BAC Information

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BAC

Clone NameB6Ng01-158F24
Chromosome7 (Build37)
Map Location 50,330,954 - 50,332,023
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612
Downstream geneLOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158F24.bB6Ng01-158F24.g
ACCDH952337DH952338
length1,0711,199
definitionDH952337|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F24, 5' end.DH952338|Mus musculus domesticus DNA, BAC clone: B6Ng01-158F24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacacccagggctacacagagaaactctgtctcaaaaaaca
aaaacaacaacaacaaaaatttaatttgggctggtaagatggctcagcgg
ttaagagagaaacgctgtctcgacaaacaaaaacaaaaaacacaaaaaaa
ttaatttgggctggtgagatggctcagcgcttaagagcgccagccaactg
ctcttccaaaggtactgagatcaaatccaagcaaccacatggtggctcac
aaccatccctaatgaaatctgatgccgtcttctggagtggagtgtctgaa
ggtggctacagtgtacttacatataataaataaataaataaataaataaa
taaataaataaatatttttttgaaaaaagaagaagaaatctcaactcttc
ctgctcatggctgcctgaacattgccatgctcctgccttgatgctaatgg
actgacctctgaacctgtaagccagccccaattaaatattctcctttcta
agatttaccttggtcataagttctgttcacagcagtaaatcccttcagcc
atctttctaatacttctcacgagcaccttcccatatctgagagctcacag
tgtccacatcgatcattatgcaggaaattgtactacacactttcctgcac
tacagtctgctgtatgaattttctgaagtgtgatttctccacggagaatg
atcagtttgctatttcaaatatatatatatgtatatattataatgcatat
ttatatattataattgacatcttgtcaacaaatacagcatcaccaaatgt
taacctttgctttttacattattctcaagattttatgttttatcataata
taacacagtccaactttgttataaaaagatttattggtttatttttatgt
atatgcgtacacaatagctgtcttcagacacatcagaagagggcatcaga
tctcaccaggtggttgtgagccaccatgtggttactgggaattgaactca
ggtcctctggtagagcgtcagtgcctcttggctgctgagcattttcttcc
aatcaacagttcaactttttt
gaattctctacctcatatggaagaacaaacactcccaggatagccaaaac
aatcctgaaccataaaggaacttctaaagcatcacacttcctcatctcaa
gctgtactacatagcaatagtgataaaaaaaacaaatgatatcagtacag
acaggaagatcagtggaatcgaatacccagaaatgaactcatacacctat
ggacaattcttaggcaaagaagcaaaaaccatacaatagaaaaagaaagc
atcgtgaacaaatgttctgatctaactggcagtgtgtatatagaagaatc
accctgcacaggatggatcaaggacctcacataaaaccagctacactgaa
tctaatagcagacaaagtaggaaatacccttgaacgcattggtacaggac
acagaatttcctgagcagaacatcaatggctcaggctctaagaccaacag
ttaatacatttcttgaaaatgaaaagcttctgtaagggagaggacactgt
caataggacaaaacagtagccaaaaactgagaaaagatgttcaccaaccc
tatagccaatagagggctaatatctaaaagttataaagatctcaaaaagt
tagatgccaaaaaaatcaaacaacctaattaaaaatgggatacagagcta
atcagaattctcaacagaggaagttcgaatgacctattgtagtggctatt
cctggttgtcaacttgacaatatttggaatgaactacaatccggaattgg
aaaggctcaccagtgacccttatcttgaggcttggagatccttatctgga
tcttggtttgaagatcttgagccatagtggctatggattccagaagatta
aatctctgagtttaaggaacacacctttaatctgggctatgccttcatct
gggataaaggtgtgtggaacacactgtgatctgggctacaccttctgctg
agacatataaggacattgagaaggagtctagctctgctctgctctcgctg
ctgctgctgatgctgagtaactgctagatctggactcattccaagcgcga
ctgagcatgttgggattggctgctgacgtaagtcatcaataaattcctta
cattcagaccattcatagtctgtgactggagacctggacttacacctaag
tatcgcagtcagtaatgtcatacgtgtgcgcatcgccagtaataggcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50330954_50332023
seq2: B6Ng01-158F24.b_44_1114

seq1  GAATTCCAGGACACCCAGGGCTACACAGAGAAACTCTGTCTCAAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACACCCAGGGCTACACAGAGAAACTCTGTCTCAAAAAACA  50

