1100
        |||| |||||||||||||||||||  ||||||| ||||||||||||| 
seq2  -ATCTG-CTTTAATCAACTCTTAATCCTTCCAAAT-TCTAATATGCAAA-  1089

seq1  TAGAAGTAAAAGAGATCGGTCAGTGAAGACCCATTCATCCT-GCAGTGTA  1149
      ||||||||||   ||||||||| ||| |||||| ||||||| |||| || 
seq2  TAGAAGTAAAGAGGATCGGTCA-TGAGGACCCA-TCATCCTGGCAG-GT-  1135

seq1  AGCTTAGGGAGTTAATTCTTTTTGTTTTTAAGATTTATTTTTTTAATTAG  1199
      ||| || |||||||  ||  ||||||||  | || ||   ||||||||||
seq2  AGCCTATGGAGTTA--TC-CTTTGTTTTAGAAATATA---TTTTAATTAG  1179

seq1  GTAGTTTCCTCAT  1212
      | ||||  |||||
seq2  G-AGTT--CTCAT  1189


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