BAC Information

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BAC

Clone NameB6Ng01-158B03
Chromosome7 (Build37)
Map Location 62,582,132 - 62,729,321
singlet/doubletdoublet
Overlap geneLOC668796
Upstream geneMrps33p, LOC622146, Luzp2
Downstream geneSiglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158B03.bB6Ng01-158B03.g
ACCDH952129DH952130
length1,1291,219
definitionDH952129|Mus musculus domesticus DNA, BAC clone: B6Ng01-158B03, 5' end.DH952130|Mus musculus domesticus DNA, BAC clone: B6Ng01-158B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,728,176 - 62,729,321)(62,582,132 - 62,583,379)
sequence
gaattcatagtgcagcatgtgcagtttggcatttagtattatgaagacat
aaaagcaggaatgagacaggctggaaatttggtcgaacacttttaaaaat
actcactctcaaggtagctagccctttcttatgataacatgattcattta
ttcagaagaggtactcatgaattattcacccctttagggtcctaccacaa
aatggtgctatactagaaggcaaatttcagcacaagtgctggaaggatca
caaagcatagaaagggatattaaacatattgaaaagtagagttgtagttt
gaatcaaaaataacattgggaaattataagaagaccagattgattgcatg
gggctaaatttctgctgaaatgaattctagccagaagtttggataccact
gaattgcaataatatttatttgtttgtgtaaacatccttttacaggtatg
attcaattaaaaatgtaatatctactcataatttattcaattagtacaat
attttaataaaatttctatgatatatttttaaattatatttaatgttttt
tacagtccactcattatccctctcctggtctgctctctgaaagttcttca
tcccattccttctgttctcaccatctacaagaggatgtccccatatgtag
atgttggagattttaggtaaagaatatgtttacagggtttggaaagatgg
atcaacatttaggaacatttgcaggtcttagagaggacctgaatgcagtt
ctaagaatccacatcaagtggctcaccaacccttgtaactccacttcaaa
gggatccaatccagtaccctttcactgactgtctaaacagctgtacacat
gtgtgcattattcttcacaaacacacatatgtatttacagtttcttaaac
tatgtttcttacaattatattttattatcatacacatatacatatgatat
gtaatatgggtgcagacaatatagacttatttttcattgtatgaaaggca
agcctctttctatttaatgtaaacagacaaaaacatgaaataatacaatt
catatttcttataattatttgtacaacaaattcagtatgaccatacttaa
atatgagcatacttattttttcatcattg
gaattcttgtttcccagcatgaagaactagaactatattctagaaagagc
ctttcctattacttgaagtcctgtaatatacaaaagaaggctcattcatt
attctttctcttcaatgtcagattgaaaaaaaaacctttaatttatttac
ttttacttagtgcggatcctttataaagtaaagtaaggaactgaaatcaa
tcatgcagagaagaactgagcatcagtttcttgtgtgacccacaaaattt
aatgatcacaaaactaattaacatccaaaatcttccaggtttaaaagaaa
atgtttctcaggctgtcttcctcaagatatttgcaaaactcagctactct
ccacagagaagtgtgcagagtcttaattagtctttgctacagctggacaa
tcaatccaaagaaatcatgtaaaacacttgagagttaaaactgaatattc
cagctgtccagtgctctctctaaattccatagagcagttcattctctctg
taacgcaagcatctaagtaagcggtttctattcccacaacattaaagatg
gtagtgcgagtgggtctaggtaatgtgctatgaagtaacttctacattga
aggaaaggtttatattctactgtcataaccttcaatataggagattgaaa
gtagtaggatatgtgttaccacaggctactaacatagagttcctcctctt
tagatgaagcaagtttctttccttggcttgctgctcagtcattctattca
ccactggactgtgaaagaggtaatctctcccctacagcaccttactgcag
tgttgctcagaagtgcctgataaaggcaagttacaaggaatattgacaac
aactattctaaccaacaacaatgacaaaattcatctaatttgctatgagc
tgctgccctaaaagtgggaaataggccagaggtccagatatcaggagcta
gtttagtagcaatgatcattatctcttacactatccaggatcctatctca
tcctgacactgacattcttgcgatgtgacagcactatctgtcatctcagc
tctatcgggtcaggataaccagagggcttgtaacctggtagcctaaatca
ttttcctaaaattcttttatgtgttcaccaatagacacgattcctctcca
ggccaaactagtccgttactgatgcattcgatgccaatccatcgagcaat
ggcatttctccttctccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62728176_62729321
seq2: B6Ng01-158B03.b_47_1175 (reverse)