seq1  AAAACAACAACAACAAAAATTTAATTTGGGCTGGTAAGATGGCTCAGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAACAACAAAAATTTAATTTGGGCTGGTAAGATGGCTCAGCGG  100

seq1  TTAAGAGAGAAACGCTGTCTCGACAAACAAAAACAAAAAACACAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGAGAAACGCTGTCTCGACAAACAAAAACAAAAAACACAAAAAAA  150

seq1  TTAATTTGGGCTGGTGAGATGGCTCAGCGCTTAAGAGCGCCAGCCAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGGGCTGGTGAGATGGCTCAGCGCTTAAGAGCGCCAGCCAACTG  200

seq1  CTCTTCCAAAGGTACTGAGATCAAATCCAAGCAACCACATGGTGGCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCAAAGGTACTGAGATCAAATCCAAGCAACCACATGGTGGCTCAC  250

seq1  AACCATCCCTAATGAAATCTGATGCCGTCTTCTGGAGTGGAGTGTCTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCCCTAATGAAATCTGATGCCGTCTTCTGGAGTGGAGTGTCTGAA  300

seq1  GGTGGCTACAGTGTACTTACATATAATAAATAAATAAATAAATAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTACAGTGTACTTACATATAATAAATAAATAAATAAATAAATAAA  350

seq1  TAAATAAATAAATATTTTTTTGAAAAAAGAAGAAGAAATCTCAACTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAATATTTTTTTGAAAAAAGAAGAAGAAATCTCAACTCTTC  400

seq1  CTGCTCATGGCTGCCTGAACATTGCCATGCTCCTGCCTTGATGCTAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATGGCTGCCTGAACATTGCCATGCTCCTGCCTTGATGCTAATGG  450

seq1  ACTGACCTCTGAACCTGTAAGCCAGCCCCAATTAAATATTCTCCTTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCTCTGAACCTGTAAGCCAGCCCCAATTAAATATTCTCCTTTCTA  500

seq1  AGATTTACCTTGGTCATAAGTTCTGTTCACAGCAGTAAATCCCTTCAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACCTTGGTCATAAGTTCTGTTCACAGCAGTAAATCCCTTCAGCC  550

seq1  ATCTTTCTAATACTTCTCACGAGCACCTTCCCATATCTGAGAGCTCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTAATACTTCTCACGAGCACCTTCCCATATCTGAGAGCTCACAG  600

seq1  TGTCCACATCGATCATTATGCAGGAAATTGTACTACACACTTTCCTGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACATCGATCATTATGCAGGAAATTGTACTACACACTTTCCTGCAC  650

seq1  TACAGTCTGCTGTATGAATTTTCTGAAGTGTGATTTCTCCACGGAGAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCTGCTGTATGAATTTTCTGAAGTGTGATTTCTCCACGGAGAATG  700

seq1  ATCAGTTTGCTATTTCAAATATATATATATGTATATATTATAATGCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTGCTATTTCAAATATATATATATGTATATATTATAATGCATAT  750

seq1  TTATATATTATAATTGACATCTTGTCAACAAATACAGCATCACCAAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATATTATAATTGACATCTTGTCAACAAATACAGCATCACCAAATGT  800

seq1  TAACCTTTGCTTTTTACATTATTCTCAAGATTTTATGTTTTATCATAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTTGCTTTTTACATTATTCTCAAGATTTTATGTTTTATCATAATA  850

seq1  TAACACAGTCCAACTTTGTTATAAAAAGATTTATTGGTTTATTTTTATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGTCCAACTTTGTTATAAAAAGATTTATTGGTTTATTTTTATGT  900

seq1  ATATGCGTACACAATAGCTGTCTTCAGACACATCAGAAGAGGGCATCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCGTACACAATAGCTGTCTTCAGACACATCAGAAGAGGGCATCAGA  950

seq1  TCTCACCAGGTGGTTGTGAGCCACCATGTGGTTACTGGGAATTGAACTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCAGGTGGTTGTGAGCCACCATGTGGTTACTGGGAATTGAACTCA  1000

seq1  GGTCCTCTGGTAGAGCAGTCAGTG-CTCTTGGCTGCTGAGCCATCTC-TC  1048
      |||||||||||||||| ||||||| ||||||||||||||||  | || ||
seq2  GGTCCTCTGGTAGAGC-GTCAGTGCCTCTTGGCTGCTGAGCATTTTCTTC  1049

seq1  CAATCAACAGTCCAACTTTTTT  1070
      ||||||||||| ||||||||||
seq2  CAATCAACAGTTCAACTTTTTT  1071