seq1  CAATGATGAAAAAATAAGTAATGCTCATATTTAAGGTATTGGGTCATTAC  50
      ||||||||||||||||||| |||||||||||||| ||||  ||||| |||
seq2  CAATGATGAAAAAATAAGT-ATGCTCATATTTAA-GTAT--GGTCA-TAC  45

seq1  TGAATTTTGTTGGTTACAAATAATTAATAAGAAAATATGAATTTTGTATT  100
      |||| |||||||  ||||||||||| ||||| |||||||||  |||||||
seq2  TGAA-TTTGTTG--TACAAATAATT-ATAAG-AAATATGAA--TTGTATT  88

seq1  ATTTCAATGTTTTTGTCTGTTTTACATTAAAATAAGAAAGAGGCTTGCCT  150
      ||||| ||||||||||||| |||||||||||   ||||||||||||||| 
seq2  ATTTC-ATGTTTTTGTCTG-TTTACATTAAA--TAGAAAGAGGCTTGCC-  133

seq1  TTTCATACAATTGAAAATAAGTCTATATTGTCTGCACCCATA-TACATAT  199
      |||||||||||  ||||||||||||||||||||||||||||| |||||||
seq2  TTTCATACAATGAAAAATAAGTCTATATTGTCTGCACCCATATTACATAT  183

seq1  CATATGTATATGTGTATGATAATAAAATATAATTGTAAGAAACATAGTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CATATGTATATGTGTATGATAATAAAATATAATTGTAAGAAACATAG-TT  232

seq1  TAAGAAACTGTAAATACATATGTGTGTTTGTGAAGAATAATGCACACATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACTGTAAATACATATGTGTGTTTGTGAAGAATAATGCACACATG  282

seq1  TGTACAGCTGTTTAGACAGTCAGTGAAAGGGTACTGGATTGGATCCCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGCTGTTTAGACAGTCAGTGAAAGGGTACTGGATTGGATCCCTTT  332

seq1  GAAGTGGAGTTACAAGGGTTGGTGAGCCACTTGATGTGGATTCTTAGAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGAGTTACAAGGGTTGGTGAGCCACTTGATGTGGATTCTTAGAAC  382

seq1  TGCATTCAGGTCCTCTCTAAGACCTGCAAATGTTCCTAAATGTTGATCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCAGGTCCTCTCTAAGACCTGCAAATGTTCCTAAATGTTGATCCA  432

seq1  TCTTTCCAAACCCTGTAAACATATTCTTTACCTAAAATCTCCAACATCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAAACCCTGTAAACATATTCTTTACCTAAAATCTCCAACATCTA  482

seq1  CATATGGGGACATCCTCTTGTAGATGGTGAGAACAGAAGGAATGGGATGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGGGGACATCCTCTTGTAGATGGTGAGAACAGAAGGAATGGGATGA  532

seq1  AGAACTTTCAGAGAGCAGACCAGGAGAGGGATAATGAGTGGACTGTAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTCAGAGAGCAGACCAGGAGAGGGATAATGAGTGGACTGTAAAA  582

seq1  AACATTAAATATAATTTAAAAATATATCATAGAAATTTTATTAAAATATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAAATATAATTTAAAAATATATCATAGAAATTTTATTAAAATATT  632

seq1  GTACTAATTGAATAAATTATGAGTAGATATTACATTTTTAATTGAATCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAATTGAATAAATTATGAGTAGATATTACATTTTTAATTGAATCAT  682

seq1  ACCTGTAAAAGGATGTTTACACAAACAAATAAATATTATTGCAATTCAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAAAGGATGTTTACACAAACAAATAAATATTATTGCAATTCAGT  732

seq1  GGTATCCAAACTTCTGGCTAGAATTCATTTCAGCAGAAATTTAGCCCCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCAAACTTCTGGCTAGAATTCATTTCAGCAGAAATTTAGCCCCAT  782

seq1  GCAATCAATCTGGTCTTCTTATAATTTCCCAATGTTATTTTTGATTCAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCAATCTGGTCTTCTTATAATTTCCCAATGTTATTTTTGATTCAAA  832

seq1  CTACAACTCTACTTTTCAATATGTTTAATATCCCTTTCTATGCTTTGTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACTCTACTTTTCAATATGTTTAATATCCCTTTCTATGCTTTGTGA  882

seq1  TCCTTCCAGCACTTGTGCTGAAATTTGCCTTCTAGTATAGCACCATTTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCAGCACTTGTGCTGAAATTTGCCTTCTAGTATAGCACCATTTTG  932

seq1  TGGTAGGACCCTAAAGGGGTGAATAATTCATGAGTACCTCTTCTGAATAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGACCCTAAAGGGGTGAATAATTCATGAGTACCTCTTCTGAATAA  982

seq1  ATGAATCATGTTATCATAAGAAAGGGCTAGCTACCTTGAGAGTGAGTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCATGTTATCATAAGAAAGGGCTAGCTACCTTGAGAGTGAGTATT  1032

seq1  TTTAAAAGTGTTCGACCAAATTTCCAGCCTGTCTCATTCCTGCTTTTATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGTGTTCGACCAAATTTCCAGCCTGTCTCATTCCTGCTTTTATG  1082

seq1  TCTTCATAATACTAAATGCCAAACTGCACATGCTGCACTATGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATAATACTAAATGCCAAACTGCACATGCTGCACTATGAATTC  1129

seq1: chr7_62582132_62583379
seq2: B6Ng01-158B03.g_68_1286

seq1  GAATTCTTGTTTCCCAGCATGAAGAACTAGAACTATATTCTAGAAAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTCCCAGCATGAAGAACTAGAACTATATTCTAGAAAGAGC  50

seq1  CTTTCCTATTACTTGAAGTCCTGTAATATACAAAAGAAGGCTCATTCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTATTACTTGAAGTCCTGTAATATACAAAAGAAGGCTCATTCATT  100

seq1  ATTCTTTCTCTTCAATGTCAGATTGAAAAAAAAACCTTTAATTTATTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTCTCTTCAATGTCAGATTGAAAAAAAAACCTTTAATTTATTTAC  150

seq1  TTTTACTTAGTGCGGATCCTTTATAAAGTAAAGTAAGGAACTGAAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTAGTGCGGATCCTTTATAAAGTAAAGTAAGGAACTGAAATCAA  200

seq1  TCATGCAGAGAAGAACTGAGCATCAGTTTCTTGTGTGACCCACAAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAGAGAAGAACTGAGCATCAGTTTCTTGTGTGACCCACAAAATTT  250

seq1  AATGATCACAAAACTAATTAACATCCAAAATCTTCCAGGTTTAAAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCACAAAACTAATTAACATCCAAAATCTTCCAGGTTTAAAAGAAA  300

seq1  ATGTTTCTCAGGCTGTCTTCCTCAAGATATTTGCAAAACTCAGCTACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTCAGGCTGTCTTCCTCAAGATATTTGCAAAACTCAGCTACTCT  350

seq1  CCACAGAGAAGTGTGCAGAGTCTTAATTAGTCTTTGCTACAGCTGGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGAGAAGTGTGCAGAGTCTTAATTAGTCTTTGCTACAGCTGGACAA  400

seq1  TCAATCCAAAGAAATCATGTAAAACACTTGAGAGTTAAAACTGAATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCAAAGAAATCATGTAAAACACTTGAGAGTTAAAACTGAATATTC  450

seq1  CAGCTGTCCAGTGCTCTCTCTAAATTCCATAGAGCAGTTCATTCTCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCCAGTGCTCTCTCTAAATTCCATAGAGCAGTTCATTCTCTCTG  500

seq1  TAACGCAAGCATCTAAGTAAGCGGTTTCTATTCCCACAACATTAAAGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCAAGCATCTAAGTAAGCGGTTTCTATTCCCACAACATTAAAGATG  550

seq1  GTAGTGCGAGTGGGTCTAGGTAATGTGCTATGAAGTAACTTCTACATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCGAGTGGGTCTAGGTAATGTGCTATGAAGTAACTTCTACATTGA  600

seq1  AGGAAAGGTTTATATTCTACTGTCATAACCTTCAATATAGGAGATTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGTTTATATTCTACTGTCATAACCTTCAATATAGGAGATTGAAA  650

seq1  GTAGTAGGATATGTGTTACCACAGGCTACTAACATAGAGTTCCTCCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGGATATGTGTTACCACAGGCTACTAACATAGAGTTCCTCCTCTT  700

seq1  TAGATGAAGCAAGTTTCTTTCCTTGGCTTGCTGCTCAGTCATTCTATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAAGCAAGTTTCTTTCCTTGGCTTGCTGCTCAGTCATTCTATTCA  750

seq1  CCACTGGACTGTGAAAGAGGTAATCTCTCCCCTACAGCACCTTACTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGACTGTGAAAGAGGTAATCTCTCCCCTACAGCACCTTACTGCAG  800

seq1  TGTTGCTCAGAAGTGCCTGATAAAGGCAAGTTACAAGGAATATTGACAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCAGAAGTGCCTGATAAAGGCAAGTTACAAGGAATATTGACAAC  850

seq1  AACTATTCTAACCAACAACAATGACAAAAATTCATCTAATTTGCTATGAG  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AACTATTCTAACCAACAACAATGAC-AAAATTCATCTAATTTGCTATGAG  899

seq1  CTGCTGCCCTAAAAGTGGGAAATAGGCCAGAGGTCCAGATATCAGGAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCCTAAAAGTGGGAAATAGGCCAGAGGTCCAGATATCAGGAGCT  949

seq1  AGTTTAAGTAGCAAATGATCATTATCTCTTACACCTATCCAGGATCCTAT  1000
      ||||| |||||| |||||||||||||||||||| ||||||||||||||||
seq2  AGTTT-AGTAGC-AATGATCATTATCTCTTACA-CTATCCAGGATCCTAT  996

seq1  CTCATCCTGACAACTGACCATTCTTTGCGATGTTGGACAGCAACCTATCT  1050
      ||||||||||| ||||| ||||| |||||||||  |||||||  ||||||
seq2  CTCATCCTGAC-ACTGA-CATTC-TTGCGATGT--GACAGCA--CTATCT  1039

seq1  GTCATCTCAGCTCTATCGGGTCCAGGATAACCAGAGTGCTTTGTAACTCT  1100
      ||||||||||||||||||||| |||||||||||||| || ||||||| ||
seq2  GTCATCTCAGCTCTATCGGGT-CAGGATAACCAGAGGGC-TTGTAAC-CT  1086

seq1  GGTAGCCATAATCATTTTCCCTAAAATGTCTTTTA--TGTTCACCAATTA  1148
      |||||||  ||||||||| |||||||| |||||||  |||||||||| ||
seq2  GGTAGCCTAAATCATTTT-CCTAAAAT-TCTTTTATGTGTTCACCAA-TA  1133

seq1  GACCACATTTCCTTCTCAAGCCAATACATAGTTCCCTGTATCATGAAAAT  1198
      || |||  |||| |||| || | | || ||| ||| |   | |||     
seq2  GA-CACGATTCC-TCTCCAGGCCAAAC-TAG-TCCGTTACTGATG-----  1174

seq1  GATTCTCAGATGCCATATCCCATCAGAGCCTATGCATTTCT-CTTCTCCA  1247
       ||||   ||||||| || ||||| ||||    |||||||| ||||||||
seq2  CATTC---GATGCCA-AT-CCATC-GAGCAATGGCATTTCTCCTTCTCCA  1218

seq1  G  1248
      |
seq2  G  1219